Protein–RNA interactions for Protein: Q8TBC3

SHKBP1, SH3KBP1-binding protein 1, humanhuman

Predictions only

Length 707 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1Q8TBC3 TRIM2-212ENST00000632856 656 ntTSL 3 BASIC22.92■■□□□ 1.26
SHKBP1Q8TBC3 DXO-201ENST00000337523 1628 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
SHKBP1Q8TBC3 PLEKHB1-201ENST00000227214 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC22.92■■□□□ 1.26
SHKBP1Q8TBC3 AZIN2-204ENST00000373443 2048 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
SHKBP1Q8TBC3 ZNF419-203ENST00000354197 1569 ntTSL 5 BASIC22.92■■□□□ 1.26
SHKBP1Q8TBC3 C18orf65-201ENST00000622985 2076 ntTSL 2 BASIC22.91■■□□□ 1.26
SHKBP1Q8TBC3 PTP4A3-204ENST00000521578 1717 ntAPPRIS P1 TSL 5 BASIC22.91■■□□□ 1.26
SHKBP1Q8TBC3 RAB28-208ENST00000630951 1679 ntTSL 5 BASIC22.91■■□□□ 1.26
SHKBP1Q8TBC3 AKT1-201ENST00000349310 2866 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
SHKBP1Q8TBC3 MPRIP-203ENST00000395806 527 ntTSL 3 BASIC22.91■■□□□ 1.26
SHKBP1Q8TBC3 AC010141.3-201ENST00000456659 717 ntBASIC22.91■■□□□ 1.26
SHKBP1Q8TBC3 VPS53-216ENST00000574029 585 ntTSL 4 BASIC22.91■■□□□ 1.26
SHKBP1Q8TBC3 AC011511.3-201ENST00000587088 355 ntTSL 2 BASIC22.91■■□□□ 1.26
SHKBP1Q8TBC3 PDIA6-207ENST00000540494 2509 ntAPPRIS ALT1 TSL 2 BASIC22.91■■□□□ 1.26
SHKBP1Q8TBC3 CORO1A-201ENST00000219150 1803 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
SHKBP1Q8TBC3 PCSK6-215ENST00000611967 3336 ntTSL 1 (best) BASIC22.91■■□□□ 1.26
SHKBP1Q8TBC3 CYHR1-201ENST00000306145 1409 ntTSL 1 (best) BASIC22.91■■□□□ 1.26
SHKBP1Q8TBC3 H2AFY-217ENST00000511689 2789 ntAPPRIS P4 TSL 1 (best) BASIC22.9■■□□□ 1.26
SHKBP1Q8TBC3 HSD11B2-201ENST00000326152 1900 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
SHKBP1Q8TBC3 SPON2-222ENST00000617421 2156 ntAPPRIS P1 TSL 5 BASIC22.9■■□□□ 1.26
SHKBP1Q8TBC3 TBX1-202ENST00000332710 2084 ntAPPRIS P4 TSL 1 (best) BASIC22.9■■□□□ 1.26
SHKBP1Q8TBC3 PCSK1N-201ENST00000218230 1050 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
SHKBP1Q8TBC3 ACYP2-201ENST00000303536 789 ntTSL 2 BASIC22.9■■□□□ 1.26
SHKBP1Q8TBC3 AC073343.2-201ENST00000413182 548 ntTSL 4 BASIC22.9■■□□□ 1.26
SHKBP1Q8TBC3 VGLL4-208ENST00000424529 1025 ntTSL 1 (best) BASIC22.9■■□□□ 1.26
SHKBP1Q8TBC3 IDNK-204ENST00000454393 1210 ntTSL 3 BASIC22.9■■□□□ 1.26
SHKBP1Q8TBC3 TMEM121-201ENST00000392519 1532 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
SHKBP1Q8TBC3 BX005040.4-201ENST00000637145 1518 ntBASIC22.9■■□□□ 1.26
SHKBP1Q8TBC3 VSTM4-201ENST00000298454 2170 ntAPPRIS P3 TSL 2 BASIC22.9■■□□□ 1.26
SHKBP1Q8TBC3 DTNB-206ENST00000404103 2384 ntAPPRIS ALT2 TSL 5 BASIC22.9■■□□□ 1.26
SHKBP1Q8TBC3 LYRM1-201ENST00000219168 1626 ntAPPRIS P1 TSL 2 BASIC22.9■■□□□ 1.26
SHKBP1Q8TBC3 CCSER2-202ENST00000359979 2066 ntTSL 1 (best) BASIC22.89■■□□□ 1.26
