Protein–RNA interactions for Protein: Q8IYJ1

CPNE9, Copine-9, humanhuman

Predictions only

Length 553 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE9Q8IYJ1 CCDC166-201ENST00000542437 1320 ntAPPRIS P1 TSL 2 BASIC21.52■■□□□ 1.03
CPNE9Q8IYJ1 WDR86-201ENST00000334493 2023 ntAPPRIS P1 TSL 5 BASIC21.51■■□□□ 1.03
CPNE9Q8IYJ1 XBP1-207ENST00000611155 1794 ntTSL 5 BASIC21.51■■□□□ 1.03
CPNE9Q8IYJ1 TDRKH-205ENST00000368827 2318 ntAPPRIS P2 TSL 1 (best) BASIC21.51■■□□□ 1.03
CPNE9Q8IYJ1 AF117829.1-201ENST00000519655 1398 ntTSL 5 BASIC21.51■■□□□ 1.03
CPNE9Q8IYJ1 KAT2B-201ENST00000263754 4833 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
CPNE9Q8IYJ1 SNUPN-201ENST00000308588 1513 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
CPNE9Q8IYJ1 EEFSEC-201ENST00000254730 2232 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
CPNE9Q8IYJ1 ARL13B-205ENST00000471138 2206 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
CPNE9Q8IYJ1 DUX4L19-201ENST00000557448 1267 ntBASIC21.51■■□□□ 1.03
CPNE9Q8IYJ1 NIPA2-203ENST00000398013 2280 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
CPNE9Q8IYJ1 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
CPNE9Q8IYJ1 STX4-202ENST00000394998 1498 ntTSL 2 BASIC21.51■■□□□ 1.03
CPNE9Q8IYJ1 ICAM5-201ENST00000221980 3000 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
CPNE9Q8IYJ1 HIRA-201ENST00000263208 4053 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
CPNE9Q8IYJ1 HTATIP2-204ENST00000451739 1748 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
CPNE9Q8IYJ1 CHADL-201ENST00000216241 2533 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
CPNE9Q8IYJ1 HES6-206ENST00000409574 738 ntTSL 2 BASIC21.5■■□□□ 1.03
CPNE9Q8IYJ1 ACYP1-205ENST00000555463 789 ntTSL 2 BASIC21.5■■□□□ 1.03
CPNE9Q8IYJ1 PLEKHJ1-213ENST00000591099 1092 ntTSL 2 BASIC21.5■■□□□ 1.03
CPNE9Q8IYJ1 CA15P2-201ENST00000611168 834 ntBASIC21.5■■□□□ 1.03
CPNE9Q8IYJ1 AC091982.4-201ENST00000623943 726 ntTSL 2 BASIC21.5■■□□□ 1.03
CPNE9Q8IYJ1 AC093762.1-201ENST00000641981 837 ntAPPRIS P1 BASIC21.5■■□□□ 1.03
CPNE9Q8IYJ1 CERS5-201ENST00000317551 2051 ntAPPRIS P3 TSL 2 BASIC21.5■■□□□ 1.03
CPNE9Q8IYJ1 TMEM165-201ENST00000381334 1928 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
CPNE9Q8IYJ1 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
CPNE9Q8IYJ1 MFSD7-203ENST00000404286 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC21.5■■□□□ 1.03
CPNE9Q8IYJ1 AC092053.2-201ENST00000640557 1818 ntBASIC21.5■■□□□ 1.03
CPNE9Q8IYJ1 SMOX-212ENST00000621355 2322 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
CPNE9Q8IYJ1 UCHL5-201ENST00000367448 1534 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
CPNE9Q8IYJ1 GPR6-202ENST00000414000 1945 ntTSL 2 BASIC21.49■■□□□ 1.03
CPNE9Q8IYJ1 PLK5-202ENST00000454744 1930 ntAPPRIS P2 TSL 2 BASIC21.49■■□□□ 1.03
CPNE9Q8IYJ1 TRH-201ENST00000302649 1978 ntAPPRIS P2 TSL 1 (best) BASIC21.49■■□□□ 1.03
CPNE9Q8IYJ1 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
CPNE9Q8IYJ1 DAZAP1-211ENST00000592522 2157 ntAPPRIS ALT1 TSL 5 BASIC21.49■■□□□ 1.03
