Protein–RNA interactions for Protein: Q8NFR3

SPTSSB, Serine palmitoyltransferase small subunit B, humanhuman

Predictions only

Length 76 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPTSSBQ8NFR3 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC11.99□□□□□ -0.49
SPTSSBQ8NFR3 TMEM198-202ENST00000373883 2218 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
SPTSSBQ8NFR3 SMG7-AS1-201ENST00000421703 2220 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
SPTSSBQ8NFR3 P4HA2-202ENST00000360568 2313 ntAPPRIS ALT1 TSL 1 (best) BASIC11.99□□□□□ -0.49
SPTSSBQ8NFR3 EEF1D-204ENST00000423316 2378 ntAPPRIS P4 TSL 5 BASIC11.99□□□□□ -0.49
SPTSSBQ8NFR3 ESR2-204ENST00000353772 2454 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
SPTSSBQ8NFR3 KCNA3-201ENST00000369769 2569 ntAPPRIS P1 BASIC11.99□□□□□ -0.49
SPTSSBQ8NFR3 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
SPTSSBQ8NFR3 MDGA2-202ENST00000399232 5075 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
SPTSSBQ8NFR3 PODN-203ENST00000395871 2744 ntTSL 5 BASIC11.98□□□□□ -0.49
SPTSSBQ8NFR3 FOXJ1-201ENST00000322957 2641 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
SPTSSBQ8NFR3 LARGE2-202ENST00000401752 2516 ntAPPRIS P3 TSL 1 (best) BASIC11.98□□□□□ -0.49
SPTSSBQ8NFR3 ADORA2A-214ENST00000611543 2412 ntAPPRIS P1 TSL 5 BASIC11.98□□□□□ -0.49
SPTSSBQ8NFR3 SARM1-208ENST00000585482 10309 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
SPTSSBQ8NFR3 SETD1B-201ENST00000267197 5772 ntAPPRIS ALT2 TSL 5 BASIC11.98□□□□□ -0.49
SPTSSBQ8NFR3 AHRR-201ENST00000316418 5661 ntAPPRIS P3 TSL 1 (best) BASIC11.98□□□□□ -0.49
SPTSSBQ8NFR3 CHPT1-201ENST00000229266 1585 ntAPPRIS P2 TSL 1 (best) BASIC11.98□□□□□ -0.49
SPTSSBQ8NFR3 DUSP14-206ENST00000617516 1537 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
SPTSSBQ8NFR3 GNPTAB-202ENST00000392919 760 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
SPTSSBQ8NFR3 LEMD2-214ENST00000614475 2883 ntAPPRIS P1 TSL 5 BASIC11.98□□□□□ -0.49
SPTSSBQ8NFR3 PPFIA3-201ENST00000334186 4733 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
SPTSSBQ8NFR3 WIPI2-201ENST00000288828 4476 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
SPTSSBQ8NFR3 TSC2-204ENST00000401874 5421 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
SPTSSBQ8NFR3 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC11.98□□□□□ -0.49
SPTSSBQ8NFR3 EXT1-201ENST00000378204 8270 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
SPTSSBQ8NFR3 GRK4-201ENST00000345167 2013 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
SPTSSBQ8NFR3 BCS1L-210ENST00000431802 2015 ntAPPRIS P1 TSL 2 BASIC11.98□□□□□ -0.49
SPTSSBQ8NFR3 RFFL-206ENST00000447669 2030 ntAPPRIS P1 TSL 5 BASIC11.98□□□□□ -0.49
SPTSSBQ8NFR3 NR2F1-AS1-214ENST00000607831 1963 ntTSL 2 BASIC11.98□□□□□ -0.49
SPTSSBQ8NFR3 MFSD5-201ENST00000329548 1760 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
SPTSSBQ8NFR3 EPM2A-208ENST00000618445 1694 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
SPTSSBQ8NFR3 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
