Protein–RNA interactions for Protein: Q9BSH3

NICN1, Nicolin-1, humanhuman

Predictions only

Length 213 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NICN1Q9BSH3 IGFBP7-203ENST00000514062 1251 ntAPPRIS ALT2 TSL 2 BASIC18.64■□□□□ 0.57
NICN1Q9BSH3 MIR6722-201ENST00000617286 78 ntBASIC18.64■□□□□ 0.57
NICN1Q9BSH3 TRADD-202ENST00000486556 1833 ntTSL 2 BASIC18.64■□□□□ 0.57
NICN1Q9BSH3 OSCAR-203ENST00000356532 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
NICN1Q9BSH3 OSCAR-204ENST00000358375 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
NICN1Q9BSH3 GPR6-202ENST00000414000 1945 ntTSL 2 BASIC18.64■□□□□ 0.57
NICN1Q9BSH3 OSCAR-210ENST00000616447 1358 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.57
NICN1Q9BSH3 COMT-206ENST00000407537 1457 ntAPPRIS P3 TSL 5 BASIC18.64■□□□□ 0.57
NICN1Q9BSH3 PHF7-201ENST00000327906 2130 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
NICN1Q9BSH3 DNAJA4-202ENST00000394852 3116 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
NICN1Q9BSH3 AC092384.1-201ENST00000378347 1812 ntTSL 2 BASIC18.63■□□□□ 0.57
NICN1Q9BSH3 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
NICN1Q9BSH3 TFG-201ENST00000240851 1978 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
NICN1Q9BSH3 ST20-MTHFS-201ENST00000479961 859 ntAPPRIS P1 TSL 3 BASIC18.63■□□□□ 0.57
NICN1Q9BSH3 FBXO27-202ENST00000509137 2130 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
NICN1Q9BSH3 ZNF180-205ENST00000587047 525 ntTSL 4 BASIC18.63■□□□□ 0.57
NICN1Q9BSH3 AL031848.2-201ENST00000607670 837 ntBASIC18.63■□□□□ 0.57
NICN1Q9BSH3 TEAD2-201ENST00000311227 2164 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
NICN1Q9BSH3 SLC16A10-202ENST00000368851 2508 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
NICN1Q9BSH3 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
NICN1Q9BSH3 C1QTNF4-201ENST00000302514 1664 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
NICN1Q9BSH3 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
NICN1Q9BSH3 EIF2B4-211ENST00000616081 1754 ntTSL 5 BASIC18.63■□□□□ 0.57
NICN1Q9BSH3 AC092490.1-203ENST00000514568 1972 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
NICN1Q9BSH3 DENND6A-201ENST00000311128 4655 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
NICN1Q9BSH3 ACHE-201ENST00000241069 2172 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
NICN1Q9BSH3 KCNN4-201ENST00000262888 2240 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
NICN1Q9BSH3 FBXO25-202ENST00000350302 2229 ntAPPRIS ALT1 TSL 1 (best) BASIC18.62■□□□□ 0.57
NICN1Q9BSH3 PTDSS2-201ENST00000308020 2445 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
NICN1Q9BSH3 CIZ1-206ENST00000372954 2731 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
NICN1Q9BSH3 RFLNA-202ENST00000338359 652 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
NICN1Q9BSH3 AC090587.2-201ENST00000430222 527 ntTSL 2 BASIC18.62■□□□□ 0.57
NICN1Q9BSH3 CLTA-206ENST00000466396 695 ntTSL 2 BASIC18.62■□□□□ 0.57
NICN1Q9BSH3 DUX4L4-201ENST00000566884 1269 ntBASIC18.62■□□□□ 0.57
NICN1Q9BSH3 AC009163.4-201ENST00000567194 530 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
NICN1Q9BSH3 FOSL1-202ENST00000448083 1427 ntTSL 2 BASIC18.62■□□□□ 0.57
NICN1Q9BSH3 AC096677.1-201ENST00000454651 1516 ntTSL 2 BASIC18.62■□□□□ 0.57
NICN1Q9BSH3 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
NICN1Q9BSH3 AC004687.1-201ENST00000579003 1625 ntBASIC18.62■□□□□ 0.57
NICN1Q9BSH3 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC18.62■□□□□ 0.57
NICN1Q9BSH3 ZBTB7A-201ENST00000322357 5422 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
NICN1Q9BSH3 MEF2A-202ENST00000354410 5824 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
NICN1Q9BSH3 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC18.61■□□□□ 0.57
NICN1Q9BSH3 DPF1-217ENST00000614244 2356 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
NICN1Q9BSH3 MIR222HG-202ENST00000602507 1758 ntTSL 5 BASIC18.61■□□□□ 0.57
NICN1Q9BSH3 SLC41A3-202ENST00000346785 1705 ntTSL 2 BASIC18.61■□□□□ 0.57
NICN1Q9BSH3 HSD11B1L-203ENST00000342970 1620 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
NICN1Q9BSH3 ZPBP2-201ENST00000348931 1543 ntAPPRIS P4 TSL 1 (best) BASIC18.61■□□□□ 0.57
NICN1Q9BSH3 UBA5-208ENST00000473651 1513 ntTSL 5 BASIC18.61■□□□□ 0.57
