Protein–RNA interactions for Protein: Q9H1A7

POLR2J3, DNA-directed RNA polymerase II subunit RPB11-b2, humanhuman

Known RBP Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3Q9H1A7 PHACTR3-202ENST00000359926 2252 ntTSL 2 BASIC20.06■□□□□ 0.8
POLR2J3Q9H1A7 DACH1-201ENST00000611519 4789 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
POLR2J3Q9H1A7 HADH-201ENST00000309522 1912 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
POLR2J3Q9H1A7 AC009126.1-201ENST00000501338 2245 ntTSL 2 BASIC20.06■□□□□ 0.8
POLR2J3Q9H1A7 CUL4A-209ENST00000488558 1111 ntTSL 3 BASIC20.06■□□□□ 0.8
POLR2J3Q9H1A7 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC20.06■□□□□ 0.8
POLR2J3Q9H1A7 WDR86-207ENST00000621812 1542 ntTSL 5 BASIC20.06■□□□□ 0.8
POLR2J3Q9H1A7 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
POLR2J3Q9H1A7 LCK-214ENST00000619559 2099 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
POLR2J3Q9H1A7 CDK5-204ENST00000485972 1758 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
POLR2J3Q9H1A7 CCNG2-204ENST00000502280 1459 ntAPPRIS P1 TSL 2 BASIC20.05■□□□□ 0.8
POLR2J3Q9H1A7 ASAP2-202ENST00000315273 5582 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
POLR2J3Q9H1A7 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC20.05■□□□□ 0.8
POLR2J3Q9H1A7 CRYAA-201ENST00000291554 1139 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
POLR2J3Q9H1A7 BAD-203ENST00000394532 1157 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
POLR2J3Q9H1A7 TSPY9P-201ENST00000440215 945 ntBASIC20.05■□□□□ 0.8
POLR2J3Q9H1A7 TSPY11P-201ENST00000442607 1045 ntBASIC20.05■□□□□ 0.8
POLR2J3Q9H1A7 AC092343.1-201ENST00000500224 729 ntTSL 3 BASIC20.05■□□□□ 0.8
POLR2J3Q9H1A7 AC241377.3-202ENST00000626088 1088 ntBASIC20.05■□□□□ 0.8
POLR2J3Q9H1A7 AC241585.3-202ENST00000628937 1088 ntBASIC20.05■□□□□ 0.8
POLR2J3Q9H1A7 AC245100.8-202ENST00000629247 1058 ntBASIC20.05■□□□□ 0.8
POLR2J3Q9H1A7 PLPP7-202ENST00000372264 2095 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
POLR2J3Q9H1A7 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
POLR2J3Q9H1A7 C11orf63-201ENST00000227349 3147 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
POLR2J3Q9H1A7 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
POLR2J3Q9H1A7 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC20.05■□□□□ 0.8
POLR2J3Q9H1A7 AC090377.1-201ENST00000585691 1762 ntTSL 3 BASIC20.05■□□□□ 0.8
POLR2J3Q9H1A7 HOXB7-201ENST00000239165 1371 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
POLR2J3Q9H1A7 OAS3-205ENST00000548514 1392 ntTSL 2 BASIC20.05■□□□□ 0.8
POLR2J3Q9H1A7 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC20.05■□□□□ 0.8
POLR2J3Q9H1A7 AOC3-207ENST00000617500 2392 ntTSL 4 BASIC20.05■□□□□ 0.8
POLR2J3Q9H1A7 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC20.05■□□□□ 0.8
POLR2J3Q9H1A7 AC092490.1-203ENST00000514568 1972 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
POLR2J3Q9H1A7 RBAK-202ENST00000396912 6551 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
POLR2J3Q9H1A7 PSMD7-201ENST00000219313 1670 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
POLR2J3Q9H1A7 ZBED3-201ENST00000255198 6172 ntAPPRIS P2 TSL 1 (best) BASIC20.04■□□□□ 0.8
POLR2J3Q9H1A7 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
POLR2J3Q9H1A7 TMEM218-209ENST00000529583 848 ntAPPRIS P1 TSL 3 BASIC20.04■□□□□ 0.8
POLR2J3Q9H1A7 ING1-201ENST00000333219 5119 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
POLR2J3Q9H1A7 SCAND1-202ENST00000373991 1727 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
POLR2J3Q9H1A7 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC20.04■□□□□ 0.8
POLR2J3Q9H1A7 IGFBP1-201ENST00000275525 1653 ntAPPRIS P2 TSL 1 (best) BASIC20.03■□□□□ 0.8
POLR2J3Q9H1A7 KCNN1-204ENST00000615435 1691 ntAPPRIS ALT1 TSL 5 BASIC20.03■□□□□ 0.8
POLR2J3Q9H1A7 MIR222HG-202ENST00000602507 1758 ntTSL 5 BASIC20.03■□□□□ 0.8
POLR2J3Q9H1A7 SPAG16-201ENST00000272898 1059 ntTSL 5 BASIC20.03■□□□□ 0.8
POLR2J3Q9H1A7 AL117332.1-201ENST00000622628 974 ntBASIC20.03■□□□□ 0.8
POLR2J3Q9H1A7 ST3GAL4-215ENST00000532243 1825 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
POLR2J3Q9H1A7 C16orf58-209ENST00000567994 1845 ntTSL 5 BASIC20.03■□□□□ 0.8
POLR2J3Q9H1A7 MXRA8-203ENST00000445648 2001 ntTSL 2 BASIC20.03■□□□□ 0.8
POLR2J3Q9H1A7 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC20.03■□□□□ 0.8
