Protein–RNA interactions for Protein: Q9H0F5

RNF38, E3 ubiquitin-protein ligase RNF38, humanhuman

Predictions only

Length 515 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF38Q9H0F5 AL391650.1-201ENST00000448923 1468 ntAPPRIS P1 TSL 2 BASIC22.65■■□□□ 1.22
RNF38Q9H0F5 TMEM44-202ENST00000347147 2245 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
RNF38Q9H0F5 PGF-206ENST00000555567 1927 ntAPPRIS P3 TSL 1 (best) BASIC22.65■■□□□ 1.22
RNF38Q9H0F5 CUEDC1-202ENST00000407144 2190 ntAPPRIS P1 TSL 5 BASIC22.65■■□□□ 1.22
RNF38Q9H0F5 KRTAP17-1-201ENST00000334202 779 ntAPPRIS P1 BASIC22.64■■□□□ 1.21
RNF38Q9H0F5 IL15RA-201ENST00000379971 588 ntTSL 3 BASIC22.64■■□□□ 1.21
RNF38Q9H0F5 C16orf86-201ENST00000403458 1267 ntAPPRIS P2 TSL 1 (best) BASIC22.64■■□□□ 1.21
RNF38Q9H0F5 CDYL-203ENST00000397588 2184 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
RNF38Q9H0F5 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC22.64■■□□□ 1.21
RNF38Q9H0F5 ZFAND4-205ENST00000374371 2283 ntTSL 5 BASIC22.64■■□□□ 1.21
RNF38Q9H0F5 ST7-201ENST00000265437 2899 ntTSL 1 (best) BASIC22.64■■□□□ 1.21
RNF38Q9H0F5 MME-202ENST00000382989 1319 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
RNF38Q9H0F5 STAP2-206ENST00000600324 1508 ntAPPRIS P3 TSL 2 BASIC22.63■■□□□ 1.21
RNF38Q9H0F5 MAP6D1-201ENST00000318631 2111 ntAPPRIS P2 TSL 1 (best) BASIC22.63■■□□□ 1.21
RNF38Q9H0F5 DLL3-201ENST00000205143 2332 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
RNF38Q9H0F5 FOSL1-201ENST00000312562 1669 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
RNF38Q9H0F5 RAB28-208ENST00000630951 1679 ntTSL 5 BASIC22.63■■□□□ 1.21
RNF38Q9H0F5 GZMM-201ENST00000264553 940 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
RNF38Q9H0F5 ARHGAP24-206ENST00000503995 1273 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
RNF38Q9H0F5 ZFPL1-203ENST00000525509 478 ntTSL 2 BASIC22.63■■□□□ 1.21
RNF38Q9H0F5 AL137784.2-201ENST00000607332 1000 ntBASIC22.63■■□□□ 1.21
RNF38Q9H0F5 GNB1-210ENST00000615252 3048 ntTSL 5 BASIC22.63■■□□□ 1.21
RNF38Q9H0F5 C7orf25-203ENST00000431882 1645 ntTSL 2 BASIC22.63■■□□□ 1.21
RNF38Q9H0F5 EPM2A-209ENST00000638262 2679 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
RNF38Q9H0F5 INPP1-201ENST00000322522 1919 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
RNF38Q9H0F5 P3H3-201ENST00000290510 2632 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
RNF38Q9H0F5 OSCAR-201ENST00000284648 2055 ntAPPRIS ALT2 TSL 1 (best) BASIC22.62■■□□□ 1.21
RNF38Q9H0F5 ADSS-201ENST00000366535 2780 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
RNF38Q9H0F5 PCDH1-204ENST00000503492 2373 ntTSL 5 BASIC22.62■■□□□ 1.21
RNF38Q9H0F5 TMCC2-209ENST00000637895 1455 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
RNF38Q9H0F5 FAHD1-201ENST00000382666 1964 ntTSL 2 BASIC22.62■■□□□ 1.21
