Protein–RNA interactions for Protein: Q969V3

NCLN, Nicalin, humanhuman

Predictions only

Length 563 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCLNQ969V3 DPP10-AS1-201ENST00000432658 730 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
NCLNQ969V3 LRMDA-215ENST00000611255 1040 ntAPPRIS ALT2 TSL 5 BASIC20.97■□□□□ 0.95
NCLNQ969V3 RNF39-202ENST00000376751 1970 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
NCLNQ969V3 SLC18A3-201ENST00000374115 2420 ntAPPRIS P1 BASIC20.97■□□□□ 0.95
NCLNQ969V3 TMEM159-201ENST00000233047 2014 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
NCLNQ969V3 ILDR2-205ENST00000526687 2299 ntTSL 5 BASIC20.97■□□□□ 0.95
NCLNQ969V3 NR5A1-204ENST00000620110 2975 ntTSL 5 BASIC20.97■□□□□ 0.95
NCLNQ969V3 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC20.96■□□□□ 0.95
NCLNQ969V3 C14orf80-201ENST00000329886 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
NCLNQ969V3 TMEM165-201ENST00000381334 1928 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
NCLNQ969V3 AL353803.4-201ENST00000565882 1934 ntBASIC20.96■□□□□ 0.95
NCLNQ969V3 SUMF1-201ENST00000272902 2159 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
NCLNQ969V3 EEF1D-201ENST00000317198 1458 ntAPPRIS ALT2 TSL 5 BASIC20.96■□□□□ 0.95
NCLNQ969V3 PTPN13-205ENST00000502971 1708 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
NCLNQ969V3 TERF2-201ENST00000254942 2983 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
NCLNQ969V3 NALT1-201ENST00000429224 738 ntTSL 5 BASIC20.96■□□□□ 0.95
NCLNQ969V3 AC096631.2-201ENST00000436136 790 ntBASIC20.96■□□□□ 0.95
NCLNQ969V3 RPRD1A-207ENST00000588737 1264 ntTSL 2 BASIC20.96■□□□□ 0.95
NCLNQ969V3 LINC01632-201ENST00000615763 496 ntTSL 3 BASIC20.96■□□□□ 0.95
NCLNQ969V3 AC007375.3-201ENST00000600936 2314 ntBASIC20.96■□□□□ 0.95
NCLNQ969V3 PRELID2-201ENST00000334744 2140 ntTSL 2 BASIC20.96■□□□□ 0.95
NCLNQ969V3 CCDC7-201ENST00000277657 1899 ntAPPRIS P2 TSL 1 (best) BASIC20.96■□□□□ 0.95
NCLNQ969V3 FDFT1-201ENST00000220584 2176 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
NCLNQ969V3 SPAG16-202ENST00000331683 2177 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
NCLNQ969V3 FAM83D-201ENST00000619304 2475 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
NCLNQ969V3 GAS2L1-206ENST00000610653 2238 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
NCLNQ969V3 HNRNPD-202ENST00000352301 1667 ntAPPRIS ALT1 TSL 1 (best) BASIC20.96■□□□□ 0.95
NCLNQ969V3 RHOT1-205ENST00000545287 2516 ntAPPRIS P4 TSL 5 BASIC20.96■□□□□ 0.95
NCLNQ969V3 HES4-201ENST00000304952 899 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
NCLNQ969V3 PRICKLE4-201ENST00000394259 939 ntAPPRIS ALT2 TSL 5 BASIC20.95■□□□□ 0.94
NCLNQ969V3 CHTF8-208ENST00000522091 863 ntTSL 2 BASIC20.95■□□□□ 0.94
NCLNQ969V3 ZNF584-205ENST00000596281 575 ntTSL 2 BASIC20.95■□□□□ 0.94
NCLNQ969V3 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
NCLNQ969V3 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC20.95■□□□□ 0.94
NCLNQ969V3 BRWD1-202ENST00000341322 2495 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
NCLNQ969V3 ABCG4-204ENST00000615496 2459 ntAPPRIS P1 TSL 2 BASIC20.95■□□□□ 0.94
NCLNQ969V3 SORCS2-203ENST00000507866 6152 ntAPPRIS P2 TSL 1 (best) BASIC20.95■□□□□ 0.94
NCLNQ969V3 ASPSCR1-202ENST00000306739 1843 ntAPPRIS P3 TSL 1 (best) BASIC20.94■□□□□ 0.94
NCLNQ969V3 RAP1B-207ENST00000450214 1466 ntTSL 2 BASIC20.94■□□□□ 0.94
NCLNQ969V3 EFCAB1-202ENST00000433756 2286 ntTSL 2 BASIC20.94■□□□□ 0.94
NCLNQ969V3 PSKH1-202ENST00000570631 1509 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
NCLNQ969V3 NR0B1-202ENST00000378970 2021 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
NCLNQ969V3 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
NCLNQ969V3 HNRNPAB-201ENST00000355836 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
NCLNQ969V3 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC20.94■□□□□ 0.94
NCLNQ969V3 PNMA2-204ENST00000522362 4965 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
NCLNQ969V3 MATK-203ENST00000395045 2073 ntAPPRIS P4 TSL 2 BASIC20.94■□□□□ 0.94
NCLNQ969V3 NHLRC4-202ENST00000540585 2071 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
NCLNQ969V3 CSNK1G2-201ENST00000255641 2918 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
NCLNQ969V3 DNPH1-201ENST00000230431 657 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
