Protein–RNA interactions for Protein: Q8TEC5

SH3RF2, Putative E3 ubiquitin-protein ligase SH3RF2, humanhuman

Predictions only

Length 729 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH3RF2Q8TEC5 DACT3-201ENST00000300875 2526 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
SH3RF2Q8TEC5 DLL3-201ENST00000205143 2332 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
SH3RF2Q8TEC5 PEBP1-201ENST00000261313 1697 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
SH3RF2Q8TEC5 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
SH3RF2Q8TEC5 LDB1-201ENST00000361198 2285 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
SH3RF2Q8TEC5 ACTR1B-201ENST00000289228 2243 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
SH3RF2Q8TEC5 DONSON-204ENST00000432378 1618 ntTSL 5 BASIC22.65■■□□□ 1.22
SH3RF2Q8TEC5 TESC-201ENST00000335209 1041 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
SH3RF2Q8TEC5 PGAP3-204ENST00000429199 970 ntTSL 2 BASIC22.65■■□□□ 1.22
SH3RF2Q8TEC5 NDUFB2-207ENST00000465506 1101 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
SH3RF2Q8TEC5 C17orf49-202ENST00000546495 996 ntAPPRIS ALT1 TSL 2 BASIC22.65■■□□□ 1.22
SH3RF2Q8TEC5 ZNF511-202ENST00000361518 1520 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
SH3RF2Q8TEC5 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC22.65■■□□□ 1.22
SH3RF2Q8TEC5 MAL2-204ENST00000614891 2818 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
SH3RF2Q8TEC5 AC092068.2-201ENST00000590491 1708 ntBASIC22.65■■□□□ 1.22
SH3RF2Q8TEC5 ZNF213-208ENST00000576416 2240 ntAPPRIS P1 TSL 2 BASIC22.65■■□□□ 1.22
SH3RF2Q8TEC5 LTK-203ENST00000453182 2412 ntTSL 2 BASIC22.65■■□□□ 1.22
SH3RF2Q8TEC5 AKT1-201ENST00000349310 2866 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.22
SH3RF2Q8TEC5 C9orf163-202ENST00000624034 2573 ntBASIC22.64■■□□□ 1.22
SH3RF2Q8TEC5 IQCJ-SCHIP1-201ENST00000412423 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC22.64■■□□□ 1.22
SH3RF2Q8TEC5 HOMER3-204ENST00000539827 1979 ntAPPRIS P3 TSL 1 (best) BASIC22.64■■□□□ 1.21
SH3RF2Q8TEC5 NFKBIB-201ENST00000313582 1159 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
SH3RF2Q8TEC5 GRPEL2-202ENST00000416916 1006 ntTSL 2 BASIC22.64■■□□□ 1.21
SH3RF2Q8TEC5 ARHGAP24-206ENST00000503995 1273 ntTSL 1 (best) BASIC22.64■■□□□ 1.21
SH3RF2Q8TEC5 EDA-209ENST00000525810 843 ntTSL 1 (best) BASIC22.64■■□□□ 1.21
SH3RF2Q8TEC5 AC011825.4-201ENST00000582233 473 ntTSL 2 BASIC22.64■■□□□ 1.21
SH3RF2Q8TEC5 AC011511.3-201ENST00000587088 355 ntTSL 2 BASIC22.64■■□□□ 1.21
SH3RF2Q8TEC5 CIRBP-222ENST00000589235 1073 ntAPPRIS ALT1 TSL 2 BASIC22.64■■□□□ 1.21
SH3RF2Q8TEC5 RNF114-202ENST00000622920 1284 ntTSL 5 BASIC22.64■■□□□ 1.21
SH3RF2Q8TEC5 DISC1-224ENST00000639374 1071 ntAPPRIS ALT2 TSL 1 (best) BASIC22.64■■□□□ 1.21
SH3RF2Q8TEC5 DUSP8P3-201ENST00000399571 1760 ntBASIC22.63■■□□□ 1.21
