Protein–RNA interactions for Protein: Q96BI3

APH1A, Gamma-secretase subunit APH-1A, humanhuman

Predictions only

Length 265 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APH1AQ96BI3 AC005775.1-201ENST00000592413 850 ntTSL 5 BASIC19.25■□□□□ 0.67
APH1AQ96BI3 STOML2-205ENST00000619795 1293 ntTSL 3 BASIC19.25■□□□□ 0.67
APH1AQ96BI3 SLAIN1-213ENST00000466548 2637 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
APH1AQ96BI3 CKMT1B-207ENST00000441322 1747 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
APH1AQ96BI3 SCN1B-206ENST00000638536 1600 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
APH1AQ96BI3 LYPLA1-201ENST00000316963 2585 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
APH1AQ96BI3 STOML1-201ENST00000316900 2169 ntTSL 2 BASIC19.25■□□□□ 0.67
APH1AQ96BI3 ANKRD53-204ENST00000457410 1671 ntTSL 5 BASIC19.24■□□□□ 0.67
APH1AQ96BI3 ZNF419-203ENST00000354197 1569 ntTSL 5 BASIC19.24■□□□□ 0.67
APH1AQ96BI3 PHF10-202ENST00000366780 1589 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
APH1AQ96BI3 DLK2-201ENST00000357338 2038 ntAPPRIS P3 TSL 2 BASIC19.24■□□□□ 0.67
APH1AQ96BI3 BIN1-205ENST00000351659 2365 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
APH1AQ96BI3 PPM1N-207ENST00000451287 1293 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
APH1AQ96BI3 MED14OS-201ENST00000456333 900 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
APH1AQ96BI3 AES-207ENST00000586839 942 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
APH1AQ96BI3 AL354811.1-201ENST00000610286 706 ntBASIC19.24■□□□□ 0.67
APH1AQ96BI3 CLN3-207ENST00000395653 1430 ntTSL 5 BASIC19.24■□□□□ 0.67
APH1AQ96BI3 AL137002.2-201ENST00000639766 2238 ntTSL 5 BASIC19.24■□□□□ 0.67
APH1AQ96BI3 NHLH1-201ENST00000302101 2563 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
APH1AQ96BI3 ZNF395-210ENST00000523095 1790 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
APH1AQ96BI3 C1orf229-201ENST00000623686 2258 ntBASIC19.23■□□□□ 0.67
APH1AQ96BI3 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
APH1AQ96BI3 MAIP1-201ENST00000295079 1495 ntAPPRIS P2 TSL 2 BASIC19.23■□□□□ 0.67
APH1AQ96BI3 PLEKHO1-201ENST00000369124 2050 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
APH1AQ96BI3 AC087742.1-201ENST00000575880 1738 ntBASIC19.23■□□□□ 0.67
APH1AQ96BI3 SSUH2-217ENST00000544814 1636 ntAPPRIS ALT2 TSL 2 BASIC19.23■□□□□ 0.67
APH1AQ96BI3 TOX2-201ENST00000341197 1880 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
APH1AQ96BI3 AK1-201ENST00000223836 736 ntTSL 3 BASIC19.23■□□□□ 0.67
APH1AQ96BI3 RPL8-201ENST00000262584 1041 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
APH1AQ96BI3 TUSC3-209ENST00000509380 1266 ntTSL 5 BASIC19.23■□□□□ 0.67
APH1AQ96BI3 AC012414.1-201ENST00000556676 535 ntBASIC19.23■□□□□ 0.67
APH1AQ96BI3 ZNF668-205ENST00000426488 2282 ntTSL 5 BASIC19.23■□□□□ 0.67
APH1AQ96BI3 THRA-201ENST00000264637 2538 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
APH1AQ96BI3 AKT1-201ENST00000349310 2866 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
APH1AQ96BI3 SAXO1-201ENST00000380530 1727 ntAPPRIS ALT2 TSL 2 BASIC19.22■□□□□ 0.67
APH1AQ96BI3 GOLGA6L9-202ENST00000618348 1710 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
APH1AQ96BI3 ALKAL2-204ENST00000403610 1389 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
APH1AQ96BI3 ZFAND2B-202ENST00000409097 1765 ntTSL 2 BASIC19.22■□□□□ 0.67
APH1AQ96BI3 ESRRAP2-201ENST00000418437 1549 ntBASIC19.22■□□□□ 0.67
APH1AQ96BI3 C3orf80-201ENST00000326474 2718 ntAPPRIS P1 BASIC19.22■□□□□ 0.67
APH1AQ96BI3 CYC1-201ENST00000318911 1240 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
APH1AQ96BI3 MFF-208ENST00000409616 1247 ntTSL 5 BASIC19.22■□□□□ 0.67
APH1AQ96BI3 LINC01167-201ENST00000423232 604 ntTSL 3 BASIC19.22■□□□□ 0.67
APH1AQ96BI3 POLR2H-204ENST00000438240 994 ntTSL 3 BASIC19.22■□□□□ 0.67
APH1AQ96BI3 ZFAS1-206ENST00000450535 1075 ntTSL 3 BASIC19.22■□□□□ 0.67
APH1AQ96BI3 AL355877.1-204ENST00000451482 1078 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
APH1AQ96BI3 ACBD4-216ENST00000619916 1276 ntTSL 5 BASIC19.22■□□□□ 0.67
APH1AQ96BI3 PRR35-201ENST00000409413 2216 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
APH1AQ96BI3 RALB-201ENST00000272519 2344 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
APH1AQ96BI3 HOXD1-201ENST00000331462 1975 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