NCLNQ969V3 PCGF3-202ENST00000400151 1175 ntTSL 2 BASIC20.94■□□□□ 0.94
NCLNQ969V3 ARHGDIA-217ENST00000584461 886 ntTSL 2 BASIC20.94■□□□□ 0.94
NCLNQ969V3 AC099791.2-201ENST00000605725 427 ntBASIC20.94■□□□□ 0.94
NCLNQ969V3 KRTAP5-4-202ENST00000616115 660 ntAPPRIS ALT2 TSL 5 BASIC20.94■□□□□ 0.94
NCLNQ969V3 UBE2H-201ENST00000355621 5151 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
NCLNQ969V3 BX088645.1-201ENST00000636699 1728 ntAPPRIS P1 TSL 5 BASIC20.94■□□□□ 0.94
NCLNQ969V3 RASGRP2-210ENST00000394430 2174 ntTSL 2 BASIC20.94■□□□□ 0.94
NCLNQ969V3 TRIM67-203ENST00000449018 2166 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
NCLNQ969V3 CDC20-202ENST00000372462 1777 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
NCLNQ969V3 TMEM259-202ENST00000356663 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
NCLNQ969V3 SLC35F4-206ENST00000556826 1908 ntAPPRIS P1 TSL 5 BASIC20.94■□□□□ 0.94
NCLNQ969V3 SRPK3-202ENST00000370101 1958 ntAPPRIS P3 TSL 1 (best) BASIC20.94■□□□□ 0.94
NCLNQ969V3 ADCK2-203ENST00000476491 2092 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
NCLNQ969V3 SIGLEC15-201ENST00000389474 1573 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
NCLNQ969V3 PPP3CC-202ENST00000289963 2135 ntAPPRIS ALT1 TSL 1 (best) BASIC20.93■□□□□ 0.94
NCLNQ969V3 LMF1-202ENST00000543238 2103 ntTSL 2 BASIC20.93■□□□□ 0.94
NCLNQ969V3 DDN-AS1-202ENST00000547866 2114 ntTSL 3 BASIC20.93■□□□□ 0.94
NCLNQ969V3 CRHR1-202ENST00000314537 2535 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
NCLNQ969V3 EIF4EBP1-201ENST00000338825 1020 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
NCLNQ969V3 MYL5-208ENST00000511290 781 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
NCLNQ969V3 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC20.93■□□□□ 0.94
NCLNQ969V3 DCTD-201ENST00000357067 1931 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
NCLNQ969V3 KCNK15-201ENST00000372861 2599 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
NCLNQ969V3 KEAP1-202ENST00000393623 2648 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
NCLNQ969V3 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
NCLNQ969V3 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC20.93■□□□□ 0.94
NCLNQ969V3 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC20.93■□□□□ 0.94
NCLNQ969V3 ITPKC-201ENST00000263370 3385 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
NCLNQ969V3 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC20.93■□□□□ 0.94
NCLNQ969V3 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
NCLNQ969V3 PNRC1-201ENST00000336032 2065 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
NCLNQ969V3 WRAP73-201ENST00000270708 1665 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
NCLNQ969V3 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC20.93■□□□□ 0.94
NCLNQ969V3 KLHDC2-201ENST00000298307 5514 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
NCLNQ969V3 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC20.92■□□□□ 0.94
NCLNQ969V3 SLC35F5-203ENST00000409342 2284 ntTSL 2 BASIC20.92■□□□□ 0.94
NCLNQ969V3 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
NCLNQ969V3 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC20.92■□□□□ 0.94
NCLNQ969V3 AL139246.5-201ENST00000606645 996 ntBASIC20.92■□□□□ 0.94
NCLNQ969V3 AC092171.4-201ENST00000609130 632 ntBASIC20.92■□□□□ 0.94
NCLNQ969V3 AC110285.6-201ENST00000617652 491 ntBASIC20.92■□□□□ 0.94
NCLNQ969V3 CCDC166-201ENST00000542437 1320 ntAPPRIS P1 TSL 2 BASIC20.92■□□□□ 0.94
NCLNQ969V3 TMEM121-202ENST00000431372 1519 ntAPPRIS P1 TSL 5 BASIC20.92■□□□□ 0.94
NCLNQ969V3 GPRC5B-210ENST00000569847 1830 ntAPPRIS P2 TSL 2 BASIC20.92■□□□□ 0.94
NCLNQ969V3 KCNK6-201ENST00000263372 5722 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
NCLNQ969V3 ZNF568-208ENST00000586353 1902 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
NCLNQ969V3 PLPP5-209ENST00000529359 2185 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
NCLNQ969V3 RNF149-201ENST00000295317 2458 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
NCLNQ969V3 SLCO3A1-202ENST00000424469 2705 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
NCLNQ969V3 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC20.91■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 24.4 ms