SPTSSBQ8NFR3 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
SPTSSBQ8NFR3 DENND2A-201ENST00000275884 3735 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
SPTSSBQ8NFR3 CHRNB1-201ENST00000306071 2557 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
SPTSSBQ8NFR3 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC11.97□□□□□ -0.49
SPTSSBQ8NFR3 FAM83G-202ENST00000388995 5266 ntAPPRIS P1 TSL 5 BASIC11.97□□□□□ -0.49
SPTSSBQ8NFR3 ASB6-201ENST00000277458 2330 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
SPTSSBQ8NFR3 FOLH1-203ENST00000343844 2258 ntTSL 2 BASIC11.97□□□□□ -0.49
SPTSSBQ8NFR3 KLC1-227ENST00000634686 2229 ntTSL 5 BASIC11.97□□□□□ -0.49
SPTSSBQ8NFR3 LENG8-208ENST00000610347 5789 ntAPPRIS ALT2 TSL 5 BASIC11.97□□□□□ -0.49
SPTSSBQ8NFR3 PRR14-202ENST00000300835 2198 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
SPTSSBQ8NFR3 KRT10-201ENST00000269576 2124 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
SPTSSBQ8NFR3 ZNF213-202ENST00000416391 2996 ntAPPRIS P1 TSL 5 BASIC11.97□□□□□ -0.49
SPTSSBQ8NFR3 AC025431.1-201ENST00000559684 874 ntTSL 3 BASIC11.97□□□□□ -0.49
SPTSSBQ8NFR3 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
SPTSSBQ8NFR3 MROH6-210ENST00000533679 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
SPTSSBQ8NFR3 SAE1-209ENST00000598840 1831 ntTSL 5 BASIC11.97□□□□□ -0.49
SPTSSBQ8NFR3 REEP6-201ENST00000233596 1794 ntAPPRIS P2 TSL 1 (best) BASIC11.97□□□□□ -0.49
SPTSSBQ8NFR3 PHRF1-202ENST00000413872 5224 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
SPTSSBQ8NFR3 ARHGEF35-201ENST00000378115 2431 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
SPTSSBQ8NFR3 PLXND1-201ENST00000324093 7094 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
SPTSSBQ8NFR3 PACS1-201ENST00000320580 4392 ntAPPRIS P2 TSL 1 (best) BASIC11.97□□□□□ -0.49
SPTSSBQ8NFR3 PHF2-202ENST00000375376 3045 ntTSL 5 BASIC11.97□□□□□ -0.49
SPTSSBQ8NFR3 THEM6-201ENST00000336138 2259 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
SPTSSBQ8NFR3 SLC35F5-203ENST00000409342 2284 ntTSL 2 BASIC11.97□□□□□ -0.49
SPTSSBQ8NFR3 S1PR5-202ENST00000439028 2191 ntAPPRIS P1 TSL 2 BASIC11.96□□□□□ -0.49
SPTSSBQ8NFR3 SLC35F3-201ENST00000366617 2762 ntAPPRIS ALT1 TSL 1 (best) BASIC11.96□□□□□ -0.49
SPTSSBQ8NFR3 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC11.96□□□□□ -0.49
SPTSSBQ8NFR3 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC11.96□□□□□ -0.49
SPTSSBQ8NFR3 NACC2-201ENST00000277554 6899 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
SPTSSBQ8NFR3 IL12RB2-201ENST00000262345 4040 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
SPTSSBQ8NFR3 RIMS1-210ENST00000491071 5047 ntTSL 5 BASIC11.96□□□□□ -0.49
SPTSSBQ8NFR3 AC026310.3-201ENST00000625186 2373 ntBASIC11.96□□□□□ -0.49
SPTSSBQ8NFR3 AMH-201ENST00000221496 1821 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
SPTSSBQ8NFR3 IQANK1-201ENST00000527139 1803 ntAPPRIS P1 TSL 5 BASIC11.96□□□□□ -0.49
SPTSSBQ8NFR3 MBNL1-201ENST00000282486 6422 ntAPPRIS P4 TSL 5 BASIC11.96□□□□□ -0.49
