Protein–RNA interactions for Protein: Q8N8F7

LSMEM1, Leucine-rich single-pass membrane protein 1, humanhuman

Predictions only

Length 131 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSMEM1Q8N8F7 PRKAR1B-211ENST00000537384 2533 ntAPPRIS P1 TSL 5 BASIC19.92■□□□□ 0.78
LSMEM1Q8N8F7 PLPP5-203ENST00000424479 2130 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
LSMEM1Q8N8F7 SSUH2-217ENST00000544814 1636 ntAPPRIS ALT2 TSL 2 BASIC19.91■□□□□ 0.78
LSMEM1Q8N8F7 CADPS-203ENST00000383710 5471 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
LSMEM1Q8N8F7 MYB-221ENST00000527615 2381 ntTSL 5 BASIC19.91■□□□□ 0.78
LSMEM1Q8N8F7 DPP10-AS1-201ENST00000432658 730 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
LSMEM1Q8N8F7 WDR86-AS1-204ENST00000489632 751 ntTSL 3 BASIC19.91■□□□□ 0.78
LSMEM1Q8N8F7 SLC12A5-AS1-202ENST00000535913 1957 ntTSL 2 BASIC19.91■□□□□ 0.78
LSMEM1Q8N8F7 ZSWIM7-201ENST00000399277 2008 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
LSMEM1Q8N8F7 STX4-202ENST00000394998 1498 ntTSL 2 BASIC19.91■□□□□ 0.78
LSMEM1Q8N8F7 DBP-201ENST00000222122 2229 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
LSMEM1Q8N8F7 HOMER1-202ENST00000334082 5881 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
LSMEM1Q8N8F7 TMEM268-202ENST00000374049 4578 ntAPPRIS ALT1 TSL 5 BASIC19.9■□□□□ 0.78
LSMEM1Q8N8F7 TOP1MT-201ENST00000329245 1958 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
LSMEM1Q8N8F7 AC080112.2-201ENST00000578774 2094 ntTSL 4 BASIC19.9■□□□□ 0.78
LSMEM1Q8N8F7 AC133065.2-201ENST00000573379 2147 ntTSL 2 BASIC19.9■□□□□ 0.78
LSMEM1Q8N8F7 IRX4-201ENST00000231357 2221 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
LSMEM1Q8N8F7 SMOX-212ENST00000621355 2322 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
LSMEM1Q8N8F7 HSD17B14-201ENST00000263278 1238 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
LSMEM1Q8N8F7 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
LSMEM1Q8N8F7 CARD19-201ENST00000375464 855 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
LSMEM1Q8N8F7 AC084116.4-201ENST00000524320 484 ntTSL 2 BASIC19.9■□□□□ 0.78
LSMEM1Q8N8F7 AC091982.4-201ENST00000623943 726 ntTSL 2 BASIC19.9■□□□□ 0.78
LSMEM1Q8N8F7 GRAMD1B-217ENST00000640939 1212 ntTSL 5 BASIC19.9■□□□□ 0.78
LSMEM1Q8N8F7 AQP6-201ENST00000315520 1398 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
LSMEM1Q8N8F7 HAUS7-202ENST00000370211 1363 ntAPPRIS P2 TSL 1 (best) BASIC19.9■□□□□ 0.78
LSMEM1Q8N8F7 DPP10-203ENST00000393147 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
LSMEM1Q8N8F7 STAP2-206ENST00000600324 1508 ntAPPRIS P3 TSL 2 BASIC19.9■□□□□ 0.78
LSMEM1Q8N8F7 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC19.9■□□□□ 0.78
LSMEM1Q8N8F7 ACVRL1-201ENST00000388922 1971 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
LSMEM1Q8N8F7 SOAT2-201ENST00000301466 2044 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
