Protein–RNA interactions for Protein: Q96QU1

PCDH15, Protocadherin-15, humanhuman

Predictions only

Length 1,955 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH15Q96QU1 OAS3-207ENST00000551007 998 ntTSL 2 BASIC21.46■■□□□ 1.03
PCDH15Q96QU1 MDK-213ENST00000617138 635 ntTSL 2 BASIC21.46■■□□□ 1.03
PCDH15Q96QU1 AC231657.2-201ENST00000624556 255 ntBASIC21.46■■□□□ 1.03
PCDH15Q96QU1 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC21.46■■□□□ 1.03
PCDH15Q96QU1 C7orf25-203ENST00000431882 1645 ntTSL 2 BASIC21.46■■□□□ 1.03
PCDH15Q96QU1 ZFAND6-224ENST00000618205 1659 ntAPPRIS P1 TSL 5 BASIC21.45■■□□□ 1.03
PCDH15Q96QU1 UCK2-201ENST00000367879 1375 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.03
PCDH15Q96QU1 PRMT5-213ENST00000553897 1857 ntTSL 2 BASIC21.45■■□□□ 1.02
PCDH15Q96QU1 TSPY6P-201ENST00000448518 926 ntBASIC21.45■■□□□ 1.02
PCDH15Q96QU1 SLC35B2-201ENST00000393810 1898 ntTSL 2 BASIC21.45■■□□□ 1.02
PCDH15Q96QU1 SRXN1-201ENST00000381962 2698 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
PCDH15Q96QU1 PGPEP1L-201ENST00000378919 995 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
PCDH15Q96QU1 IL15RA-208ENST00000397251 1046 ntAPPRIS ALT2 TSL 1 (best) BASIC21.45■■□□□ 1.02
PCDH15Q96QU1 PARD6A-203ENST00000602551 1171 ntTSL 5 BASIC21.45■■□□□ 1.02
PCDH15Q96QU1 TFG-210ENST00000620299 1289 ntTSL 5 BASIC21.45■■□□□ 1.02
PCDH15Q96QU1 IL15RA-221ENST00000620865 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC21.45■■□□□ 1.02
PCDH15Q96QU1 IL15RA-222ENST00000622442 1160 ntAPPRIS ALT2 TSL 1 (best) BASIC21.45■■□□□ 1.02
PCDH15Q96QU1 FAM160B1-201ENST00000369246 666 ntTSL 2 BASIC21.44■■□□□ 1.02
PCDH15Q96QU1 PACRGL-206ENST00000502374 1034 ntTSL 2 BASIC21.44■■□□□ 1.02
PCDH15Q96QU1 AC098934.4-201ENST00000564127 592 ntBASIC21.44■■□□□ 1.02
PCDH15Q96QU1 LOXL1-AS1-208ENST00000565756 885 ntTSL 2 BASIC21.44■■□□□ 1.02
PCDH15Q96QU1 AC016888.1-201ENST00000585285 565 ntTSL 3 BASIC21.44■■□□□ 1.02
PCDH15Q96QU1 AL138781.1-201ENST00000566567 1274 ntBASIC21.43■■□□□ 1.02
PCDH15Q96QU1 AL139125.2-201ENST00000623134 1869 ntBASIC21.43■■□□□ 1.02
PCDH15Q96QU1 PON2-217ENST00000633192 1876 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
PCDH15Q96QU1 ARHGAP27-201ENST00000290470 1376 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
PCDH15Q96QU1 NFKBIE-201ENST00000275015 2581 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
PCDH15Q96QU1 NAGS-201ENST00000293404 2182 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
PCDH15Q96QU1 CNN2P6-201ENST00000439038 900 ntBASIC21.43■■□□□ 1.02
PCDH15Q96QU1 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC21.43■■□□□ 1.02
PCDH15Q96QU1 PNLIPRP2-204ENST00000591655 1456 ntAPPRIS ALT1 TSL 5 BASIC21.42■■□□□ 1.02
PCDH15Q96QU1 ZFYVE28-202ENST00000503000 1874 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
PCDH15Q96QU1 ASCC1-204ENST00000394915 1510 ntTSL 5 BASIC21.42■■□□□ 1.02