RNF38Q9H0F5 MBOAT7-205ENST00000431666 2471 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
RNF38Q9H0F5 TNFRSF18-202ENST00000379265 705 ntAPPRIS ALT2 TSL 1 (best) BASIC22.62■■□□□ 1.21
RNF38Q9H0F5 FNDC3B-204ENST00000421757 946 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
RNF38Q9H0F5 SUZ12P1-202ENST00000578070 929 ntTSL 5 BASIC22.62■■□□□ 1.21
RNF38Q9H0F5 DISC1-224ENST00000639374 1071 ntAPPRIS ALT2 TSL 1 (best) BASIC22.62■■□□□ 1.21
RNF38Q9H0F5 WDR86-208ENST00000628331 1905 ntTSL 5 BASIC22.62■■□□□ 1.21
RNF38Q9H0F5 LTK-203ENST00000453182 2412 ntTSL 2 BASIC22.62■■□□□ 1.21
RNF38Q9H0F5 PRR35-201ENST00000409413 2216 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
RNF38Q9H0F5 SAXO1-201ENST00000380530 1727 ntAPPRIS ALT2 TSL 2 BASIC22.62■■□□□ 1.21
RNF38Q9H0F5 CACNB1-201ENST00000344140 1889 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
RNF38Q9H0F5 HORMAD2-201ENST00000336726 2187 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
RNF38Q9H0F5 PCYT2-201ENST00000331285 2147 ntTSL 2 BASIC22.61■■□□□ 1.21
RNF38Q9H0F5 DBP-201ENST00000222122 2229 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
RNF38Q9H0F5 PYCR3-203ENST00000433751 1000 ntAPPRIS ALT2 TSL 2 BASIC22.61■■□□□ 1.21
RNF38Q9H0F5 GABARAPL2-205ENST00000568455 646 ntTSL 3 BASIC22.61■■□□□ 1.21
RNF38Q9H0F5 AC011825.4-201ENST00000582233 473 ntTSL 2 BASIC22.61■■□□□ 1.21
RNF38Q9H0F5 RAX2-202ENST00000555978 2145 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
RNF38Q9H0F5 RASL12-202ENST00000421977 1523 ntTSL 2 BASIC22.61■■□□□ 1.21
RNF38Q9H0F5 RAB24-202ENST00000303270 1385 ntTSL 2 BASIC22.61■■□□□ 1.21
RNF38Q9H0F5 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC22.61■■□□□ 1.21
RNF38Q9H0F5 NECTIN2-202ENST00000252485 2112 ntAPPRIS P3 TSL 1 (best) BASIC22.6■■□□□ 1.21
RNF38Q9H0F5 NDUFB2-207ENST00000465506 1101 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
RNF38Q9H0F5 AC012414.4-201ENST00000560839 1074 ntTSL 5 BASIC22.6■■□□□ 1.21
RNF38Q9H0F5 IMPA2-212ENST00000625802 500 ntTSL 2 BASIC22.6■■□□□ 1.21
RNF38Q9H0F5 AC060814.5-201ENST00000630916 1074 ntTSL 2 BASIC22.6■■□□□ 1.21
RNF38Q9H0F5 CCDC151-203ENST00000591179 1943 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
RNF38Q9H0F5 TMEM121-201ENST00000392519 1532 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
RNF38Q9H0F5 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC22.6■■□□□ 1.21
RNF38Q9H0F5 RPS6-203ENST00000380384 1355 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
RNF38Q9H0F5 FMR1-AS1-201ENST00000594922 2005 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
RNF38Q9H0F5 PHLDB3-207ENST00000599242 2286 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
RNF38Q9H0F5 MAIP1-201ENST00000295079 1495 ntAPPRIS P2 TSL 2 BASIC22.6■■□□□ 1.21
RNF38Q9H0F5 AP004607.4-201ENST00000530158 1459 ntBASIC22.6■■□□□ 1.21
RNF38Q9H0F5 KLHL36-201ENST00000258157 1974 ntTSL 1 (best) BASIC22.59■■□□□ 1.21