SHKBP1Q8TBC3 KCNK13-201ENST00000282146 2522 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.26
SHKBP1Q8TBC3 IL17RE-201ENST00000383814 2704 ntAPPRIS P2 TSL 1 (best) BASIC22.89■■□□□ 1.26
SHKBP1Q8TBC3 TMEM102-201ENST00000323206 1973 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.26
SHKBP1Q8TBC3 TMEM102-202ENST00000396568 1962 ntAPPRIS P1 TSL 2 BASIC22.89■■□□□ 1.26
SHKBP1Q8TBC3 CAPN12-212ENST00000601953 2381 ntTSL 5 BASIC22.89■■□□□ 1.26
SHKBP1Q8TBC3 RNF223-201ENST00000453464 1902 ntAPPRIS P1 TSL 2 BASIC22.89■■□□□ 1.25
SHKBP1Q8TBC3 UBE2D3-201ENST00000321805 1087 ntAPPRIS ALT1 TSL 5 BASIC22.89■■□□□ 1.25
SHKBP1Q8TBC3 SOCS1-201ENST00000332029 1225 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.25
SHKBP1Q8TBC3 SMUG1P1-201ENST00000590640 811 ntBASIC22.89■■□□□ 1.25
SHKBP1Q8TBC3 AC087239.1-201ENST00000622671 572 ntBASIC22.89■■□□□ 1.25
SHKBP1Q8TBC3 MAP2K5-204ENST00000395476 1689 ntTSL 1 (best) BASIC22.89■■□□□ 1.25
SHKBP1Q8TBC3 IRX5-201ENST00000320990 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC22.89■■□□□ 1.25
SHKBP1Q8TBC3 KLC1-201ENST00000246489 2294 ntAPPRIS P1 TSL 5 BASIC22.89■■□□□ 1.25
SHKBP1Q8TBC3 KLC1-224ENST00000557450 2265 ntTSL 5 BASIC22.89■■□□□ 1.25
SHKBP1Q8TBC3 ME2-208ENST00000638937 2471 ntTSL 5 BASIC22.89■■□□□ 1.25
SHKBP1Q8TBC3 RBPMS2-201ENST00000300069 2008 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.25
SHKBP1Q8TBC3 KIF2A-202ENST00000401507 2539 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
SHKBP1Q8TBC3 ECE2-202ENST00000357474 2667 ntTSL 1 (best) BASIC22.88■■□□□ 1.25
SHKBP1Q8TBC3 SLC35B2-201ENST00000393810 1898 ntTSL 2 BASIC22.88■■□□□ 1.25
SHKBP1Q8TBC3 OSCAR-209ENST00000616215 2016 ntAPPRIS ALT2 TSL 5 BASIC22.88■■□□□ 1.25
SHKBP1Q8TBC3 AC012414.4-201ENST00000560839 1074 ntTSL 5 BASIC22.88■■□□□ 1.25
SHKBP1Q8TBC3 AC012313.1-203ENST00000597980 570 ntTSL 4 BASIC22.88■■□□□ 1.25
SHKBP1Q8TBC3 AC060814.5-201ENST00000630916 1074 ntTSL 2 BASIC22.88■■□□□ 1.25
SHKBP1Q8TBC3 ZFAND4-205ENST00000374371 2283 ntTSL 5 BASIC22.88■■□□□ 1.25
SHKBP1Q8TBC3 SMUG1-215ENST00000508394 1697 ntAPPRIS P1 TSL 2 BASIC22.87■■□□□ 1.25
SHKBP1Q8TBC3 UQCR11-203ENST00000591899 1324 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
SHKBP1Q8TBC3 FNDC11-204ENST00000615526 2954 ntAPPRIS P1 BASIC22.87■■□□□ 1.25
SHKBP1Q8TBC3 NIPSNAP2-201ENST00000322090 1999 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
SHKBP1Q8TBC3 KCTD15-207ENST00000589786 1625 ntAPPRIS P1 TSL 2 BASIC22.87■■□□□ 1.25
SHKBP1Q8TBC3 MID1IP1-203ENST00000457894 1902 ntAPPRIS P1 TSL 3 BASIC22.87■■□□□ 1.25
SHKBP1Q8TBC3 SNX18-201ENST00000326277 2063 ntTSL 2 BASIC22.87■■□□□ 1.25
SHKBP1Q8TBC3 TESC-201ENST00000335209 1041 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
SHKBP1Q8TBC3 AC140479.5-201ENST00000568189 735 ntTSL 3 BASIC22.87■■□□□ 1.25
SHKBP1Q8TBC3 GABARAPL2-205ENST00000568455 646 ntTSL 3 BASIC22.87■■□□□ 1.25
SHKBP1Q8TBC3 GALNS-213ENST00000569433 723 ntTSL 3 BASIC22.87■■□□□ 1.25
