Protein–RNA interactions for Protein: Q92738

USP6NL, USP6 N-terminal-like protein, humanhuman

Predictions only

Length 828 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP6NLQ92738 CAMTA1-216ENST00000557126 486 ntTSL 2 BASIC24.83■■□□□ 1.57
USP6NLQ92738 AC007216.1-201ENST00000570197 601 ntTSL 4 BASIC24.83■■□□□ 1.57
USP6NLQ92738 C19orf84-201ENST00000570516 788 ntAPPRIS ALT2 TSL 1 (best) BASIC24.83■■□□□ 1.57
USP6NLQ92738 ANTXR2-202ENST00000346652 1343 ntTSL 1 (best) BASIC24.83■■□□□ 1.56
USP6NLQ92738 KRT87P-202ENST00000534226 1464 ntBASIC24.83■■□□□ 1.56
USP6NLQ92738 KISS1R-201ENST00000234371 1625 ntAPPRIS P1 TSL 1 (best) BASIC24.83■■□□□ 1.56
USP6NLQ92738 CHST6-202ENST00000390664 2093 ntAPPRIS P1 TSL 1 (best) BASIC24.82■■□□□ 1.56
USP6NLQ92738 UCK2-201ENST00000367879 1375 ntAPPRIS P1 TSL 1 (best) BASIC24.82■■□□□ 1.56
USP6NLQ92738 MIR222HG-201ENST00000602461 1379 ntTSL 5 BASIC24.82■■□□□ 1.56
USP6NLQ92738 CAPN10-208ENST00000404753 2570 ntAPPRIS ALT2 TSL 5 BASIC24.82■■□□□ 1.56
USP6NLQ92738 HNRNPL-201ENST00000221419 2471 ntAPPRIS P1 TSL 1 (best) BASIC24.82■■□□□ 1.56
USP6NLQ92738 ST6GALNAC2-201ENST00000225276 2170 ntAPPRIS P1 TSL 1 (best) BASIC24.82■■□□□ 1.56
USP6NLQ92738 AL845552.2-201ENST00000553301 553 ntTSL 4 BASIC24.82■■□□□ 1.56
USP6NLQ92738 KRT18P6-201ENST00000555540 1265 ntBASIC24.82■■□□□ 1.56
USP6NLQ92738 HERC2P5-204ENST00000569697 1214 ntTSL 2 BASIC24.82■■□□□ 1.56
USP6NLQ92738 AC066615.1-201ENST00000640911 628 ntBASIC24.82■■□□□ 1.56
USP6NLQ92738 CEBPB-201ENST00000303004 1956 ntAPPRIS P1 BASIC24.82■■□□□ 1.56
USP6NLQ92738 JAGN1-201ENST00000307768 1693 ntAPPRIS P1 TSL 1 (best) BASIC24.81■■□□□ 1.56
USP6NLQ92738 PICALM-202ENST00000393346 2340 ntAPPRIS P3 TSL 1 (best) BASIC24.81■■□□□ 1.56
USP6NLQ92738 CPLX1-201ENST00000304062 2181 ntAPPRIS P1 TSL 1 (best) BASIC24.81■■□□□ 1.56
USP6NLQ92738 TBC1D10A-201ENST00000215790 2077 ntAPPRIS P3 TSL 1 (best) BASIC24.81■■□□□ 1.56
USP6NLQ92738 RAPGEF1-203ENST00000372195 6256 ntTSL 1 (best) BASIC24.81■■□□□ 1.56
USP6NLQ92738 FAM160B1-201ENST00000369246 666 ntTSL 2 BASIC24.81■■□□□ 1.56
USP6NLQ92738 IL15RA-208ENST00000397251 1046 ntAPPRIS ALT2 TSL 1 (best) BASIC24.81■■□□□ 1.56
USP6NLQ92738 KANSL1-AS1-201ENST00000398275 517 ntTSL 1 (best) BASIC24.81■■□□□ 1.56
USP6NLQ92738 OAS3-207ENST00000551007 998 ntTSL 2 BASIC24.81■■□□□ 1.56
USP6NLQ92738 KLF13-207ENST00000560473 489 ntTSL 3 BASIC24.81■■□□□ 1.56
USP6NLQ92738 AC106820.5-201ENST00000566085 789 ntTSL 3 BASIC24.81■■□□□ 1.56
USP6NLQ92738 IL15RA-221ENST00000620865 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC24.81■■□□□ 1.56
USP6NLQ92738 IL15RA-222ENST00000622442 1160 ntAPPRIS ALT2 TSL 1 (best) BASIC24.81■■□□□ 1.56
USP6NLQ92738 BASP1-203ENST00000616743 1711 ntAPPRIS P1 TSL 3 BASIC24.81■■□□□ 1.56
USP6NLQ92738 TMED2-201ENST00000262225 2560 ntAPPRIS P1 TSL 1 (best) BASIC24.8■■□□□ 1.56