NICN1Q9BSH3 CCNG2-204ENST00000502280 1459 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
NICN1Q9BSH3 AC021242.3-201ENST00000607598 1377 ntBASIC18.61■□□□□ 0.57
NICN1Q9BSH3 PPP4C-214ENST00000627746 1301 ntTSL 5 BASIC18.61■□□□□ 0.57
NICN1Q9BSH3 MZT2B-201ENST00000281871 933 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
NICN1Q9BSH3 MZT2A-201ENST00000309451 624 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
NICN1Q9BSH3 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
NICN1Q9BSH3 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
NICN1Q9BSH3 TOP1MT-201ENST00000329245 1958 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
NICN1Q9BSH3 PWWP2A-205ENST00000523662 1819 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
NICN1Q9BSH3 AL353743.1-201ENST00000637846 1769 ntTSL 5 BASIC18.6■□□□□ 0.57
NICN1Q9BSH3 KPTN-201ENST00000338134 1691 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
NICN1Q9BSH3 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC18.6■□□□□ 0.57
NICN1Q9BSH3 BOD1-202ENST00000311086 1562 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
NICN1Q9BSH3 AC138028.2-201ENST00000440406 1539 ntTSL 2 BASIC18.6■□□□□ 0.57
NICN1Q9BSH3 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
NICN1Q9BSH3 DBP-201ENST00000222122 2229 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
NICN1Q9BSH3 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC18.6■□□□□ 0.57
NICN1Q9BSH3 P4HTM-202ENST00000383729 2127 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
NICN1Q9BSH3 AL355490.1-201ENST00000445808 805 ntTSL 3 BASIC18.6■□□□□ 0.57
NICN1Q9BSH3 AC080112.2-201ENST00000578774 2094 ntTSL 4 BASIC18.6■□□□□ 0.57
NICN1Q9BSH3 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC18.6■□□□□ 0.57
NICN1Q9BSH3 TRH-201ENST00000302649 1978 ntAPPRIS P2 TSL 1 (best) BASIC18.59■□□□□ 0.57
NICN1Q9BSH3 JMJD1C-AS1-201ENST00000609436 1335 ntBASIC18.59■□□□□ 0.57
NICN1Q9BSH3 IRX4-206ENST00000513692 2391 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
NICN1Q9BSH3 CERS4-205ENST00000558331 1803 ntTSL 5 BASIC18.59■□□□□ 0.57
NICN1Q9BSH3 NKILA-201ENST00000613231 537 ntTSL 4 BASIC18.59■□□□□ 0.57
NICN1Q9BSH3 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC18.59■□□□□ 0.57
NICN1Q9BSH3 UBE2K-201ENST00000261427 5245 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
NICN1Q9BSH3 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
NICN1Q9BSH3 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC18.59■□□□□ 0.57
NICN1Q9BSH3 OSBPL5-208ENST00000478260 2653 ntTSL 2 BASIC18.58■□□□□ 0.57
NICN1Q9BSH3 BTBD17-201ENST00000375366 1805 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
NICN1Q9BSH3 CBWD2-203ENST00000416503 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.57
NICN1Q9BSH3 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.57
NICN1Q9BSH3 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC18.58■□□□□ 0.56
NICN1Q9BSH3 CHAC1-201ENST00000444189 1204 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
NICN1Q9BSH3 AC026785.2-201ENST00000511821 867 ntTSL 2 BASIC18.58■□□□□ 0.56
NICN1Q9BSH3 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC18.58■□□□□ 0.56
NICN1Q9BSH3 THEM6-201ENST00000336138 2259 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
NICN1Q9BSH3 PALM-208ENST00000592155 2272 ntTSL 4 BASIC18.58■□□□□ 0.56
NICN1Q9BSH3 DISC1-205ENST00000366636 2224 ntAPPRIS P4 TSL 1 (best) BASIC18.58■□□□□ 0.56
NICN1Q9BSH3 H1FX-201ENST00000333762 1507 ntAPPRIS P1 BASIC18.58■□□□□ 0.56
NICN1Q9BSH3 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC18.58■□□□□ 0.56
NICN1Q9BSH3 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC18.58■□□□□ 0.56
NICN1Q9BSH3 RBM42-206ENST00000592202 1469 ntTSL 5 BASIC18.58■□□□□ 0.56
NICN1Q9BSH3 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC18.58■□□□□ 0.56
NICN1Q9BSH3 ZNF510-203ENST00000375231 5616 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
NICN1Q9BSH3 CFP-202ENST00000377005 1435 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
NICN1Q9BSH3 SOX17-201ENST00000297316 2342 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
NICN1Q9BSH3 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
NICN1Q9BSH3 SH2D5-202ENST00000444387 1934 ntAPPRIS P1 TSL 2 BASIC18.57■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 40.7 ms