SHKBP1Q8TBC3 C5orf49-201ENST00000399810 2385 ntAPPRIS P2 TSL 1 (best) BASIC22.87■■□□□ 1.25
SHKBP1Q8TBC3 ZNF511-202ENST00000361518 1520 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
SHKBP1Q8TBC3 PARP9-207ENST00000492382 1837 ntTSL 1 (best) BASIC22.87■■□□□ 1.25
SHKBP1Q8TBC3 NPHS2-201ENST00000367615 1855 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
SHKBP1Q8TBC3 C9orf163-202ENST00000624034 2573 ntBASIC22.86■■□□□ 1.25
SHKBP1Q8TBC3 SLC25A42-201ENST00000318596 3120 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
SHKBP1Q8TBC3 FNDC3B-204ENST00000421757 946 ntTSL 1 (best) BASIC22.86■■□□□ 1.25
SHKBP1Q8TBC3 ARHGAP24-206ENST00000503995 1273 ntTSL 1 (best) BASIC22.86■■□□□ 1.25
SHKBP1Q8TBC3 PRSS56-201ENST00000449534 2157 ntAPPRIS ALT2 TSL 5 BASIC22.86■■□□□ 1.25
SHKBP1Q8TBC3 HOXA10-206ENST00000613671 2175 ntTSL 5 BASIC22.86■■□□□ 1.25
SHKBP1Q8TBC3 PRSS56-203ENST00000617714 2158 ntAPPRIS P2 TSL 5 BASIC22.86■■□□□ 1.25
SHKBP1Q8TBC3 CTSF-201ENST00000310325 2035 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
SHKBP1Q8TBC3 PCYT2-203ENST00000538936 5147 ntTSL 1 (best) BASIC22.85■■□□□ 1.25
SHKBP1Q8TBC3 PHACTR2-208ENST00000440869 2569 ntAPPRIS ALT2 TSL 2 BASIC22.85■■□□□ 1.25
SHKBP1Q8TBC3 COX20-201ENST00000366528 568 ntTSL 2 BASIC22.85■■□□□ 1.25
SHKBP1Q8TBC3 AC099681.3-201ENST00000421500 939 ntTSL 4 BASIC22.85■■□□□ 1.25
SHKBP1Q8TBC3 FGF12-AS2-201ENST00000443165 580 ntTSL 4 BASIC22.85■■□□□ 1.25
SHKBP1Q8TBC3 AC092468.1-201ENST00000491321 562 ntTSL 4 BASIC22.85■■□□□ 1.25
SHKBP1Q8TBC3 HRH3-202ENST00000340177 2659 ntAPPRIS P2 TSL 1 (best) BASIC22.85■■□□□ 1.25
SHKBP1Q8TBC3 STX4-201ENST00000313843 1481 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
SHKBP1Q8TBC3 AP004607.4-201ENST00000530158 1459 ntBASIC22.85■■□□□ 1.25
SHKBP1Q8TBC3 PPP2R2C-203ENST00000382599 1807 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
SHKBP1Q8TBC3 DONSON-201ENST00000303071 2170 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
SHKBP1Q8TBC3 AC004854.2-201ENST00000608450 1441 ntBASIC22.84■■□□□ 1.25
SHKBP1Q8TBC3 ZBTB22-208ENST00000431845 2651 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
SHKBP1Q8TBC3 TUBG1-201ENST00000251413 1611 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
SHKBP1Q8TBC3 RAMP2-201ENST00000253796 780 ntAPPRIS P2 TSL 1 (best) BASIC22.84■■□□□ 1.25
SHKBP1Q8TBC3 AC006015.1-201ENST00000429970 570 ntBASIC22.84■■□□□ 1.25
SHKBP1Q8TBC3 TUSC3-209ENST00000509380 1266 ntTSL 5 BASIC22.84■■□□□ 1.25
SHKBP1Q8TBC3 ADARB2-202ENST00000381310 1810 ntTSL 1 (best) BASIC22.84■■□□□ 1.25
SHKBP1Q8TBC3 ST8SIA6-201ENST00000377602 2276 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
SHKBP1Q8TBC3 SEPT4-205ENST00000426861 1906 ntTSL 1 (best) BASIC22.84■■□□□ 1.25
SHKBP1Q8TBC3 SLC30A2-201ENST00000374276 2494 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
Retrieved 100 of 98,524 protein–RNA pairs in 26.7 ms