LSMEM1Q8N8F7 PLPP7-202ENST00000372264 2095 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
LSMEM1Q8N8F7 ZNF843-201ENST00000315678 2137 ntAPPRIS P2 TSL 2 BASIC19.9■□□□□ 0.78
LSMEM1Q8N8F7 MPST-202ENST00000397225 2116 ntAPPRIS P1 TSL 2 BASIC19.9■□□□□ 0.78
LSMEM1Q8N8F7 FARP2-223ENST00000627550 2122 ntTSL 2 BASIC19.9■□□□□ 0.78
LSMEM1Q8N8F7 MRGPRF-203ENST00000441623 2282 ntAPPRIS P1 TSL 2 BASIC19.9■□□□□ 0.78
LSMEM1Q8N8F7 KHDRBS2-201ENST00000281156 2332 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
LSMEM1Q8N8F7 INPP1-201ENST00000322522 1919 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
LSMEM1Q8N8F7 OAZ2-201ENST00000326005 1934 ntAPPRIS P1 TSL 5 BASIC19.89■□□□□ 0.77
LSMEM1Q8N8F7 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
LSMEM1Q8N8F7 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
LSMEM1Q8N8F7 DCTD-201ENST00000357067 1931 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
LSMEM1Q8N8F7 CRTC2-203ENST00000368633 2644 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
LSMEM1Q8N8F7 SUMF1-202ENST00000383843 1447 ntTSL 2 BASIC19.89■□□□□ 0.77
LSMEM1Q8N8F7 ANKHD1-205ENST00000394723 2135 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
LSMEM1Q8N8F7 HDHD5-203ENST00000399852 1118 ntTSL 3 BASIC19.89■□□□□ 0.77
LSMEM1Q8N8F7 OR2I1P-207ENST00000453522 948 ntBASIC19.89■□□□□ 0.77
LSMEM1Q8N8F7 FAM167A-204ENST00000528897 1620 ntAPPRIS P1 TSL 2 BASIC19.89■□□□□ 0.77
LSMEM1Q8N8F7 NIPA2-205ENST00000539711 1412 ntTSL 2 BASIC19.89■□□□□ 0.77
LSMEM1Q8N8F7 HOXA11-AS1_1.1-201ENST00000613939 98 ntBASIC19.89■□□□□ 0.77
LSMEM1Q8N8F7 ORAI1-202ENST00000617316 2138 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
LSMEM1Q8N8F7 SHISA9-205ENST00000639941 1135 ntAPPRIS ALT2 TSL 5 BASIC19.89■□□□□ 0.77
LSMEM1Q8N8F7 CSNK1G2-201ENST00000255641 2918 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
LSMEM1Q8N8F7 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC19.89■□□□□ 0.77
LSMEM1Q8N8F7 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
LSMEM1Q8N8F7 CCNG2-204ENST00000502280 1459 ntAPPRIS P1 TSL 2 BASIC19.88■□□□□ 0.77
LSMEM1Q8N8F7 PEMT-201ENST00000255389 1013 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
LSMEM1Q8N8F7 C2orf82-201ENST00000331342 465 ntAPPRIS P2 TSL 1 (best) BASIC19.88■□□□□ 0.77
LSMEM1Q8N8F7 DUX4L19-201ENST00000557448 1267 ntBASIC19.88■□□□□ 0.77
LSMEM1Q8N8F7 MIR4466-201ENST00000606121 54 ntBASIC19.88■□□□□ 0.77
LSMEM1Q8N8F7 AL138724.1-201ENST00000606771 1088 ntBASIC19.88■□□□□ 0.77
LSMEM1Q8N8F7 AC068587.7-201ENST00000641602 218 ntBASIC19.88■□□□□ 0.77
LSMEM1Q8N8F7 ALDH16A1-202ENST00000455361 2470 ntTSL 2 BASIC19.88■□□□□ 0.77
LSMEM1Q8N8F7 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
LSMEM1Q8N8F7 PPP3CC-202ENST00000289963 2135 ntAPPRIS ALT1 TSL 1 (best) BASIC19.88■□□□□ 0.77
LSMEM1Q8N8F7 NOX4-209ENST00000527626 1774 ntTSL 2 BASIC19.88■□□□□ 0.77
LSMEM1Q8N8F7 USP45-205ENST00000472914 1617 ntTSL 5 BASIC19.87■□□□□ 0.77
