Protein–RNA interactions for Protein: Q99741

CDC6, Cell division control protein 6 homolog, humanhuman

Predictions only

Length 560 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC6Q99741 NELFB-201ENST00000343053 2698 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
CDC6Q99741 IRF3-201ENST00000309877 1691 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
CDC6Q99741 GTPBP3-203ENST00000361619 1894 ntTSL 2 BASIC21.12■□□□□ 0.97
CDC6Q99741 METTL15-202ENST00000403099 795 ntTSL 5 BASIC21.12■□□□□ 0.97
CDC6Q99741 EIF5A-205ENST00000419711 1271 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
CDC6Q99741 NDUFS3-207ENST00000529276 558 ntTSL 2 BASIC21.12■□□□□ 0.97
CDC6Q99741 ABCC6P2-202ENST00000542005 706 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
CDC6Q99741 DDN-AS1-201ENST00000547395 858 ntTSL 2 BASIC21.12■□□□□ 0.97
CDC6Q99741 ABCC6-204ENST00000575728 714 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
CDC6Q99741 AC018730.2-201ENST00000598623 443 ntTSL 5 BASIC21.12■□□□□ 0.97
CDC6Q99741 SLC35A3-218ENST00000639994 1114 ntTSL 5 BASIC21.12■□□□□ 0.97
CDC6Q99741 ARHGEF35-201ENST00000378115 2431 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
CDC6Q99741 OTUD5-203ENST00000396743 2682 ntAPPRIS ALT1 TSL 1 (best) BASIC21.12■□□□□ 0.97
CDC6Q99741 SDR39U1-208ENST00000554698 1364 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
CDC6Q99741 ASCC1-204ENST00000394915 1510 ntTSL 5 BASIC21.11■□□□□ 0.97
CDC6Q99741 CEBPB-201ENST00000303004 1956 ntAPPRIS P1 BASIC21.11■□□□□ 0.97
CDC6Q99741 CHPF-202ENST00000373891 1079 ntTSL 2 BASIC21.11■□□□□ 0.97
CDC6Q99741 LINC01117-201ENST00000443670 699 ntTSL 5 BASIC21.11■□□□□ 0.97
CDC6Q99741 RAB6B-203ENST00000469959 500 ntTSL 3 BASIC21.11■□□□□ 0.97
CDC6Q99741 ABHD14A-204ENST00000491470 674 ntTSL 3 BASIC21.11■□□□□ 0.97
CDC6Q99741 SCO2-203ENST00000535425 1002 ntAPPRIS P1 TSL 2 BASIC21.11■□□□□ 0.97
CDC6Q99741 MVB12A-212ENST00000543795 1154 ntAPPRIS P1 TSL 5 BASIC21.11■□□□□ 0.97
CDC6Q99741 KLF13-207ENST00000560473 489 ntTSL 3 BASIC21.11■□□□□ 0.97
CDC6Q99741 CTU2-201ENST00000312060 1672 ntAPPRIS P3 TSL 5 BASIC21.11■□□□□ 0.97
CDC6Q99741 FOSL1-201ENST00000312562 1669 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
CDC6Q99741 ENTPD4-201ENST00000356206 2097 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
CDC6Q99741 ENTPD4-203ENST00000417069 2063 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
CDC6Q99741 FAM57A-202ENST00000308278 2412 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
CDC6Q99741 AC096677.1-201ENST00000454651 1516 ntTSL 2 BASIC21.1■□□□□ 0.97
CDC6Q99741 SLC15A3-201ENST00000227880 2115 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
CDC6Q99741 FOXP4-203ENST00000373060 5948 ntTSL 5 BASIC21.1■□□□□ 0.97
CDC6Q99741 FOXP4-204ENST00000373063 5910 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
CDC6Q99741 PDIA2-201ENST00000219406 1698 ntAPPRIS P2 TSL 1 (best) BASIC21.1■□□□□ 0.97
CDC6Q99741 AC005224.4-201ENST00000583262 1652 ntBASIC21.1■□□□□ 0.97
CDC6Q99741 CCDC74B-203ENST00000409128 789 ntAPPRIS ALT2 TSL 2 BASIC21.1■□□□□ 0.97
CDC6Q99741 GUSBP6-202ENST00000438529 1198 ntBASIC21.1■□□□□ 0.97
CDC6Q99741 WWTR1-AS1-203ENST00000495094 975 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
CDC6Q99741 AC133041.1-202ENST00000642053 222 ntBASIC21.1■□□□□ 0.97
CDC6Q99741 ACSS1-203ENST00000432802 2438 ntTSL 2 BASIC21.1■□□□□ 0.97
CDC6Q99741 USP45-205ENST00000472914 1617 ntTSL 5 BASIC21.1■□□□□ 0.97
CDC6Q99741 SH3GL1-201ENST00000269886 2516 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
CDC6Q99741 TTC34-202ENST00000637179 1775 ntAPPRIS P2 TSL 5 BASIC21.1■□□□□ 0.97
CDC6Q99741 MIR222HG-201ENST00000602461 1379 ntTSL 5 BASIC21.1■□□□□ 0.97
CDC6Q99741 GNAS-201ENST00000265620 1866 ntAPPRIS P3 TSL 1 (best) BASIC21.09■□□□□ 0.97
CDC6Q99741 RABL6-202ENST00000357466 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
CDC6Q99741 FMR1-AS1-202ENST00000596112 1845 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
CDC6Q99741 DNAH9-209ENST00000579828 1986 ntTSL 2 BASIC21.09■□□□□ 0.97
CDC6Q99741 LYRM9-201ENST00000379102 501 ntAPPRIS P1 TSL 2 BASIC21.09■□□□□ 0.97
CDC6Q99741 CT47A12-201ENST00000419982 1165 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
