Protein–RNA interactions for Protein: Q96RY5

CRAMP1, Protein cramped-like, humanhuman

Predictions only

Length 1,269 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CRAMP1Q96RY5 SLC15A3-201ENST00000227880 2115 ntAPPRIS P1 TSL 1 (best) BASIC26.92■■□□□ 1.9
CRAMP1Q96RY5 NPHS2-201ENST00000367615 1855 ntAPPRIS P1 TSL 1 (best) BASIC26.92■■□□□ 1.9
CRAMP1Q96RY5 AMIGO1-201ENST00000369862 2229 ntAPPRIS P1 TSL 5 BASIC26.92■■□□□ 1.9
CRAMP1Q96RY5 DECR2-201ENST00000219481 1615 ntAPPRIS P1 TSL 1 (best) BASIC26.92■■□□□ 1.9
CRAMP1Q96RY5 TSPY6P-201ENST00000448518 926 ntBASIC26.92■■□□□ 1.9
CRAMP1Q96RY5 TFG-210ENST00000620299 1289 ntTSL 5 BASIC26.92■■□□□ 1.9
CRAMP1Q96RY5 TMEM191A-211ENST00000637163 1067 ntBASIC26.92■■□□□ 1.9
CRAMP1Q96RY5 ABHD8-201ENST00000247706 2090 ntAPPRIS P1 TSL 1 (best) BASIC26.92■■□□□ 1.9
CRAMP1Q96RY5 TBX1-202ENST00000332710 2084 ntAPPRIS P4 TSL 1 (best) BASIC26.91■■□□□ 1.9
CRAMP1Q96RY5 HEXDC-202ENST00000337014 2285 ntTSL 1 (best) BASIC26.91■■□□□ 1.9
CRAMP1Q96RY5 DACT2-203ENST00000607983 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC26.91■■□□□ 1.9
CRAMP1Q96RY5 LGALS9B-202ENST00000423676 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC26.91■■□□□ 1.9
CRAMP1Q96RY5 HIST1H2AM-201ENST00000359611 393 ntAPPRIS P1 BASIC26.91■■□□□ 1.9
CRAMP1Q96RY5 DCTPP1-205ENST00000568973 878 ntTSL 2 BASIC26.91■■□□□ 1.9
CRAMP1Q96RY5 LITAF-205ENST00000570904 1118 ntAPPRIS P1 TSL 1 (best) BASIC26.91■■□□□ 1.9
CRAMP1Q96RY5 PSMC3IP-208ENST00000590760 664 ntTSL 1 (best) BASIC26.91■■□□□ 1.9
CRAMP1Q96RY5 ARHGAP27-201ENST00000290470 1376 ntTSL 1 (best) BASIC26.91■■□□□ 1.9
CRAMP1Q96RY5 RAB40B-201ENST00000269347 2189 ntTSL 2 BASIC26.91■■□□□ 1.9
CRAMP1Q96RY5 EFNA2-201ENST00000215368 949 ntAPPRIS P1 TSL 1 (best) BASIC26.9■■□□□ 1.9
CRAMP1Q96RY5 DCTN3-202ENST00000341694 899 ntTSL 1 (best) BASIC26.9■■□□□ 1.9
CRAMP1Q96RY5 DCTN3-205ENST00000378916 773 ntTSL 2 BASIC26.9■■□□□ 1.9
CRAMP1Q96RY5 GUSBP6-202ENST00000438529 1198 ntBASIC26.9■■□□□ 1.9
CRAMP1Q96RY5 AL731577.2-201ENST00000508096 555 ntTSL 2 BASIC26.9■■□□□ 1.9
CRAMP1Q96RY5 CD99P1-205ENST00000527459 561 ntBASIC26.9■■□□□ 1.9
CRAMP1Q96RY5 SLC7A5P2-201ENST00000553010 536 ntBASIC26.9■■□□□ 1.9
CRAMP1Q96RY5 UBE2DNL-204ENST00000602536 740 ntBASIC26.9■■□□□ 1.9
CRAMP1Q96RY5 KCTD5-201ENST00000301738 2482 ntAPPRIS P1 TSL 1 (best) BASIC26.9■■□□□ 1.9
CRAMP1Q96RY5 LSM8-203ENST00000422760 1920 ntTSL 1 (best) BASIC26.89■■□□□ 1.9
CRAMP1Q96RY5 TMPO-201ENST00000261210 820 ntTSL 1 (best) BASIC26.89■■□□□ 1.9
CRAMP1Q96RY5 UBE2C-203ENST00000352551 665 ntTSL 2 BASIC26.89■■□□□ 1.9
CRAMP1Q96RY5 PARP1-202ENST00000366792 553 ntTSL 3 BASIC26.89■■□□□ 1.9
CRAMP1Q96RY5 LYRM9-201ENST00000379102 501 ntAPPRIS P1 TSL 2 BASIC26.89■■□□□ 1.9