LSMEM1Q8N8F7 SNX21-212ENST00000491381 1607 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
LSMEM1Q8N8F7 DPP7-201ENST00000371579 1590 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
LSMEM1Q8N8F7 TDRKH-205ENST00000368827 2318 ntAPPRIS P2 TSL 1 (best) BASIC19.87■□□□□ 0.77
LSMEM1Q8N8F7 SNUPN-201ENST00000308588 1513 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
LSMEM1Q8N8F7 AL359710.1-201ENST00000427039 1544 ntTSL 2 BASIC19.87■□□□□ 0.77
LSMEM1Q8N8F7 DENND5A-201ENST00000328194 5031 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
LSMEM1Q8N8F7 DYRK1B-204ENST00000593685 2724 ntAPPRIS P3 TSL 5 BASIC19.87■□□□□ 0.77
LSMEM1Q8N8F7 TRIM54-202ENST00000380075 1967 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
LSMEM1Q8N8F7 U2AF1-202ENST00000380276 940 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
LSMEM1Q8N8F7 UBE2E2-203ENST00000425792 1248 ntAPPRIS P1 TSL 2 BASIC19.87■□□□□ 0.77
LSMEM1Q8N8F7 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC19.87■□□□□ 0.77
LSMEM1Q8N8F7 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC19.87■□□□□ 0.77
LSMEM1Q8N8F7 TCEA1-214ENST00000640382 1234 ntTSL 5 BASIC19.87■□□□□ 0.77
LSMEM1Q8N8F7 ST3GAL4-215ENST00000532243 1825 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
LSMEM1Q8N8F7 SMG7-AS1-201ENST00000421703 2220 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
LSMEM1Q8N8F7 FHL3-201ENST00000373016 1647 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
LSMEM1Q8N8F7 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
LSMEM1Q8N8F7 DMPK-220ENST00000618091 2503 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
LSMEM1Q8N8F7 DNAJC25-201ENST00000313525 2268 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
LSMEM1Q8N8F7 ILDR2-205ENST00000526687 2299 ntTSL 5 BASIC19.86■□□□□ 0.77
LSMEM1Q8N8F7 MAGIX-207ENST00000615915 1757 ntAPPRIS ALT2 TSL 2 BASIC19.86■□□□□ 0.77
LSMEM1Q8N8F7 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC19.86■□□□□ 0.77
LSMEM1Q8N8F7 TMEM200B-201ENST00000420504 2553 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
LSMEM1Q8N8F7 TNFRSF6B-201ENST00000369996 1124 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
LSMEM1Q8N8F7 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC19.86■□□□□ 0.77
LSMEM1Q8N8F7 ATP6V0E2-204ENST00000464662 513 ntAPPRIS P1 TSL 2 BASIC19.86■□□□□ 0.77
LSMEM1Q8N8F7 VAMP2-204ENST00000488857 874 ntAPPRIS ALT1 TSL 3 BASIC19.86■□□□□ 0.77
LSMEM1Q8N8F7 ERI3-201ENST00000372257 1684 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
LSMEM1Q8N8F7 BRWD1-202ENST00000341322 2495 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
LSMEM1Q8N8F7 WISP2-203ENST00000372868 1600 ntAPPRIS P1 TSL 3 BASIC19.86■□□□□ 0.77
LSMEM1Q8N8F7 NELFCD-213ENST00000602795 2305 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
LSMEM1Q8N8F7 MEIS2-207ENST00000557796 2666 ntTSL 5 BASIC19.86■□□□□ 0.77
LSMEM1Q8N8F7 MXRA8-203ENST00000445648 2001 ntTSL 2 BASIC19.85■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 20.3 ms