Protein–RNA interactions for Protein: Q8N1V8

LINC01561, Uncharacterized protein encoded by LINC01561, humanhuman

Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01561Q8N1V8 NAGPA-202ENST00000381955 2100 ntTSL 5 BASIC14.57□□□□□ -0.08
LINC01561Q8N1V8 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC14.57□□□□□ -0.08
LINC01561Q8N1V8 NUDT18-201ENST00000611621 1497 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
LINC01561Q8N1V8 AMZ2-219ENST00000612294 1498 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
LINC01561Q8N1V8 GCH1-206ENST00000543643 1897 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
LINC01561Q8N1V8 PABPC1L2A-201ENST00000373519 2237 ntAPPRIS P1 BASIC14.57□□□□□ -0.08
LINC01561Q8N1V8 ARPP19-201ENST00000249822 5301 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
LINC01561Q8N1V8 EML2-201ENST00000245925 2264 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
LINC01561Q8N1V8 MANEAL-203ENST00000397631 2327 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
LINC01561Q8N1V8 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC14.57□□□□□ -0.08
LINC01561Q8N1V8 AC009102.2-201ENST00000606772 1639 ntBASIC14.57□□□□□ -0.08
LINC01561Q8N1V8 IGFBP6-201ENST00000301464 1169 ntAPPRIS P2 TSL 1 (best) BASIC14.57□□□□□ -0.08
LINC01561Q8N1V8 CDKN3-202ENST00000335183 893 ntAPPRIS P2 TSL 1 (best) BASIC14.57□□□□□ -0.08
LINC01561Q8N1V8 DSG2-202ENST00000585206 1081 ntTSL 2 BASIC14.57□□□□□ -0.08
LINC01561Q8N1V8 AL499627.2-201ENST00000606283 725 ntBASIC14.57□□□□□ -0.08
LINC01561Q8N1V8 CDKN3-211ENST00000611205 874 ntAPPRIS ALT2 TSL 5 BASIC14.57□□□□□ -0.08
LINC01561Q8N1V8 NKILA-201ENST00000613231 537 ntTSL 4 BASIC14.57□□□□□ -0.08
LINC01561Q8N1V8 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
LINC01561Q8N1V8 IRX4-206ENST00000513692 2391 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
LINC01561Q8N1V8 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
LINC01561Q8N1V8 TMEM121B-201ENST00000331437 4954 ntAPPRIS P3 BASIC14.57□□□□□ -0.08
LINC01561Q8N1V8 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC14.57□□□□□ -0.08
LINC01561Q8N1V8 SPAST-204ENST00000621856 1715 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
LINC01561Q8N1V8 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
LINC01561Q8N1V8 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC14.57□□□□□ -0.08
LINC01561Q8N1V8 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
LINC01561Q8N1V8 CFAP99-206ENST00000616117 1941 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
LINC01561Q8N1V8 SNRK-203ENST00000437827 1995 ntTSL 2 BASIC14.56□□□□□ -0.08
LINC01561Q8N1V8 DCAF4-202ENST00000358377 2024 ntAPPRIS P4 TSL 1 (best) BASIC14.56□□□□□ -0.08
LINC01561Q8N1V8 DMPK-220ENST00000618091 2503 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
LINC01561Q8N1V8 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC14.56□□□□□ -0.08
LINC01561Q8N1V8 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC14.56□□□□□ -0.08
LINC01561Q8N1V8 SDHAP1-204ENST00000427415 559 ntTSL 4 BASIC14.56□□□□□ -0.08
LINC01561Q8N1V8 PRELID1-203ENST00000503216 1171 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
LINC01561Q8N1V8 C12orf75-207ENST00000552457 689 ntTSL 5 BASIC14.56□□□□□ -0.08
LINC01561Q8N1V8 LSM7-204ENST00000587502 575 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
LINC01561Q8N1V8 TMEM25-205ENST00000411589 2442 ntAPPRIS ALT2 TSL 2 BASIC14.56□□□□□ -0.08
LINC01561Q8N1V8 NPY4R-201ENST00000374312 1956 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
LINC01561Q8N1V8 NPY4R2-201ENST00000576178 1956 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
LINC01561Q8N1V8 FOSL1-202ENST00000448083 1427 ntTSL 2 BASIC14.56□□□□□ -0.08
LINC01561Q8N1V8 FAM167A-204ENST00000528897 1620 ntAPPRIS P1 TSL 2 BASIC14.55□□□□□ -0.08
LINC01561Q8N1V8 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC14.55□□□□□ -0.08
LINC01561Q8N1V8 SCAND1-202ENST00000373991 1727 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
LINC01561Q8N1V8 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC14.55□□□□□ -0.08
LINC01561Q8N1V8 IL15RA-206ENST00000397248 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
LINC01561Q8N1V8 PFKFB3-216ENST00000625260 1752 ntAPPRIS ALT1 TSL 5 BASIC14.55□□□□□ -0.08
LINC01561Q8N1V8 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC14.55□□□□□ -0.08
LINC01561Q8N1V8 TRIM7-202ENST00000334421 1228 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
LINC01561Q8N1V8 UBE2J2-203ENST00000360466 1047 ntAPPRIS P1 TSL 2 BASIC14.55□□□□□ -0.08
