Protein–RNA interactions for Protein: Q8WWV3

RTN4IP1, Reticulon-4-interacting protein 1, mitochondrial, humanhuman

Predicted RBP Predictions only

Length 396 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4IP1Q8WWV3 DTWD2-204ENST00000515439 1275 ntTSL 5 BASIC18.25■□□□□ 0.51
RTN4IP1Q8WWV3 MIR6724-1-201ENST00000616420 92 ntBASIC18.25■□□□□ 0.51
RTN4IP1Q8WWV3 MIR6724-2-201ENST00000616483 92 ntBASIC18.25■□□□□ 0.51
RTN4IP1Q8WWV3 MIR6724-4-201ENST00000617390 92 ntBASIC18.25■□□□□ 0.51
RTN4IP1Q8WWV3 MIR6724-3-201ENST00000622482 92 ntBASIC18.25■□□□□ 0.51
RTN4IP1Q8WWV3 DNAJA4-202ENST00000394852 3116 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
RTN4IP1Q8WWV3 ZNF410-206ENST00000540593 1722 ntTSL 2 BASIC18.25■□□□□ 0.51
RTN4IP1Q8WWV3 OAF-201ENST00000328965 2525 ntAPPRIS P2 TSL 1 (best) BASIC18.25■□□□□ 0.51
RTN4IP1Q8WWV3 PDZRN4-202ENST00000402685 3347 ntAPPRIS P1 TSL 2 BASIC18.25■□□□□ 0.51
RTN4IP1Q8WWV3 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC18.25■□□□□ 0.51
RTN4IP1Q8WWV3 C11orf63-201ENST00000227349 3147 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
RTN4IP1Q8WWV3 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC18.24■□□□□ 0.51
RTN4IP1Q8WWV3 LRIG1-201ENST00000273261 5273 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
RTN4IP1Q8WWV3 TEAD2-201ENST00000311227 2164 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
RTN4IP1Q8WWV3 AC144652.1-201ENST00000609974 1624 ntBASIC18.24■□□□□ 0.51
RTN4IP1Q8WWV3 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
RTN4IP1Q8WWV3 KISS1-201ENST00000367194 709 ntAPPRIS P2 TSL 1 (best) BASIC18.24■□□□□ 0.51
RTN4IP1Q8WWV3 ADAMTS13-203ENST00000371910 1074 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
RTN4IP1Q8WWV3 PEMT-202ENST00000395781 1050 ntTSL 2 BASIC18.24■□□□□ 0.51
RTN4IP1Q8WWV3 AL117209.1-201ENST00000560931 828 ntTSL 3 BASIC18.24■□□□□ 0.51
RTN4IP1Q8WWV3 CCDC194-202ENST00000636079 705 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
RTN4IP1Q8WWV3 ODF3L2-201ENST00000315489 1604 ntAPPRIS P2 TSL 1 (best) BASIC18.23■□□□□ 0.51
RTN4IP1Q8WWV3 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC18.23■□□□□ 0.51
RTN4IP1Q8WWV3 RAP1B-207ENST00000450214 1466 ntTSL 2 BASIC18.23■□□□□ 0.51
RTN4IP1Q8WWV3 CAMK2N2-201ENST00000296238 1362 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
RTN4IP1Q8WWV3 ANAPC13-201ENST00000354910 1209 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
RTN4IP1Q8WWV3 C9orf47-202ENST00000375850 859 ntAPPRIS ALT2 TSL 3 BASIC18.23■□□□□ 0.51
RTN4IP1Q8WWV3 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC18.23■□□□□ 0.51
RTN4IP1Q8WWV3 MESP1-201ENST00000300057 2369 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
RTN4IP1Q8WWV3 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
RTN4IP1Q8WWV3 TFG-201ENST00000240851 1978 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
RTN4IP1Q8WWV3 PEX10-202ENST00000447513 1997 ntAPPRIS P2 TSL 1 (best) BASIC18.22■□□□□ 0.51