RNF38Q9H0F5 STK32C-201ENST00000298630 2086 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
RNF38Q9H0F5 TMEM44-211ENST00000473092 1508 ntTSL 1 (best) BASIC22.59■■□□□ 1.21
RNF38Q9H0F5 ACYP2-201ENST00000303536 789 ntTSL 2 BASIC22.59■■□□□ 1.21
RNF38Q9H0F5 AC068385.1-201ENST00000533218 409 ntTSL 3 BASIC22.59■■□□□ 1.21
RNF38Q9H0F5 GATS-205ENST00000436886 2726 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
RNF38Q9H0F5 FAM86JP-203ENST00000485843 2012 ntTSL 1 (best) BASIC22.58■■□□□ 1.21
RNF38Q9H0F5 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
RNF38Q9H0F5 ROR1-202ENST00000371080 2305 ntTSL 1 (best) BASIC22.58■■□□□ 1.21
RNF38Q9H0F5 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC22.58■■□□□ 1.21
RNF38Q9H0F5 ATP5G2-208ENST00000552242 1950 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
RNF38Q9H0F5 NFKBIB-201ENST00000313582 1159 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
RNF38Q9H0F5 MPRIP-203ENST00000395806 527 ntTSL 3 BASIC22.58■■□□□ 1.21
RNF38Q9H0F5 AC004911.1-201ENST00000416316 871 ntBASIC22.58■■□□□ 1.21
RNF38Q9H0F5 FAM66D-201ENST00000434078 918 ntTSL 5 BASIC22.58■■□□□ 1.21
RNF38Q9H0F5 ASRGL1-210ENST00000534571 639 ntTSL 2 BASIC22.58■■□□□ 1.21
RNF38Q9H0F5 MFSD7-203ENST00000404286 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC22.58■■□□□ 1.21
RNF38Q9H0F5 WDR86-201ENST00000334493 2023 ntAPPRIS P1 TSL 5 BASIC22.58■■□□□ 1.2
RNF38Q9H0F5 NOXA1-202ENST00000392815 1464 ntTSL 1 (best) BASIC22.58■■□□□ 1.2
RNF38Q9H0F5 SNF8-202ENST00000502492 2319 ntAPPRIS P3 TSL 1 (best) BASIC22.58■■□□□ 1.2
RNF38Q9H0F5 NFE2L3P1-201ENST00000588207 1959 ntBASIC22.58■■□□□ 1.2
RNF38Q9H0F5 ILKAP-211ENST00000612675 1335 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
RNF38Q9H0F5 C21orf2-203ENST00000397956 1634 ntAPPRIS ALT2 TSL 1 (best) BASIC22.57■■□□□ 1.2
RNF38Q9H0F5 ME3-201ENST00000323418 1068 ntTSL 5 BASIC22.57■■□□□ 1.2
RNF38Q9H0F5 COX20-201ENST00000366528 568 ntTSL 2 BASIC22.57■■□□□ 1.2
RNF38Q9H0F5 ADAMTS13-204ENST00000371911 1155 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
RNF38Q9H0F5 IDNK-204ENST00000454393 1210 ntTSL 3 BASIC22.57■■□□□ 1.2
RNF38Q9H0F5 AC127029.2-201ENST00000577329 502 ntTSL 3 BASIC22.57■■□□□ 1.2
RNF38Q9H0F5 AC007773.1-201ENST00000592680 972 ntTSL 2 BASIC22.57■■□□□ 1.2
RNF38Q9H0F5 RARRES2P11-201ENST00000635158 484 ntBASIC22.57■■□□□ 1.2
RNF38Q9H0F5 ZDHHC7-203ENST00000564466 1488 ntTSL 5 BASIC22.57■■□□□ 1.2
RNF38Q9H0F5 TANGO2-210ENST00000432883 2084 ntTSL 2 BASIC22.57■■□□□ 1.2
RNF38Q9H0F5 ARL2-SNX15-201ENST00000301886 2392 ntAPPRIS P1 TSL 2 BASIC22.57■■□□□ 1.2
RNF38Q9H0F5 ABHD12B-201ENST00000337334 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC22.57■■□□□ 1.2
RNF38Q9H0F5 AC004854.2-201ENST00000608450 1441 ntBASIC22.57■■□□□ 1.2
RNF38Q9H0F5 ABHD6-205ENST00000478253 2482 ntAPPRIS P1 TSL 2 BASIC22.56■■□□□ 1.2
Retrieved 100 of 98,524 protein–RNA pairs in 19 ms