USP6NLQ92738 TMEM218-201ENST00000279968 1034 ntAPPRIS P1 TSL 1 (best) BASIC24.8■■□□□ 1.56
USP6NLQ92738 BID-202ENST00000342111 854 ntTSL 1 (best) BASIC24.8■■□□□ 1.56
USP6NLQ92738 RORB-AS1-201ENST00000417576 1178 ntTSL 5 BASIC24.8■■□□□ 1.56
USP6NLQ92738 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC24.8■■□□□ 1.56
USP6NLQ92738 LINC01117-201ENST00000443670 699 ntTSL 5 BASIC24.8■■□□□ 1.56
USP6NLQ92738 PARP1-210ENST00000629232 477 ntTSL 5 BASIC24.8■■□□□ 1.56
USP6NLQ92738 TMCC2-209ENST00000637895 1455 ntTSL 1 (best) BASIC24.8■■□□□ 1.56
USP6NLQ92738 NELFB-201ENST00000343053 2698 ntAPPRIS ALT2 TSL 1 (best) BASIC24.8■■□□□ 1.56
USP6NLQ92738 SLC9A3-203ENST00000514375 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC24.8■■□□□ 1.56
USP6NLQ92738 EPCAM-202ENST00000405271 1530 ntTSL 5 BASIC24.8■■□□□ 1.56
USP6NLQ92738 CCDC157-202ENST00000399824 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC24.8■■□□□ 1.56
USP6NLQ92738 WDR86-201ENST00000334493 2023 ntAPPRIS P1 TSL 5 BASIC24.79■■□□□ 1.56
USP6NLQ92738 SPIRE1-203ENST00000410092 5533 ntAPPRIS P3 TSL 1 (best) BASIC24.79■■□□□ 1.56
USP6NLQ92738 NFS1-201ENST00000306750 738 ntTSL 1 (best) BASIC24.79■■□□□ 1.56
USP6NLQ92738 AC007322.1-201ENST00000426983 750 ntBASIC24.79■■□□□ 1.56
USP6NLQ92738 PACRGL-206ENST00000502374 1034 ntTSL 2 BASIC24.79■■□□□ 1.56
USP6NLQ92738 AL138781.1-201ENST00000566567 1274 ntBASIC24.79■■□□□ 1.56
USP6NLQ92738 UBE2DNL-204ENST00000602536 740 ntBASIC24.79■■□□□ 1.56
USP6NLQ92738 AC005181.1-201ENST00000604782 1256 ntBASIC24.79■■□□□ 1.56
USP6NLQ92738 SERBP1-202ENST00000370990 1621 ntAPPRIS ALT2 TSL 1 (best) BASIC24.79■■□□□ 1.56
USP6NLQ92738 MAP2K5-204ENST00000395476 1689 ntTSL 1 (best) BASIC24.78■■□□□ 1.56
USP6NLQ92738 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC24.78■■□□□ 1.56
USP6NLQ92738 AC009237.3-201ENST00000393279 1427 ntBASIC24.78■■□□□ 1.56
USP6NLQ92738 CORO1A-201ENST00000219150 1803 ntAPPRIS P1 TSL 1 (best) BASIC24.78■■□□□ 1.56
USP6NLQ92738 BHLHA15-201ENST00000314018 706 ntAPPRIS P1 BASIC24.78■■□□□ 1.56
USP6NLQ92738 ARL5A-202ENST00000428992 747 ntTSL 2 BASIC24.78■■□□□ 1.56
USP6NLQ92738 IDH1-AS1-202ENST00000448588 489 ntTSL 3 BASIC24.78■■□□□ 1.56
USP6NLQ92738 EDA-210ENST00000527388 927 ntTSL 1 (best) BASIC24.78■■□□□ 1.56
USP6NLQ92738 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC24.78■■□□□ 1.56
USP6NLQ92738 BHLHA15-202ENST00000609256 796 ntAPPRIS P1 TSL 3 BASIC24.78■■□□□ 1.56
USP6NLQ92738 TARDBP-228ENST00000629725 1031 ntTSL 5 BASIC24.78■■□□□ 1.56
USP6NLQ92738 SMOX-201ENST00000278795 2164 ntTSL 1 (best) BASIC24.78■■□□□ 1.56
USP6NLQ92738 AMZ2P1-201ENST00000397713 2259 ntTSL 1 (best) BASIC24.78■■□□□ 1.56
USP6NLQ92738 EZH2-206ENST00000478654 2522 ntTSL 5 BASIC24.77■■□□□ 1.56
USP6NLQ92738 MSX2-201ENST00000239243 2241 ntAPPRIS P1 TSL 1 (best) BASIC24.77■■□□□ 1.56
