Protein–RNA interactions for Protein: Q8NFH3

NUP43, Nucleoporin Nup43, humanhuman

Predictions only

Length 380 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP43Q8NFH3 FAM72D-201ENST00000400889 2397 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
NUP43Q8NFH3 POTED-202ENST00000620442 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
NUP43Q8NFH3 C2CD4B-201ENST00000380392 1579 ntAPPRIS P1 TSL 2 BASIC20.37■□□□□ 0.85
NUP43Q8NFH3 EI24-211ENST00000534546 1544 ntTSL 2 BASIC20.37■□□□□ 0.85
NUP43Q8NFH3 HTATIP2-204ENST00000451739 1748 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
NUP43Q8NFH3 ENKD1-206ENST00000602644 1353 ntTSL 5 BASIC20.36■□□□□ 0.85
NUP43Q8NFH3 KPTN-201ENST00000338134 1691 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
NUP43Q8NFH3 SMOX-212ENST00000621355 2322 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
NUP43Q8NFH3 FAM102B-201ENST00000370035 5600 ntAPPRIS P2 TSL 1 (best) BASIC20.36■□□□□ 0.85
NUP43Q8NFH3 AC092490.1-203ENST00000514568 1972 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
NUP43Q8NFH3 USP45-205ENST00000472914 1617 ntTSL 5 BASIC20.36■□□□□ 0.85
NUP43Q8NFH3 PYCARD-202ENST00000350605 696 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
NUP43Q8NFH3 MAST4-205ENST00000406039 717 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
NUP43Q8NFH3 LINC01632-201ENST00000615763 496 ntTSL 3 BASIC20.36■□□□□ 0.85
NUP43Q8NFH3 KCNQ5-205ENST00000370398 6345 ntAPPRIS P3 TSL 1 (best) BASIC20.36■□□□□ 0.85
NUP43Q8NFH3 DMPK-220ENST00000618091 2503 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
NUP43Q8NFH3 FDFT1-201ENST00000220584 2176 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
NUP43Q8NFH3 TRADD-202ENST00000486556 1833 ntTSL 2 BASIC20.36■□□□□ 0.85
NUP43Q8NFH3 RPL13-202ENST00000393099 2385 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
NUP43Q8NFH3 PLEKHF1-204ENST00000592810 1357 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
NUP43Q8NFH3 DAZAP1-211ENST00000592522 2157 ntAPPRIS ALT1 TSL 5 BASIC20.35■□□□□ 0.85
NUP43Q8NFH3 MIS18A-201ENST00000290130 1575 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
NUP43Q8NFH3 C11orf96-202ENST00000528572 1834 ntBASIC20.35■□□□□ 0.85
NUP43Q8NFH3 REEP5-202ENST00000379638 3326 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
NUP43Q8NFH3 SMIM29-205ENST00000468145 903 ntTSL 2 BASIC20.35■□□□□ 0.85
NUP43Q8NFH3 SMIM29-207ENST00000481533 1053 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
NUP43Q8NFH3 AC007448.3-201ENST00000585193 689 ntTSL 2 BASIC20.35■□□□□ 0.85
NUP43Q8NFH3 AC010525.1-201ENST00000585559 441 ntBASIC20.35■□□□□ 0.85
NUP43Q8NFH3 RPRD1A-207ENST00000588737 1264 ntTSL 2 BASIC20.35■□□□□ 0.85
NUP43Q8NFH3 PLEKHJ1-213ENST00000591099 1092 ntTSL 2 BASIC20.35■□□□□ 0.85
NUP43Q8NFH3 AC011298.3-201ENST00000615796 283 ntBASIC20.35■□□□□ 0.85
NUP43Q8NFH3 AC136469.2-201ENST00000623944 1028 ntBASIC20.35■□□□□ 0.85
NUP43Q8NFH3 AC068587.7-201ENST00000641602 218 ntBASIC20.35■□□□□ 0.85
NUP43Q8NFH3 NEIL1-206ENST00000564784 2019 ntAPPRIS P1 TSL 2 BASIC20.35■□□□□ 0.85
NUP43Q8NFH3 AC073188.6-202ENST00000616616 2281 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
NUP43Q8NFH3 DYRK1B-204ENST00000593685 2724 ntAPPRIS P3 TSL 5 BASIC20.35■□□□□ 0.85
NUP43Q8NFH3 FOXJ1-201ENST00000322957 2641 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
NUP43Q8NFH3 ARRDC1-AS1-201ENST00000371417 1409 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
NUP43Q8NFH3 MYB-221ENST00000527615 2381 ntTSL 5 BASIC20.35■□□□□ 0.85
NUP43Q8NFH3 ANKHD1-205ENST00000394723 2135 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
NUP43Q8NFH3 AC133065.2-201ENST00000573379 2147 ntTSL 2 BASIC20.35■□□□□ 0.85
NUP43Q8NFH3 KLF9-201ENST00000377126 5175 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
NUP43Q8NFH3 SKIDA1-201ENST00000444772 2667 ntAPPRIS ALT2 TSL 5 BASIC20.34■□□□□ 0.85
NUP43Q8NFH3 PYGO2-201ENST00000368456 1306 ntTSL 2 BASIC20.34■□□□□ 0.85
NUP43Q8NFH3 IRX2-202ENST00000382611 2630 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
NUP43Q8NFH3 IMPA2-201ENST00000269159 1534 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
NUP43Q8NFH3 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
NUP43Q8NFH3 SLC41A3-202ENST00000346785 1705 ntTSL 2 BASIC20.34■□□□□ 0.85
NUP43Q8NFH3 HYI-204ENST00000372432 1066 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
NUP43Q8NFH3 NDUFAF8-201ENST00000431388 615 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