RTN4IP1Q8WWV3 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC18.22■□□□□ 0.51
RTN4IP1Q8WWV3 PSMD7-201ENST00000219313 1670 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
RTN4IP1Q8WWV3 PLPP1-202ENST00000307259 1597 ntAPPRIS ALT1 TSL 1 (best) BASIC18.22■□□□□ 0.51
RTN4IP1Q8WWV3 TMEM198B-205ENST00000487582 1581 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
RTN4IP1Q8WWV3 NAGPA-202ENST00000381955 2100 ntTSL 5 BASIC18.22■□□□□ 0.51
RTN4IP1Q8WWV3 UBALD1-206ENST00000590965 1462 ntTSL 2 BASIC18.22■□□□□ 0.51
RTN4IP1Q8WWV3 GTPBP6-201ENST00000326153 1907 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
RTN4IP1Q8WWV3 PLPP2-202ENST00000327790 1397 ntTSL 5 BASIC18.22■□□□□ 0.51
RTN4IP1Q8WWV3 MMEL1-206ENST00000502556 1943 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
RTN4IP1Q8WWV3 CFD-202ENST00000592860 809 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
RTN4IP1Q8WWV3 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
RTN4IP1Q8WWV3 RASGRP1-201ENST00000310803 5023 ntAPPRIS P2 TSL 1 (best) BASIC18.22■□□□□ 0.51
RTN4IP1Q8WWV3 RASGRP1-204ENST00000539159 5021 ntAPPRIS ALT1 TSL 5 BASIC18.22■□□□□ 0.51
RTN4IP1Q8WWV3 FAM20C-201ENST00000313766 2751 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
RTN4IP1Q8WWV3 ZDHHC20-203ENST00000400590 1869 ntAPPRIS ALT2 TSL 5 BASIC18.22■□□□□ 0.51
RTN4IP1Q8WWV3 LINC01116-201ENST00000295549 1407 ntTSL 2 BASIC18.22■□□□□ 0.51
RTN4IP1Q8WWV3 AC133065.2-201ENST00000573379 2147 ntTSL 2 BASIC18.22■□□□□ 0.51
RTN4IP1Q8WWV3 AC012645.1-201ENST00000515455 1650 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
RTN4IP1Q8WWV3 PPP3CC-201ENST00000240139 2189 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
RTN4IP1Q8WWV3 PTDSS2-201ENST00000308020 2445 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
RTN4IP1Q8WWV3 FAM193B-217ENST00000514747 2913 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
RTN4IP1Q8WWV3 ZC3H14-223ENST00000557607 1983 ntTSL 5 BASIC18.21■□□□□ 0.51
RTN4IP1Q8WWV3 ESYT2-201ENST00000251527 5960 ntAPPRIS P2 TSL 1 (best) BASIC18.21■□□□□ 0.51
RTN4IP1Q8WWV3 C20orf27-202ENST00000379772 1886 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
RTN4IP1Q8WWV3 SPAG16-201ENST00000272898 1059 ntTSL 5 BASIC18.21■□□□□ 0.51
RTN4IP1Q8WWV3 AC055876.1-201ENST00000430589 895 ntTSL 2 BASIC18.21■□□□□ 0.51
RTN4IP1Q8WWV3 TUBBP5-204ENST00000635438 565 ntTSL 4 BASIC18.21■□□□□ 0.51
RTN4IP1Q8WWV3 RBM38-203ENST00000356208 2382 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
RTN4IP1Q8WWV3 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC18.21■□□□□ 0.51
RTN4IP1Q8WWV3 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
RTN4IP1Q8WWV3 SYNGR2-201ENST00000225777 2325 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
RTN4IP1Q8WWV3 PLPP7-202ENST00000372264 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
RTN4IP1Q8WWV3 AC080112.2-201ENST00000578774 2094 ntTSL 4 BASIC18.21■□□□□ 0.51
RTN4IP1Q8WWV3 C16orf58-209ENST00000567994 1845 ntTSL 5 BASIC18.21■□□□□ 0.51