SH3RF2Q8TEC5 HOXA10-206ENST00000613671 2175 ntTSL 5 BASIC22.63■■□□□ 1.21
SH3RF2Q8TEC5 EGR3-203ENST00000519492 1500 ntTSL 5 BASIC22.63■■□□□ 1.21
SH3RF2Q8TEC5 TNFRSF10B-202ENST00000347739 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC22.63■■□□□ 1.21
SH3RF2Q8TEC5 IGFBP1-201ENST00000275525 1653 ntAPPRIS P2 TSL 1 (best) BASIC22.63■■□□□ 1.21
SH3RF2Q8TEC5 RAB28-208ENST00000630951 1679 ntTSL 5 BASIC22.63■■□□□ 1.21
SH3RF2Q8TEC5 CD47-202ENST00000361309 1285 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
SH3RF2Q8TEC5 VGLL4-208ENST00000424529 1025 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
SH3RF2Q8TEC5 PRELID2-204ENST00000505416 738 ntAPPRIS P2 TSL 3 BASIC22.63■■□□□ 1.21
SH3RF2Q8TEC5 KRT18P61-201ENST00000585825 1298 ntBASIC22.63■■□□□ 1.21
SH3RF2Q8TEC5 AC007773.1-201ENST00000592680 972 ntTSL 2 BASIC22.63■■□□□ 1.21
SH3RF2Q8TEC5 CTAG1A-201ENST00000593606 993 ntTSL 5 BASIC22.63■■□□□ 1.21
SH3RF2Q8TEC5 AP001160.5-201ENST00000636508 485 ntAPPRIS P1 BASIC22.63■■□□□ 1.21
SH3RF2Q8TEC5 RANBP10-206ENST00000602677 2374 ntTSL 5 BASIC22.62■■□□□ 1.21
SH3RF2Q8TEC5 SIX3-201ENST00000260653 2523 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
SH3RF2Q8TEC5 ACYP2-201ENST00000303536 789 ntTSL 2 BASIC22.62■■□□□ 1.21
SH3RF2Q8TEC5 FNDC3B-204ENST00000421757 946 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
SH3RF2Q8TEC5 ASRGL1-210ENST00000534571 639 ntTSL 2 BASIC22.62■■□□□ 1.21
SH3RF2Q8TEC5 TMEM182-210ENST00000639249 1025 ntTSL 5 BASIC22.62■■□□□ 1.21
SH3RF2Q8TEC5 RAX-201ENST00000256852 2935 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
SH3RF2Q8TEC5 AC133561.1-201ENST00000568600 2415 ntBASIC22.61■■□□□ 1.21
SH3RF2Q8TEC5 PRR7-201ENST00000323249 1480 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
SH3RF2Q8TEC5 MPND-202ENST00000359935 1475 ntAPPRIS ALT2 TSL 2 BASIC22.61■■□□□ 1.21
SH3RF2Q8TEC5 KRTAP17-1-201ENST00000334202 779 ntAPPRIS P1 BASIC22.61■■□□□ 1.21
SH3RF2Q8TEC5 CNPY3-201ENST00000372836 1704 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
SH3RF2Q8TEC5 AC073343.2-201ENST00000413182 548 ntTSL 4 BASIC22.61■■□□□ 1.21
SH3RF2Q8TEC5 DLX3-202ENST00000512495 834 ntTSL 2 BASIC22.61■■□□□ 1.21
SH3RF2Q8TEC5 AC068385.1-201ENST00000533218 409 ntTSL 3 BASIC22.61■■□□□ 1.21
SH3RF2Q8TEC5 GABARAPL2-205ENST00000568455 646 ntTSL 3 BASIC22.61■■□□□ 1.21
SH3RF2Q8TEC5 FRMD8-203ENST00000416776 1818 ntTSL 2 BASIC22.61■■□□□ 1.21
SH3RF2Q8TEC5 PDLIM3-203ENST00000284771 1672 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
SH3RF2Q8TEC5 ZPBP2-201ENST00000348931 1543 ntAPPRIS P4 TSL 1 (best) BASIC22.61■■□□□ 1.21
SH3RF2Q8TEC5 ME2-208ENST00000638937 2471 ntTSL 5 BASIC22.6■■□□□ 1.21
SH3RF2Q8TEC5 SIN3B-209ENST00000596802 2556 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
SH3RF2Q8TEC5 AGAP3-201ENST00000335367 2675 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