CDC6Q99741 ZNF767P-202ENST00000472212 2100 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
CDC6Q99741 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC21.09■□□□□ 0.97
CDC6Q99741 AC005697.1-201ENST00000582441 582 ntAPPRIS P1 TSL 4 BASIC21.09■□□□□ 0.97
CDC6Q99741 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC21.09■□□□□ 0.97
CDC6Q99741 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC21.09■□□□□ 0.97
CDC6Q99741 ZDHHC7-203ENST00000564466 1488 ntTSL 5 BASIC21.08■□□□□ 0.97
CDC6Q99741 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC21.08■□□□□ 0.97
CDC6Q99741 DACT2-203ENST00000607983 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.97
CDC6Q99741 AC069152.1-201ENST00000438030 544 ntBASIC21.08■□□□□ 0.97
CDC6Q99741 NCAPD3-204ENST00000526422 1060 ntAPPRIS ALT2 TSL 2 BASIC21.08■□□□□ 0.97
CDC6Q99741 AL138781.1-201ENST00000566567 1274 ntBASIC21.08■□□□□ 0.97
CDC6Q99741 UBE2DNL-204ENST00000602536 740 ntBASIC21.08■□□□□ 0.97
CDC6Q99741 AEBP2-204ENST00000398864 5099 ntAPPRIS P4 TSL 1 (best) BASIC21.08■□□□□ 0.96
CDC6Q99741 TOR2A-201ENST00000336067 1370 ntTSL 2 BASIC21.08■□□□□ 0.96
CDC6Q99741 AMIGO1-201ENST00000369862 2229 ntAPPRIS P1 TSL 5 BASIC21.08■□□□□ 0.96
CDC6Q99741 CLPTM1L-201ENST00000320895 2500 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
CDC6Q99741 TTBK2-207ENST00000567840 1961 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
CDC6Q99741 SBK2-201ENST00000344158 1056 ntAPPRIS P1 TSL 2 BASIC21.07■□□□□ 0.96
CDC6Q99741 SNRNP25-202ENST00000383018 1085 ntAPPRIS P2 TSL 1 (best) BASIC21.07■□□□□ 0.96
CDC6Q99741 SBK2-202ENST00000413299 1085 ntAPPRIS P1 TSL 5 BASIC21.07■□□□□ 0.96
CDC6Q99741 ARL5A-202ENST00000428992 747 ntTSL 2 BASIC21.07■□□□□ 0.96
CDC6Q99741 AC073210.2-201ENST00000430369 194 ntBASIC21.07■□□□□ 0.96
CDC6Q99741 ULK4P1-204ENST00000565949 721 ntTSL 4 BASIC21.07■□□□□ 0.96
CDC6Q99741 MYCNOS-205ENST00000641950 531 ntBASIC21.07■□□□□ 0.96
CDC6Q99741 PTX3-201ENST00000295927 1940 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
CDC6Q99741 TNIP2-206ENST00000510267 2006 ntAPPRIS ALT2 TSL 2 BASIC21.07■□□□□ 0.96
CDC6Q99741 KLF3-AS1-202ENST00000440181 2368 ntTSL 2 BASIC21.07■□□□□ 0.96
CDC6Q99741 MAP3K3-210ENST00000584573 2480 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
CDC6Q99741 MAGI2-208ENST00000522391 4878 ntAPPRIS ALT2 TSL 5 BASIC21.06■□□□□ 0.96
CDC6Q99741 ANTXR2-202ENST00000346652 1343 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
CDC6Q99741 AC079630.1-202ENST00000618127 1840 ntBASIC21.06■□□□□ 0.96
CDC6Q99741 PRDM13-202ENST00000369215 2429 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
CDC6Q99741 GOLGA7-201ENST00000357743 2027 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
CDC6Q99741 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC21.06■□□□□ 0.96
CDC6Q99741 BHLHA15-201ENST00000314018 706 ntAPPRIS P1 BASIC21.06■□□□□ 0.96
CDC6Q99741 FMR1-202ENST00000334557 1295 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
CDC6Q99741 MCHR1-202ENST00000381433 1219 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
CDC6Q99741 RORB-AS1-201ENST00000417576 1178 ntTSL 5 BASIC21.06■□□□□ 0.96
CDC6Q99741 AF201337.1-201ENST00000520239 748 ntBASIC21.06■□□□□ 0.96
CDC6Q99741 SNHG6-203ENST00000520944 638 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
CDC6Q99741 IL34-204ENST00000566361 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
CDC6Q99741 NMRAL1-212ENST00000574425 1240 ntAPPRIS P1 TSL 2 BASIC21.06■□□□□ 0.96
CDC6Q99741 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC21.06■□□□□ 0.96
CDC6Q99741 BHLHA15-202ENST00000609256 796 ntAPPRIS P1 TSL 3 BASIC21.06■□□□□ 0.96
CDC6Q99741 NAT8L-202ENST00000423729 5870 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
CDC6Q99741 FAM193A-211ENST00000637812 4885 ntAPPRIS ALT2 TSL 5 BASIC21.06■□□□□ 0.96
CDC6Q99741 MAZ-202ENST00000322945 2532 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
CDC6Q99741 AKT1S1-203ENST00000391831 2025 ntAPPRIS P1 TSL 2 BASIC21.05■□□□□ 0.96
CDC6Q99741 TRAPPC5-201ENST00000317378 790 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
CDC6Q99741 AP001160.3-201ENST00000601484 763 ntBASIC21.05■□□□□ 0.96
CDC6Q99741 SRPK3-205ENST00000393786 1900 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 31.7 ms