LINC01561Q8N1V8 ILDR2-208ENST00000529387 1238 ntTSL 5 BASIC14.55□□□□□ -0.08
LINC01561Q8N1V8 AL590094.1-201ENST00000635581 706 ntTSL 2 BASIC14.55□□□□□ -0.08
LINC01561Q8N1V8 AP1S1-201ENST00000337619 1306 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
LINC01561Q8N1V8 JMJD1C-AS1-201ENST00000609436 1335 ntBASIC14.55□□□□□ -0.08
LINC01561Q8N1V8 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC14.55□□□□□ -0.08
LINC01561Q8N1V8 RSPO1-201ENST00000356545 2621 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
LINC01561Q8N1V8 VGF-203ENST00000611537 1622 ntTSL 5 BASIC14.55□□□□□ -0.08
LINC01561Q8N1V8 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
LINC01561Q8N1V8 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
LINC01561Q8N1V8 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC14.54□□□□□ -0.08
LINC01561Q8N1V8 UBE2J2-201ENST00000347370 2387 ntTSL 3 BASIC14.54□□□□□ -0.08
LINC01561Q8N1V8 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
LINC01561Q8N1V8 LRIG1-201ENST00000273261 5273 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
LINC01561Q8N1V8 KRTAP5-5-201ENST00000399676 933 ntAPPRIS P1 BASIC14.54□□□□□ -0.08
LINC01561Q8N1V8 EPDR1-202ENST00000423717 638 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
LINC01561Q8N1V8 IGFBP7-203ENST00000514062 1251 ntAPPRIS ALT2 TSL 2 BASIC14.54□□□□□ -0.08
LINC01561Q8N1V8 AC138207.2-201ENST00000583377 492 ntTSL 2 BASIC14.54□□□□□ -0.08
LINC01561Q8N1V8 HOXB7-201ENST00000239165 1371 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
LINC01561Q8N1V8 PFKFB4-202ENST00000383734 1491 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
LINC01561Q8N1V8 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.08
LINC01561Q8N1V8 C17orf82-201ENST00000623772 1530 ntBASIC14.54□□□□□ -0.08
LINC01561Q8N1V8 CCDC106-207ENST00000591578 1592 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
LINC01561Q8N1V8 NISCH-201ENST00000345716 5238 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
LINC01561Q8N1V8 PHLDB2-210ENST00000478922 1861 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
LINC01561Q8N1V8 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
LINC01561Q8N1V8 SH2D5-202ENST00000444387 1934 ntAPPRIS P1 TSL 2 BASIC14.54□□□□□ -0.08
LINC01561Q8N1V8 DISC1-205ENST00000366636 2224 ntAPPRIS P4 TSL 1 (best) BASIC14.54□□□□□ -0.08
LINC01561Q8N1V8 PALM-208ENST00000592155 2272 ntTSL 4 BASIC14.54□□□□□ -0.08
LINC01561Q8N1V8 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC14.53□□□□□ -0.08
LINC01561Q8N1V8 PHACTR3-202ENST00000359926 2252 ntTSL 2 BASIC14.53□□□□□ -0.08
LINC01561Q8N1V8 KCNN4-201ENST00000262888 2240 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
LINC01561Q8N1V8 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
LINC01561Q8N1V8 C1QL4-201ENST00000334221 2071 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
LINC01561Q8N1V8 AC084757.3-201ENST00000558061 1943 ntTSL 3 BASIC14.53□□□□□ -0.08
LINC01561Q8N1V8 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
LINC01561Q8N1V8 NKX2-5-201ENST00000329198 1709 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
LINC01561Q8N1V8 PRSS33-202ENST00000570702 1676 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
LINC01561Q8N1V8 STK19-202ENST00000375333 1557 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
LINC01561Q8N1V8 STAP2-206ENST00000600324 1508 ntAPPRIS P3 TSL 2 BASIC14.53□□□□□ -0.08
LINC01561Q8N1V8 TLX3-201ENST00000296921 1493 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
LINC01561Q8N1V8 AC074143.1-203ENST00000518227 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
LINC01561Q8N1V8 AC026785.2-201ENST00000511821 867 ntTSL 2 BASIC14.53□□□□□ -0.08
LINC01561Q8N1V8 NAA30-202ENST00000554703 795 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
LINC01561Q8N1V8 AC092028.1-203ENST00000608262 953 ntBASIC14.53□□□□□ -0.08
LINC01561Q8N1V8 GADD45A-205ENST00000617962 1142 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
LINC01561Q8N1V8 RASGRP1-201ENST00000310803 5023 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
LINC01561Q8N1V8 RASGRP1-204ENST00000539159 5021 ntAPPRIS ALT1 TSL 5 BASIC14.53□□□□□ -0.08
LINC01561Q8N1V8 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
LINC01561Q8N1V8 EFS-202ENST00000351354 2704 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
LINC01561Q8N1V8 AL137060.1-201ENST00000618151 2648 ntBASIC14.53□□□□□ -0.08
LINC01561Q8N1V8 P2RY2-203ENST00000393597 2107 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 37.6 ms