APH1AQ96BI3 LHX2-201ENST00000373615 2554 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
APH1AQ96BI3 FBXW7-202ENST00000281708 4976 ntAPPRIS P4 TSL 1 (best) BASIC19.21■□□□□ 0.67
APH1AQ96BI3 PRKCZ-AS1-201ENST00000333854 1253 ntTSL 2 BASIC19.21■□□□□ 0.67
APH1AQ96BI3 NKX2-1-201ENST00000354822 2191 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
APH1AQ96BI3 CCDC160-201ENST00000370809 1299 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
APH1AQ96BI3 AC079089.2-201ENST00000531211 1277 ntBASIC19.21■□□□□ 0.67
APH1AQ96BI3 COG8-201ENST00000562081 1731 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
APH1AQ96BI3 HERC2P4-206ENST00000568097 1062 ntTSL 5 BASIC19.21■□□□□ 0.67
APH1AQ96BI3 ADAP2-204ENST00000580525 1598 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
APH1AQ96BI3 GSX2-205ENST00000611459 1262 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
APH1AQ96BI3 NPEPL1-201ENST00000356091 2378 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
APH1AQ96BI3 DLL3-202ENST00000356433 2055 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
APH1AQ96BI3 AP006623.1-201ENST00000506172 2061 ntTSL 5 BASIC19.21■□□□□ 0.67
APH1AQ96BI3 AP1S1-201ENST00000337619 1306 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
APH1AQ96BI3 MPST-204ENST00000404393 1329 ntTSL 5 BASIC19.21■□□□□ 0.67
APH1AQ96BI3 ARHGAP27-207ENST00000528273 2319 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
APH1AQ96BI3 DMRT2-209ENST00000635183 2190 ntTSL 5 BASIC19.2■□□□□ 0.66
APH1AQ96BI3 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
APH1AQ96BI3 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC19.2■□□□□ 0.66
APH1AQ96BI3 SLC25A47-202ENST00000557052 1552 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
APH1AQ96BI3 ANKRD11-217ENST00000613312 1584 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
APH1AQ96BI3 RNF19B-203ENST00000373456 2560 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
APH1AQ96BI3 PHLDB3-207ENST00000599242 2286 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
APH1AQ96BI3 JTB-203ENST00000368589 1216 ntTSL 2 BASIC19.2■□□□□ 0.66
APH1AQ96BI3 EIF6-201ENST00000374436 1252 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
APH1AQ96BI3 MIR935-201ENST00000401179 91 ntBASIC19.2■□□□□ 0.66
APH1AQ96BI3 AC011446.1-201ENST00000591825 458 ntTSL 2 BASIC19.2■□□□□ 0.66
APH1AQ96BI3 CTAG1A-201ENST00000593606 993 ntTSL 5 BASIC19.2■□□□□ 0.66
APH1AQ96BI3 ATP5G2-208ENST00000552242 1950 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
APH1AQ96BI3 SEC22C-207ENST00000423701 1458 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
APH1AQ96BI3 CUEDC1-202ENST00000407144 2190 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
APH1AQ96BI3 CRHR1-202ENST00000314537 2535 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
APH1AQ96BI3 GSR-204ENST00000537535 1323 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
APH1AQ96BI3 UQCR11-203ENST00000591899 1324 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
APH1AQ96BI3 DBP-201ENST00000222122 2229 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
APH1AQ96BI3 LTK-203ENST00000453182 2412 ntTSL 2 BASIC19.2■□□□□ 0.66
APH1AQ96BI3 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
APH1AQ96BI3 NRG2-201ENST00000289409 2535 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
APH1AQ96BI3 ZFP69B-204ENST00000484445 1976 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
APH1AQ96BI3 ABHD6-201ENST00000295962 2393 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
APH1AQ96BI3 AVPR2-201ENST00000337474 1622 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
APH1AQ96BI3 THRA-209ENST00000584985 2421 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
APH1AQ96BI3 FAM219A-202ENST00000379078 770 ntTSL 3 BASIC19.19■□□□□ 0.66
APH1AQ96BI3 PRKCQ-AS1-204ENST00000455810 920 ntTSL 2 BASIC19.19■□□□□ 0.66
APH1AQ96BI3 TMCC2-209ENST00000637895 1455 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
APH1AQ96BI3 SH3D19-211ENST00000604030 5228 ntTSL 5 BASIC19.19■□□□□ 0.66
APH1AQ96BI3 AARD-201ENST00000378279 2299 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
APH1AQ96BI3 CADM1-201ENST00000331581 1766 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
APH1AQ96BI3 CDKN1C-202ENST00000414822 2051 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
APH1AQ96BI3 CAPG-201ENST00000263867 1442 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 14.1 ms