CRAMP1Q96RY5 AC007322.1-201ENST00000426983 750 ntBASIC26.89■■□□□ 1.9
CRAMP1Q96RY5 APTR-205ENST00000447009 902 ntTSL 2 BASIC26.89■■□□□ 1.9
CRAMP1Q96RY5 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC26.89■■□□□ 1.9
CRAMP1Q96RY5 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC26.89■■□□□ 1.9
CRAMP1Q96RY5 MVB12A-212ENST00000543795 1154 ntAPPRIS P1 TSL 5 BASIC26.89■■□□□ 1.9
CRAMP1Q96RY5 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC26.89■■□□□ 1.9
CRAMP1Q96RY5 PARP1-210ENST00000629232 477 ntTSL 5 BASIC26.89■■□□□ 1.9
CRAMP1Q96RY5 IL17RE-203ENST00000421412 2158 ntAPPRIS ALT2 TSL 1 (best) BASIC26.89■■□□□ 1.9
CRAMP1Q96RY5 TBL2-222ENST00000610724 2165 ntTSL 5 BASIC26.88■■□□□ 1.89
CRAMP1Q96RY5 TOR2A-201ENST00000336067 1370 ntTSL 2 BASIC26.88■■□□□ 1.89
CRAMP1Q96RY5 ELOA3B-201ENST00000611323 1641 ntAPPRIS P1 BASIC26.88■■□□□ 1.89
CRAMP1Q96RY5 ELOA3D-201ENST00000620881 1641 ntAPPRIS P1 BASIC26.88■■□□□ 1.89
CRAMP1Q96RY5 EN1-201ENST00000295206 2457 ntAPPRIS P1 TSL 2 BASIC26.88■■□□□ 1.89
CRAMP1Q96RY5 VDAC1-203ENST00000395047 1873 ntAPPRIS P1 TSL 1 (best) BASIC26.88■■□□□ 1.89
CRAMP1Q96RY5 METTL15-202ENST00000403099 795 ntTSL 5 BASIC26.88■■□□□ 1.89
CRAMP1Q96RY5 CMTM8-202ENST00000458535 996 ntTSL 1 (best) BASIC26.88■■□□□ 1.89
CRAMP1Q96RY5 TRAPPC5-203ENST00000595985 411 ntTSL 3 BASIC26.88■■□□□ 1.89
CRAMP1Q96RY5 AC005181.1-201ENST00000604782 1256 ntBASIC26.88■■□□□ 1.89
CRAMP1Q96RY5 NAE1-202ENST00000359087 1825 ntTSL 2 BASIC26.88■■□□□ 1.89
CRAMP1Q96RY5 ARL6IP4-204ENST00000392435 1339 ntAPPRIS ALT2 TSL 1 (best) BASIC26.88■■□□□ 1.89
CRAMP1Q96RY5 LACTBL1-201ENST00000426928 1641 ntAPPRIS P5 TSL 5 BASIC26.87■■□□□ 1.89
CRAMP1Q96RY5 PLEKHB1-201ENST00000227214 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC26.87■■□□□ 1.89
CRAMP1Q96RY5 SNTA1-201ENST00000217381 2342 ntAPPRIS P1 TSL 1 (best) BASIC26.87■■□□□ 1.89
CRAMP1Q96RY5 UXS1-201ENST00000283148 2099 ntAPPRIS ALT1 TSL 2 BASIC26.87■■□□□ 1.89
CRAMP1Q96RY5 LINC01117-201ENST00000443670 699 ntTSL 5 BASIC26.87■■□□□ 1.89
CRAMP1Q96RY5 HMX1-202ENST00000506970 651 ntTSL 1 (best) BASIC26.87■■□□□ 1.89
CRAMP1Q96RY5 CDH18-AS1-201ENST00000513573 424 ntTSL 2 BASIC26.87■■□□□ 1.89
CRAMP1Q96RY5 OAS3-207ENST00000551007 998 ntTSL 2 BASIC26.87■■□□□ 1.89
CRAMP1Q96RY5 HERC2P5-204ENST00000569697 1214 ntTSL 2 BASIC26.87■■□□□ 1.89
CRAMP1Q96RY5 AC016888.1-201ENST00000585285 565 ntTSL 3 BASIC26.87■■□□□ 1.89
CRAMP1Q96RY5 EPHA8-202ENST00000374644 1802 ntTSL 1 (best) BASIC26.87■■□□□ 1.89
CRAMP1Q96RY5 TSPAN4-206ENST00000397408 1430 ntAPPRIS P1 TSL 2 BASIC26.87■■□□□ 1.89
CRAMP1Q96RY5 ZNF219-201ENST00000360947 3071 ntAPPRIS P1 TSL 1 (best) BASIC26.87■■□□□ 1.89
CRAMP1Q96RY5 RAB1A-202ENST00000409751 1333 ntTSL 5 BASIC26.87■■□□□ 1.89
CRAMP1Q96RY5 LYRM1-201ENST00000219168 1626 ntAPPRIS P1 TSL 2 BASIC26.87■■□□□ 1.89