SH3RF2Q8TEC5 BMP6-201ENST00000283147 2780 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
SH3RF2Q8TEC5 CERS4-205ENST00000558331 1803 ntTSL 5 BASIC22.6■■□□□ 1.21
SH3RF2Q8TEC5 UBE2D3-201ENST00000321805 1087 ntAPPRIS ALT1 TSL 5 BASIC22.6■■□□□ 1.21
SH3RF2Q8TEC5 ME3-201ENST00000323418 1068 ntTSL 5 BASIC22.6■■□□□ 1.21
SH3RF2Q8TEC5 MPRIP-203ENST00000395806 527 ntTSL 3 BASIC22.6■■□□□ 1.21
SH3RF2Q8TEC5 CAMKMT-202ENST00000402247 665 ntTSL 2 BASIC22.6■■□□□ 1.21
SH3RF2Q8TEC5 C16orf86-201ENST00000403458 1267 ntAPPRIS P2 TSL 1 (best) BASIC22.6■■□□□ 1.21
SH3RF2Q8TEC5 AC140479.5-201ENST00000568189 735 ntTSL 3 BASIC22.6■■□□□ 1.21
SH3RF2Q8TEC5 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC22.6■■□□□ 1.21
SH3RF2Q8TEC5 MFSD7-201ENST00000322224 2123 ntAPPRIS P3 TSL 1 (best) BASIC22.59■■□□□ 1.21
SH3RF2Q8TEC5 COX20-201ENST00000366528 568 ntTSL 2 BASIC22.59■■□□□ 1.21
SH3RF2Q8TEC5 ADAMTS13-204ENST00000371911 1155 ntTSL 1 (best) BASIC22.59■■□□□ 1.21
SH3RF2Q8TEC5 IDNK-204ENST00000454393 1210 ntTSL 3 BASIC22.59■■□□□ 1.21
SH3RF2Q8TEC5 AC012414.4-201ENST00000560839 1074 ntTSL 5 BASIC22.59■■□□□ 1.21
SH3RF2Q8TEC5 GALNS-213ENST00000569433 723 ntTSL 3 BASIC22.59■■□□□ 1.21
SH3RF2Q8TEC5 AC243773.2-201ENST00000616341 490 ntTSL 2 BASIC22.59■■□□□ 1.21
SH3RF2Q8TEC5 AC060814.5-201ENST00000630916 1074 ntTSL 2 BASIC22.59■■□□□ 1.21
SH3RF2Q8TEC5 ZYX-201ENST00000322764 2493 ntAPPRIS P2 TSL 1 (best) BASIC22.59■■□□□ 1.21
SH3RF2Q8TEC5 PDLIM2-202ENST00000308354 2236 ntTSL 1 (best) BASIC22.59■■□□□ 1.21
SH3RF2Q8TEC5 PDLIM2-203ENST00000339162 2226 ntTSL 1 (best) BASIC22.59■■□□□ 1.21
SH3RF2Q8TEC5 CDC16-206ENST00000375310 2156 ntTSL 1 (best) BASIC22.59■■□□□ 1.21
SH3RF2Q8TEC5 CEBPD-201ENST00000408965 2178 ntAPPRIS P1 BASIC22.59■■□□□ 1.21
SH3RF2Q8TEC5 FAM86JP-203ENST00000485843 2012 ntTSL 1 (best) BASIC22.58■■□□□ 1.21
SH3RF2Q8TEC5 CACNB1-203ENST00000394310 1753 ntAPPRIS ALT1 TSL 1 (best) BASIC22.58■■□□□ 1.21
SH3RF2Q8TEC5 AC090377.1-201ENST00000585691 1762 ntTSL 3 BASIC22.58■■□□□ 1.21
SH3RF2Q8TEC5 CCDC154-201ENST00000389176 2212 ntAPPRIS P5 TSL 5 BASIC22.58■■□□□ 1.21
SH3RF2Q8TEC5 RASL12-202ENST00000421977 1523 ntTSL 2 BASIC22.58■■□□□ 1.21
SH3RF2Q8TEC5 MLNR-201ENST00000218721 1239 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
SH3RF2Q8TEC5 TMEM218-207ENST00000528724 1117 ntTSL 5 BASIC22.58■■□□□ 1.21
SH3RF2Q8TEC5 TMEM218-214ENST00000532156 954 ntTSL 1 (best) BASIC22.58■■□□□ 1.21
SH3RF2Q8TEC5 PCDH1-204ENST00000503492 2373 ntTSL 5 BASIC22.58■■□□□ 1.21
SH3RF2Q8TEC5 RAB24-202ENST00000303270 1385 ntTSL 2 BASIC22.58■■□□□ 1.21
SH3RF2Q8TEC5 MEIOB-202ENST00000397344 1792 ntTSL 5 BASIC22.58■■□□□ 1.2
SH3RF2Q8TEC5 ANKRD54-201ENST00000215941 2184 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
SH3RF2Q8TEC5 CCDC47-204ENST00000582252 1719 ntTSL 2 BASIC22.57■■□□□ 1.2
Retrieved 100 of 98,524 protein–RNA pairs in 15.1 ms