USP6NLQ92738 PARP1-202ENST00000366792 553 ntTSL 3 BASIC24.77■■□□□ 1.56
USP6NLQ92738 LYRM9-201ENST00000379102 501 ntAPPRIS P1 TSL 2 BASIC24.77■■□□□ 1.56
USP6NLQ92738 CT47A12-201ENST00000419982 1165 ntAPPRIS P1 TSL 1 (best) BASIC24.77■■□□□ 1.56
USP6NLQ92738 CMTM8-202ENST00000458535 996 ntTSL 1 (best) BASIC24.77■■□□□ 1.56
USP6NLQ92738 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC24.77■■□□□ 1.56
USP6NLQ92738 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC24.77■■□□□ 1.56
USP6NLQ92738 MVB12A-212ENST00000543795 1154 ntAPPRIS P1 TSL 5 BASIC24.77■■□□□ 1.56
USP6NLQ92738 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC24.77■■□□□ 1.56
USP6NLQ92738 EPO-201ENST00000252723 1330 ntAPPRIS P1 TSL 1 (best) BASIC24.77■■□□□ 1.56
USP6NLQ92738 CYP2A13-201ENST00000330436 1739 ntAPPRIS P1 TSL 1 (best) BASIC24.77■■□□□ 1.56
USP6NLQ92738 HACD3-205ENST00000562901 1797 ntTSL 5 BASIC24.77■■□□□ 1.56
USP6NLQ92738 MBOAT7-201ENST00000245615 2529 ntAPPRIS P1 TSL 1 (best) BASIC24.76■■□□□ 1.55
USP6NLQ92738 ZNF205-202ENST00000382192 2062 ntAPPRIS P1 TSL 1 (best) BASIC24.76■■□□□ 1.55
USP6NLQ92738 ABHD12B-201ENST00000337334 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC24.76■■□□□ 1.55
USP6NLQ92738 DUSP8P3-201ENST00000399571 1760 ntBASIC24.76■■□□□ 1.55
USP6NLQ92738 AC016888.1-201ENST00000585285 565 ntTSL 3 BASIC24.76■■□□□ 1.55
USP6NLQ92738 PNLIPRP2-204ENST00000591655 1456 ntAPPRIS ALT1 TSL 5 BASIC24.76■■□□□ 1.55
USP6NLQ92738 LINC00543-201ENST00000567234 1845 ntBASIC24.75■■□□□ 1.55
USP6NLQ92738 FMR1-AS1-202ENST00000596112 1845 ntTSL 1 (best) BASIC24.75■■□□□ 1.55
USP6NLQ92738 H19-210ENST00000439725 1929 ntTSL 2 BASIC24.75■■□□□ 1.55
USP6NLQ92738 HSF1-201ENST00000400780 2105 ntTSL 5 BASIC24.75■■□□□ 1.55
USP6NLQ92738 HMX1-202ENST00000506970 651 ntTSL 1 (best) BASIC24.75■■□□□ 1.55
USP6NLQ92738 AL731577.2-201ENST00000508096 555 ntTSL 2 BASIC24.75■■□□□ 1.55
USP6NLQ92738 NDUFS3-207ENST00000529276 558 ntTSL 2 BASIC24.75■■□□□ 1.55
USP6NLQ92738 TP53I11-215ENST00000531928 1078 ntTSL 3 BASIC24.75■■□□□ 1.55
USP6NLQ92738 UNC119-202ENST00000335765 1424 ntAPPRIS P1 TSL 1 (best) BASIC24.75■■□□□ 1.55
USP6NLQ92738 PIM3-201ENST00000360612 2369 ntAPPRIS P1 TSL 1 (best) BASIC24.75■■□□□ 1.55
USP6NLQ92738 VIL1-204ENST00000440053 1454 ntTSL 1 (best) BASIC24.75■■□□□ 1.55
USP6NLQ92738 AP000802.1-201ENST00000500537 1934 ntTSL 1 (best) BASIC24.74■■□□□ 1.55
USP6NLQ92738 MAZ-202ENST00000322945 2532 ntAPPRIS ALT2 TSL 1 (best) BASIC24.74■■□□□ 1.55
USP6NLQ92738 EFNA2-201ENST00000215368 949 ntAPPRIS P1 TSL 1 (best) BASIC24.74■■□□□ 1.55
USP6NLQ92738 MCHR1-202ENST00000381433 1219 ntTSL 1 (best) BASIC24.74■■□□□ 1.55
USP6NLQ92738 EIF5A-205ENST00000419711 1271 ntAPPRIS P1 TSL 1 (best) BASIC24.74■■□□□ 1.55
Retrieved 100 of 98,524 protein–RNA pairs in 35.5 ms