SPTSSBQ8NFR3 CCNYL1-205ENST00000420822 952 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
SPTSSBQ8NFR3 AL133380.1-201ENST00000506013 324 ntBASIC11.96□□□□□ -0.49
SPTSSBQ8NFR3 AP001107.7-201ENST00000533287 272 ntTSL 2 BASIC11.96□□□□□ -0.49
SPTSSBQ8NFR3 PLCH2-203ENST00000378486 4837 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
SPTSSBQ8NFR3 PLCH2-204ENST00000419816 4837 ntAPPRIS P1 TSL 5 BASIC11.96□□□□□ -0.49
SPTSSBQ8NFR3 E2F5-202ENST00000416274 1728 ntAPPRIS P4 TSL 1 (best) BASIC11.96□□□□□ -0.49
SPTSSBQ8NFR3 PRSS56-201ENST00000449534 2157 ntAPPRIS ALT2 TSL 5 BASIC11.96□□□□□ -0.5
SPTSSBQ8NFR3 PRSS56-203ENST00000617714 2158 ntAPPRIS P2 TSL 5 BASIC11.96□□□□□ -0.5
SPTSSBQ8NFR3 DUOX1-202ENST00000389037 5483 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
SPTSSBQ8NFR3 PHF7-201ENST00000327906 2130 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
SPTSSBQ8NFR3 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
SPTSSBQ8NFR3 PSMG3-AS1-201ENST00000437621 5701 ntTSL 1 (best) BASIC11.96□□□□□ -0.5
SPTSSBQ8NFR3 KIAA1217-206ENST00000376462 6123 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.5
SPTSSBQ8NFR3 PTPRU-202ENST00000373779 5579 ntTSL 1 (best) BASIC11.96□□□□□ -0.5
SPTSSBQ8NFR3 AC138696.1-201ENST00000522452 2897 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
SPTSSBQ8NFR3 ADAD2-202ENST00000315906 1995 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.5
SPTSSBQ8NFR3 LGI3-201ENST00000306317 3272 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
SPTSSBQ8NFR3 TMEM150A-202ENST00000334462 1518 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
SPTSSBQ8NFR3 KAZN-207ENST00000503743 1475 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
SPTSSBQ8NFR3 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
SPTSSBQ8NFR3 PTOV1-201ENST00000391842 1875 ntAPPRIS P1 TSL 5 BASIC11.95□□□□□ -0.5
SPTSSBQ8NFR3 INPP5A-202ENST00000368593 1432 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
SPTSSBQ8NFR3 FNTA-201ENST00000302279 1840 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
SPTSSBQ8NFR3 RB1CC1-201ENST00000025008 6635 ntAPPRIS P3 TSL 1 (best) BASIC11.95□□□□□ -0.5
SPTSSBQ8NFR3 ZNF707-201ENST00000358656 2183 ntAPPRIS P1 TSL 2 BASIC11.95□□□□□ -0.5
SPTSSBQ8NFR3 NFATC4-202ENST00000413692 5700 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
SPTSSBQ8NFR3 CHST13-201ENST00000319340 1789 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
SPTSSBQ8NFR3 FBXL6-201ENST00000331890 1785 ntAPPRIS P3 TSL 1 (best) BASIC11.95□□□□□ -0.5
SPTSSBQ8NFR3 TSC2-207ENST00000439673 5287 ntAPPRIS ALT2 TSL 2 BASIC11.95□□□□□ -0.5
SPTSSBQ8NFR3 THRA-203ENST00000450525 4895 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
SPTSSBQ8NFR3 CABP7-201ENST00000216144 3259 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
SPTSSBQ8NFR3 SLC35B2-204ENST00000537814 1715 ntTSL 2 BASIC11.95□□□□□ -0.5
SPTSSBQ8NFR3 TAOK2-203ENST00000416441 4780 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Retrieved 100 of 98,524 protein–RNA pairs in 44.3 ms