RTN4IP1Q8WWV3 FAM99A-202ENST00000538190 1989 ntBASIC18.21■□□□□ 0.5
RTN4IP1Q8WWV3 FBXO27-202ENST00000509137 2130 ntAPPRIS P2 TSL 1 (best) BASIC18.2■□□□□ 0.5
RTN4IP1Q8WWV3 STK11-205ENST00000586243 2777 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
RTN4IP1Q8WWV3 ZYG11B-202ENST00000545132 2294 ntTSL 2 BASIC18.2■□□□□ 0.5
RTN4IP1Q8WWV3 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
RTN4IP1Q8WWV3 SLC35C1-202ENST00000442528 1756 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
RTN4IP1Q8WWV3 IGSF21-201ENST00000251296 1943 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
RTN4IP1Q8WWV3 EPDR1-202ENST00000423717 638 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
RTN4IP1Q8WWV3 AC103702.2-201ENST00000433510 1270 ntTSL 2 BASIC18.2■□□□□ 0.5
RTN4IP1Q8WWV3 AC092343.1-201ENST00000500224 729 ntTSL 3 BASIC18.2■□□□□ 0.5
RTN4IP1Q8WWV3 GRAMD4P7-201ENST00000578182 1232 ntBASIC18.2■□□□□ 0.5
RTN4IP1Q8WWV3 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC18.2■□□□□ 0.5
RTN4IP1Q8WWV3 MMP28-203ENST00000612672 1092 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
RTN4IP1Q8WWV3 DACT1-204ENST00000541264 2610 ntAPPRIS ALT2 TSL 2 BASIC18.2■□□□□ 0.5
RTN4IP1Q8WWV3 GLT8D2-205ENST00000548660 1835 ntAPPRIS P1 TSL 2 BASIC18.2■□□□□ 0.5
RTN4IP1Q8WWV3 THEM6-201ENST00000336138 2259 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
RTN4IP1Q8WWV3 DAPK3-202ENST00000545797 2257 ntAPPRIS P1 TSL 2 BASIC18.2■□□□□ 0.5
RTN4IP1Q8WWV3 XBP1-201ENST00000216037 1850 ntAPPRIS P2 TSL 1 (best) BASIC18.2■□□□□ 0.5
RTN4IP1Q8WWV3 TOX2-201ENST00000341197 1880 ntAPPRIS P1 TSL 2 BASIC18.2■□□□□ 0.5
RTN4IP1Q8WWV3 FGFR2-211ENST00000369059 3003 ntTSL 5 BASIC18.2■□□□□ 0.5
RTN4IP1Q8WWV3 AVPR2-201ENST00000337474 1622 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
RTN4IP1Q8WWV3 ANKRD44-204ENST00000409919 1622 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
RTN4IP1Q8WWV3 SNUPN-207ENST00000567134 1641 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
RTN4IP1Q8WWV3 RBM42-203ENST00000588161 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC18.2■□□□□ 0.5
RTN4IP1Q8WWV3 ST3GAL4-215ENST00000532243 1825 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
RTN4IP1Q8WWV3 PALM-208ENST00000592155 2272 ntTSL 4 BASIC18.19■□□□□ 0.5
RTN4IP1Q8WWV3 PPP4R2-201ENST00000356692 4984 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
RTN4IP1Q8WWV3 ACHE-201ENST00000241069 2172 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
RTN4IP1Q8WWV3 RAB32-201ENST00000367495 1217 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
RTN4IP1Q8WWV3 MXRA8-203ENST00000445648 2001 ntTSL 2 BASIC18.19■□□□□ 0.5
RTN4IP1Q8WWV3 AC004540.2-202ENST00000451264 508 ntTSL 2 BASIC18.19■□□□□ 0.5
RTN4IP1Q8WWV3 DTWD2-203ENST00000510708 2307 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
RTN4IP1Q8WWV3 INAFM2-202ENST00000638170 3052 ntAPPRIS P1 BASIC18.19■□□□□ 0.5
RTN4IP1Q8WWV3 AC010542.4-201ENST00000563151 1910 ntBASIC18.19■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 19.5 ms