POLR2J3Q9H1A7 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
POLR2J3Q9H1A7 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC20.03■□□□□ 0.8
POLR2J3Q9H1A7 PKIG-206ENST00000372892 1338 ntAPPRIS P1 TSL 2 BASIC20.02■□□□□ 0.8
POLR2J3Q9H1A7 ARPP19-201ENST00000249822 5301 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
POLR2J3Q9H1A7 C7orf25-201ENST00000350427 2451 ntAPPRIS P1 TSL 2 BASIC20.02■□□□□ 0.8
POLR2J3Q9H1A7 RPS6KA2-201ENST00000265678 5824 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
POLR2J3Q9H1A7 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
POLR2J3Q9H1A7 TBC1D22A-206ENST00000407381 1949 ntTSL 5 BASIC20.02■□□□□ 0.8
POLR2J3Q9H1A7 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC20.02■□□□□ 0.8
POLR2J3Q9H1A7 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC20.02■□□□□ 0.8
POLR2J3Q9H1A7 AP001267.3-203ENST00000554407 579 ntTSL 2 BASIC20.02■□□□□ 0.8
POLR2J3Q9H1A7 AL451085.2-201ENST00000605085 799 ntBASIC20.02■□□□□ 0.8
POLR2J3Q9H1A7 ZNF669-201ENST00000343381 1951 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.8
POLR2J3Q9H1A7 FAHD1-201ENST00000382666 1964 ntTSL 2 BASIC20.02■□□□□ 0.8
POLR2J3Q9H1A7 PEX10-202ENST00000447513 1997 ntAPPRIS P2 TSL 1 (best) BASIC20.02■□□□□ 0.8
POLR2J3Q9H1A7 ZIM2-201ENST00000593711 2083 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
POLR2J3Q9H1A7 MESP1-201ENST00000300057 2369 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
POLR2J3Q9H1A7 RUFY1-201ENST00000319449 2646 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.79
POLR2J3Q9H1A7 GTPBP6-201ENST00000326153 1907 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
POLR2J3Q9H1A7 BRSK2-212ENST00000531197 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
POLR2J3Q9H1A7 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
POLR2J3Q9H1A7 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
POLR2J3Q9H1A7 GMPPB-202ENST00000308388 1582 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
POLR2J3Q9H1A7 SDC3-202ENST00000339394 1580 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
POLR2J3Q9H1A7 EEF1D-203ENST00000419152 1452 ntAPPRIS ALT2 TSL 5 BASIC20.01■□□□□ 0.79
POLR2J3Q9H1A7 ATP8A1-207ENST00000510289 2238 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
POLR2J3Q9H1A7 CLPSL2-202ENST00000403376 405 ntAPPRIS P3 TSL 1 (best) BASIC20.01■□□□□ 0.79
POLR2J3Q9H1A7 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
POLR2J3Q9H1A7 BTBD17-201ENST00000375366 1805 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
POLR2J3Q9H1A7 MXRA8-201ENST00000309212 2273 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
POLR2J3Q9H1A7 PMPCA-201ENST00000371717 2174 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
POLR2J3Q9H1A7 THOC6-202ENST00000326266 1419 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
POLR2J3Q9H1A7 STK19-202ENST00000375333 1557 ntAPPRIS P3 TSL 1 (best) BASIC20■□□□□ 0.79
POLR2J3Q9H1A7 LOXL1-AS1-210ENST00000567257 2358 ntTSL 2 BASIC20■□□□□ 0.79
POLR2J3Q9H1A7 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC20■□□□□ 0.79
POLR2J3Q9H1A7 PNMT-201ENST00000269582 1253 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
POLR2J3Q9H1A7 AC136475.3-202ENST00000534742 812 ntTSL 2 BASIC20■□□□□ 0.79
POLR2J3Q9H1A7 UQCR11-202ENST00000589880 504 ntAPPRIS P1 TSL 3 BASIC20■□□□□ 0.79
POLR2J3Q9H1A7 MAPK9-202ENST00000347470 1509 ntTSL 5 BASIC20■□□□□ 0.79
POLR2J3Q9H1A7 AC026310.3-201ENST00000625186 2373 ntBASIC20■□□□□ 0.79
POLR2J3Q9H1A7 SPN-202ENST00000395389 1935 ntAPPRIS P2 TSL 1 (best) BASIC20■□□□□ 0.79
POLR2J3Q9H1A7 AC010542.4-201ENST00000563151 1910 ntBASIC20■□□□□ 0.79
POLR2J3Q9H1A7 RBMS1-205ENST00000409972 1815 ntTSL 5 BASIC19.99■□□□□ 0.79
POLR2J3Q9H1A7 APLP1-203ENST00000586861 2052 ntTSL 2 BASIC19.99■□□□□ 0.79
POLR2J3Q9H1A7 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC19.99■□□□□ 0.79
POLR2J3Q9H1A7 HNRNPAB-201ENST00000355836 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
POLR2J3Q9H1A7 NAGPA-202ENST00000381955 2100 ntTSL 5 BASIC19.99■□□□□ 0.79
POLR2J3Q9H1A7 KIAA0895-204ENST00000415803 2865 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
POLR2J3Q9H1A7 SNX21-212ENST00000491381 1607 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
POLR2J3Q9H1A7 E2F1-201ENST00000343380 2503 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 73.1 ms