CRAMP1Q96RY5 SLC25A29-201ENST00000359232 2385 ntAPPRIS P1 TSL 1 (best) BASIC26.86■■□□□ 1.89
CRAMP1Q96RY5 ZPBP2-201ENST00000348931 1543 ntAPPRIS P4 TSL 1 (best) BASIC26.86■■□□□ 1.89
CRAMP1Q96RY5 FITM1-201ENST00000267426 1194 ntAPPRIS P1 TSL 1 (best) BASIC26.86■■□□□ 1.89
CRAMP1Q96RY5 TTC39A-203ENST00000371747 1876 ntTSL 2 BASIC26.86■■□□□ 1.89
CRAMP1Q96RY5 ZSWIM7-205ENST00000472495 703 ntAPPRIS P1 TSL 1 (best) BASIC26.86■■□□□ 1.89
CRAMP1Q96RY5 EDA-210ENST00000527388 927 ntTSL 1 (best) BASIC26.86■■□□□ 1.89
CRAMP1Q96RY5 ABCC6P2-202ENST00000542005 706 ntTSL 1 (best) BASIC26.86■■□□□ 1.89
CRAMP1Q96RY5 CAMTA1-216ENST00000557126 486 ntTSL 2 BASIC26.86■■□□□ 1.89
CRAMP1Q96RY5 AC074212.1-201ENST00000559756 1402 ntTSL 3 BASIC26.86■■□□□ 1.89
CRAMP1Q96RY5 ABCC6-204ENST00000575728 714 ntTSL 1 (best) BASIC26.86■■□□□ 1.89
CRAMP1Q96RY5 AP001160.3-201ENST00000601484 763 ntBASIC26.86■■□□□ 1.89
CRAMP1Q96RY5 AC090377.1-201ENST00000585691 1762 ntTSL 3 BASIC26.86■■□□□ 1.89
CRAMP1Q96RY5 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC26.86■■□□□ 1.89
CRAMP1Q96RY5 MFF-207ENST00000409565 1548 ntTSL 2 BASIC26.85■■□□□ 1.89
CRAMP1Q96RY5 PKDCC-201ENST00000294964 2502 ntAPPRIS P1 TSL 1 (best) BASIC26.85■■□□□ 1.89
CRAMP1Q96RY5 PXK-203ENST00000383715 1756 ntTSL 5 BASIC26.85■■□□□ 1.89
CRAMP1Q96RY5 GGTLC1-202ENST00000286890 1028 ntAPPRIS P1 TSL 1 (best) BASIC26.85■■□□□ 1.89
CRAMP1Q96RY5 HRASLS5-201ENST00000301790 1166 ntAPPRIS P3 TSL 1 (best) BASIC26.85■■□□□ 1.89
CRAMP1Q96RY5 NDUFS3-207ENST00000529276 558 ntTSL 2 BASIC26.85■■□□□ 1.89
CRAMP1Q96RY5 AC005789.1-201ENST00000585411 297 ntTSL 3 BASIC26.85■■□□□ 1.89
CRAMP1Q96RY5 AC018730.2-201ENST00000598623 443 ntTSL 5 BASIC26.85■■□□□ 1.89
CRAMP1Q96RY5 MYCNOS-205ENST00000641950 531 ntBASIC26.85■■□□□ 1.89
CRAMP1Q96RY5 KCTD15-207ENST00000589786 1625 ntAPPRIS P1 TSL 2 BASIC26.85■■□□□ 1.89
CRAMP1Q96RY5 PCOLCE2-201ENST00000295992 2021 ntAPPRIS P1 TSL 1 (best) BASIC26.85■■□□□ 1.89
CRAMP1Q96RY5 RAB3A-201ENST00000222256 1528 ntAPPRIS P1 TSL 1 (best) BASIC26.85■■□□□ 1.89
CRAMP1Q96RY5 AC055733.4-201ENST00000638462 1354 ntBASIC26.84■■□□□ 1.89
CRAMP1Q96RY5 PLBD2-202ENST00000545182 2321 ntTSL 2 BASIC26.84■■□□□ 1.89
CRAMP1Q96RY5 ADIPOR1-201ENST00000340990 2177 ntAPPRIS P1 TSL 1 (best) BASIC26.84■■□□□ 1.89
CRAMP1Q96RY5 ABCB10P4-201ENST00000566803 2184 ntBASIC26.84■■□□□ 1.89
CRAMP1Q96RY5 MT3-201ENST00000200691 569 ntAPPRIS P1 TSL 1 (best) BASIC26.84■■□□□ 1.89
CRAMP1Q96RY5 AC007216.1-201ENST00000570197 601 ntTSL 4 BASIC26.84■■□□□ 1.89
CRAMP1Q96RY5 ARFRP1-202ENST00000607873 1061 ntTSL 2 BASIC26.84■■□□□ 1.89
CRAMP1Q96RY5 MORF4L1-202ENST00000379535 2274 ntTSL 2 BASIC26.84■■□□□ 1.89
Retrieved 100 of 98,524 protein–RNA pairs in 22.6 ms