PCDH15Q96QU1 ZFP91-CNTF-201ENST00000389919 2319 ntAPPRIS P5 TSL 2 BASIC21.42■■□□□ 1.02
PCDH15Q96QU1 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC21.42■■□□□ 1.02
PCDH15Q96QU1 MBOAT7-201ENST00000245615 2529 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
PCDH15Q96QU1 C19orf81-201ENST00000425202 765 ntAPPRIS P2 TSL 5 BASIC21.42■■□□□ 1.02
PCDH15Q96QU1 AC069152.1-201ENST00000438030 544 ntBASIC21.42■■□□□ 1.02
PCDH15Q96QU1 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC21.42■■□□□ 1.02
PCDH15Q96QU1 UCHL5-204ENST00000367451 1346 ntTSL 5 BASIC21.42■■□□□ 1.02
PCDH15Q96QU1 PMS1-205ENST00000409985 1882 ntTSL 2 BASIC21.42■■□□□ 1.02
PCDH15Q96QU1 HACD3-205ENST00000562901 1797 ntTSL 5 BASIC21.41■■□□□ 1.02
PCDH15Q96QU1 KLF13-207ENST00000560473 489 ntTSL 3 BASIC21.41■■□□□ 1.02
PCDH15Q96QU1 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC21.41■■□□□ 1.02
PCDH15Q96QU1 UTS2R-201ENST00000313135 1357 ntAPPRIS P1 BASIC21.41■■□□□ 1.02
PCDH15Q96QU1 CSNK1E-203ENST00000396832 2791 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
PCDH15Q96QU1 TNFRSF18-201ENST00000328596 851 ntAPPRIS P4 TSL 1 (best) BASIC21.41■■□□□ 1.02
PCDH15Q96QU1 KHDC3L-201ENST00000370367 1018 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
PCDH15Q96QU1 CHTF8-210ENST00000523421 766 ntTSL 3 BASIC21.41■■□□□ 1.02
PCDH15Q96QU1 AL355102.2-201ENST00000553811 600 ntAPPRIS P1 TSL 2 BASIC21.41■■□□□ 1.02
PCDH15Q96QU1 MYCNOS-205ENST00000641950 531 ntBASIC21.41■■□□□ 1.02
PCDH15Q96QU1 EPO-201ENST00000252723 1330 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
PCDH15Q96QU1 FOSL1-201ENST00000312562 1669 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
PCDH15Q96QU1 OSCAR-209ENST00000616215 2016 ntAPPRIS ALT2 TSL 5 BASIC21.4■■□□□ 1.02
PCDH15Q96QU1 NPAS1-208ENST00000602212 2117 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
PCDH15Q96QU1 SERBP1-202ENST00000370990 1621 ntAPPRIS ALT2 TSL 1 (best) BASIC21.4■■□□□ 1.02
PCDH15Q96QU1 POU2F3-206ENST00000543440 1953 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
PCDH15Q96QU1 ARFRP1-202ENST00000607873 1061 ntTSL 2 BASIC21.4■■□□□ 1.02
PCDH15Q96QU1 SLC35A3-218ENST00000639994 1114 ntTSL 5 BASIC21.4■■□□□ 1.02
PCDH15Q96QU1 ADIPOR1-201ENST00000340990 2177 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
PCDH15Q96QU1 MAP2K5-204ENST00000395476 1689 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
PCDH15Q96QU1 CREB3L3-202ENST00000595923 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC21.4■■□□□ 1.02
PCDH15Q96QU1 NFS1-201ENST00000306750 738 ntTSL 1 (best) BASIC21.39■■□□□ 1.02
PCDH15Q96QU1 LYRM9-201ENST00000379102 501 ntAPPRIS P1 TSL 2 BASIC21.39■■□□□ 1.02
PCDH15Q96QU1 AP000282.1-201ENST00000454622 682 ntTSL 2 BASIC21.39■■□□□ 1.02
PCDH15Q96QU1 ZSWIM7-205ENST00000472495 703 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
PCDH15Q96QU1 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC21.39■■□□□ 1.02