NUP43Q8NFH3 RBM38-205ENST00000440234 686 ntTSL 2 BASIC20.34■□□□□ 0.85
NUP43Q8NFH3 ZNF264-206ENST00000600531 774 ntTSL 2 BASIC20.34■□□□□ 0.85
NUP43Q8NFH3 PLEKHA8-208ENST00000622102 2140 ntTSL 5 BASIC20.34■□□□□ 0.85
NUP43Q8NFH3 AC093762.1-201ENST00000641981 837 ntAPPRIS P1 BASIC20.34■□□□□ 0.85
NUP43Q8NFH3 NOXO1-201ENST00000354249 1618 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
NUP43Q8NFH3 BARX2-201ENST00000281437 1813 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
NUP43Q8NFH3 AC091230.1-202ENST00000564823 5356 ntTSL 2 BASIC20.33■□□□□ 0.85
NUP43Q8NFH3 AL359710.1-201ENST00000427039 1544 ntTSL 2 BASIC20.33■□□□□ 0.85
NUP43Q8NFH3 FOXK2-201ENST00000335255 5265 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
NUP43Q8NFH3 MAIP1-201ENST00000295079 1495 ntAPPRIS P2 TSL 2 BASIC20.33■□□□□ 0.85
NUP43Q8NFH3 UBE2E2-203ENST00000425792 1248 ntAPPRIS P1 TSL 2 BASIC20.33■□□□□ 0.85
NUP43Q8NFH3 CDKN2A-208ENST00000498124 880 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
NUP43Q8NFH3 AC004707.1-201ENST00000511627 715 ntTSL 3 BASIC20.33■□□□□ 0.85
NUP43Q8NFH3 MIR222HG-202ENST00000602507 1758 ntTSL 5 BASIC20.33■□□□□ 0.84
NUP43Q8NFH3 KCNQ5-213ENST00000629977 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.84
NUP43Q8NFH3 INPP1-201ENST00000322522 1919 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
NUP43Q8NFH3 PLPP7-202ENST00000372264 2095 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
NUP43Q8NFH3 AC008406.3-201ENST00000620001 1374 ntBASIC20.33■□□□□ 0.84
NUP43Q8NFH3 WDR86-207ENST00000621812 1542 ntTSL 5 BASIC20.32■□□□□ 0.84
NUP43Q8NFH3 KHDRBS2-201ENST00000281156 2332 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
NUP43Q8NFH3 ANKRD44-204ENST00000409919 1622 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
NUP43Q8NFH3 IQCJ-SCHIP1-203ENST00000476809 1780 ntAPPRIS ALT2 TSL 5 BASIC20.32■□□□□ 0.84
NUP43Q8NFH3 DCTPP1-201ENST00000319285 1222 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
NUP43Q8NFH3 SAP25-203ENST00000614631 987 ntAPPRIS P2 TSL 2 BASIC20.32■□□□□ 0.84
NUP43Q8NFH3 BRWD1-202ENST00000341322 2495 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
NUP43Q8NFH3 PSKH1-202ENST00000570631 1509 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
NUP43Q8NFH3 PLPP5-203ENST00000424479 2130 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
NUP43Q8NFH3 P4HA3-202ENST00000427714 2248 ntTSL 2 BASIC20.31■□□□□ 0.84
NUP43Q8NFH3 PPT2-244ENST00000324816 2053 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
NUP43Q8NFH3 ADCK2-203ENST00000476491 2092 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
NUP43Q8NFH3 FAM120B-204ENST00000625626 1794 ntAPPRIS ALT2 TSL 2 BASIC20.31■□□□□ 0.84
NUP43Q8NFH3 ACP4-201ENST00000270593 1347 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
NUP43Q8NFH3 CACYBP-201ENST00000367679 2766 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
NUP43Q8NFH3 NELFCD-213ENST00000602795 2305 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
NUP43Q8NFH3 ZSWIM7-201ENST00000399277 2008 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
NUP43Q8NFH3 DUX4-203ENST00000565211 1710 ntAPPRIS P2 TSL 1 (best) BASIC20.31■□□□□ 0.84
NUP43Q8NFH3 GOLGA6L9-202ENST00000618348 1710 ntAPPRIS P1 TSL 5 BASIC20.31■□□□□ 0.84
NUP43Q8NFH3 TMEM151B-202ENST00000451188 4895 ntAPPRIS P2 TSL 5 BASIC20.31■□□□□ 0.84
NUP43Q8NFH3 CIDEB-201ENST00000258807 2294 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
NUP43Q8NFH3 UNC93B3-201ENST00000308076 687 ntBASIC20.31■□□□□ 0.84
NUP43Q8NFH3 C19orf60-201ENST00000358607 839 ntAPPRIS P3 TSL 1 (best) BASIC20.31■□□□□ 0.84
NUP43Q8NFH3 STOX1-202ENST00000399162 935 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
NUP43Q8NFH3 STOX1-203ENST00000399165 1135 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
NUP43Q8NFH3 KDELR3-202ENST00000409006 931 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
NUP43Q8NFH3 NKX2-5-202ENST00000424406 1124 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
NUP43Q8NFH3 C19orf60-202ENST00000450195 702 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
NUP43Q8NFH3 AC079089.2-201ENST00000531211 1277 ntBASIC20.31■□□□□ 0.84
NUP43Q8NFH3 TGFBR3L-202ENST00000565886 1260 ntAPPRIS P1 TSL 5 BASIC20.31■□□□□ 0.84
NUP43Q8NFH3 AQP6-201ENST00000315520 1398 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
NUP43Q8NFH3 P2RX5-201ENST00000225328 2309 ntAPPRIS P3 TSL 1 (best) BASIC20.31■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 18.9 ms