PCDH15Q96QU1 LRRC34-206ENST00000522526 1899 ntAPPRIS P3 TSL 1 (best) BASIC21.39■■□□□ 1.02
PCDH15Q96QU1 BX088645.1-201ENST00000636699 1728 ntAPPRIS P1 TSL 5 BASIC21.39■■□□□ 1.01
PCDH15Q96QU1 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
PCDH15Q96QU1 AL591684.2-201ENST00000605970 1594 ntTSL 5 BASIC21.39■■□□□ 1.01
PCDH15Q96QU1 PARP1-202ENST00000366792 553 ntTSL 3 BASIC21.39■■□□□ 1.01
PCDH15Q96QU1 PAQR4-205ENST00000576565 842 ntTSL 2 BASIC21.39■■□□□ 1.01
PCDH15Q96QU1 FMR1-AS1-202ENST00000596112 1845 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
PCDH15Q96QU1 ASL-203ENST00000380839 1765 ntTSL 5 BASIC21.39■■□□□ 1.01
PCDH15Q96QU1 IQCJ-SCHIP1-202ENST00000460298 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC21.38■■□□□ 1.01
PCDH15Q96QU1 RPIA-201ENST00000283646 1848 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
PCDH15Q96QU1 SPDYE2-201ENST00000341656 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC21.38■■□□□ 1.01
PCDH15Q96QU1 SPDYE2B-202ENST00000455020 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC21.38■■□□□ 1.01
PCDH15Q96QU1 CMTM8-202ENST00000458535 996 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
PCDH15Q96QU1 AC083906.2-201ENST00000511578 360 ntBASIC21.38■■□□□ 1.01
PCDH15Q96QU1 AC005789.1-201ENST00000585411 297 ntTSL 3 BASIC21.38■■□□□ 1.01
PCDH15Q96QU1 CYP2A13-201ENST00000330436 1739 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
PCDH15Q96QU1 WDR86-201ENST00000334493 2023 ntAPPRIS P1 TSL 5 BASIC21.38■■□□□ 1.01
PCDH15Q96QU1 ABHD14A-204ENST00000491470 674 ntTSL 3 BASIC21.37■■□□□ 1.01
PCDH15Q96QU1 TMEM263-203ENST00000547242 811 ntAPPRIS P1 TSL 2 BASIC21.37■■□□□ 1.01
PCDH15Q96QU1 AL845552.2-201ENST00000553301 553 ntTSL 4 BASIC21.37■■□□□ 1.01
PCDH15Q96QU1 PARP1-210ENST00000629232 477 ntTSL 5 BASIC21.37■■□□□ 1.01
PCDH15Q96QU1 SLC22A31-206ENST00000614943 1860 ntTSL 5 BASIC21.37■■□□□ 1.01
PCDH15Q96QU1 SDR39U1-208ENST00000554698 1364 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
PCDH15Q96QU1 CPLX1-201ENST00000304062 2181 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
PCDH15Q96QU1 EGR4-201ENST00000436467 2377 ntAPPRIS ALT2 TSL 1 (best) BASIC21.37■■□□□ 1.01
PCDH15Q96QU1 SLC29A4P1-201ENST00000398760 971 ntBASIC21.37■■□□□ 1.01
PCDH15Q96QU1 EDA-210ENST00000527388 927 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
PCDH15Q96QU1 AC106820.5-201ENST00000566085 789 ntTSL 3 BASIC21.37■■□□□ 1.01
PCDH15Q96QU1 AL512625.3-202ENST00000591993 1091 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
PCDH15Q96QU1 AC005181.1-201ENST00000604782 1256 ntBASIC21.37■■□□□ 1.01
PCDH15Q96QU1 MIR222HG-201ENST00000602461 1379 ntTSL 5 BASIC21.36■■□□□ 1.01
PCDH15Q96QU1 ZNRF1-201ENST00000320619 2479 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
PCDH15Q96QU1 SPON2-222ENST00000617421 2156 ntAPPRIS P1 TSL 5 BASIC21.36■■□□□ 1.01
Retrieved 100 of 98,524 protein–RNA pairs in 20.2 ms