CPNE9Q8IYJ1 PYCARD-202ENST00000350605 696 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
CPNE9Q8IYJ1 OR2I1P-207ENST00000453522 948 ntBASIC21.49■■□□□ 1.03
CPNE9Q8IYJ1 AL031602.1-201ENST00000633169 911 ntBASIC21.49■■□□□ 1.03
CPNE9Q8IYJ1 LMLN-210ENST00000482695 2010 ntAPPRIS ALT2 TSL 1 (best) BASIC21.49■■□□□ 1.03
CPNE9Q8IYJ1 CACYBP-201ENST00000367679 2766 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
CPNE9Q8IYJ1 RALGPS1-207ENST00000394022 1672 ntTSL 2 BASIC21.49■■□□□ 1.03
CPNE9Q8IYJ1 NELFCD-213ENST00000602795 2305 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
CPNE9Q8IYJ1 ENKD1-206ENST00000602644 1353 ntTSL 5 BASIC21.48■■□□□ 1.03
CPNE9Q8IYJ1 RBM38-203ENST00000356208 2382 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
CPNE9Q8IYJ1 NOTUM-201ENST00000409678 2329 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
CPNE9Q8IYJ1 TMEM80-201ENST00000397510 1094 ntAPPRIS P2 TSL 5 BASIC21.48■■□□□ 1.03
CPNE9Q8IYJ1 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC21.48■■□□□ 1.03
CPNE9Q8IYJ1 SMIM29-205ENST00000468145 903 ntTSL 2 BASIC21.48■■□□□ 1.03
CPNE9Q8IYJ1 SMIM29-207ENST00000481533 1053 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
CPNE9Q8IYJ1 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
CPNE9Q8IYJ1 AC010525.1-201ENST00000585559 441 ntBASIC21.48■■□□□ 1.03
CPNE9Q8IYJ1 AL138724.1-201ENST00000606771 1088 ntBASIC21.48■■□□□ 1.03
CPNE9Q8IYJ1 ZGPAT-201ENST00000328969 1945 ntTSL 2 BASIC21.48■■□□□ 1.03
CPNE9Q8IYJ1 TBC1D22A-206ENST00000407381 1949 ntTSL 5 BASIC21.48■■□□□ 1.03
CPNE9Q8IYJ1 MYB-221ENST00000527615 2381 ntTSL 5 BASIC21.48■■□□□ 1.03
CPNE9Q8IYJ1 STAP2-206ENST00000600324 1508 ntAPPRIS P3 TSL 2 BASIC21.48■■□□□ 1.03
CPNE9Q8IYJ1 C2CD4B-201ENST00000380392 1579 ntAPPRIS P1 TSL 2 BASIC21.48■■□□□ 1.03
CPNE9Q8IYJ1 PWWP2A-205ENST00000523662 1819 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
CPNE9Q8IYJ1 DPF1-217ENST00000614244 2356 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
CPNE9Q8IYJ1 AC138028.2-201ENST00000440406 1539 ntTSL 2 BASIC21.47■■□□□ 1.03
CPNE9Q8IYJ1 DCTPP1-201ENST00000319285 1222 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
CPNE9Q8IYJ1 MAST4-205ENST00000406039 717 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
CPNE9Q8IYJ1 NKX2-5-202ENST00000424406 1124 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
CPNE9Q8IYJ1 LINC01632-201ENST00000615763 496 ntTSL 3 BASIC21.47■■□□□ 1.03
CPNE9Q8IYJ1 AC080112.2-201ENST00000578774 2094 ntTSL 4 BASIC21.47■■□□□ 1.03
CPNE9Q8IYJ1 AKT1S1-206ENST00000391834 1849 ntAPPRIS P1 TSL 5 BASIC21.47■■□□□ 1.03
CPNE9Q8IYJ1 PYGO2-201ENST00000368456 1306 ntTSL 2 BASIC21.47■■□□□ 1.03
CPNE9Q8IYJ1 TMEM25-205ENST00000411589 2442 ntAPPRIS ALT2 TSL 2 BASIC21.47■■□□□ 1.03
CPNE9Q8IYJ1 ZNF584-203ENST00000593920 2187 ntTSL 2 BASIC21.47■■□□□ 1.03
CPNE9Q8IYJ1 DYRK1B-204ENST00000593685 2724 ntAPPRIS P3 TSL 5 BASIC21.47■■□□□ 1.03
CPNE9Q8IYJ1 BRWD1-202ENST00000341322 2495 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
CPNE9Q8IYJ1 PTP4A3-204ENST00000521578 1717 ntAPPRIS P1 TSL 5 BASIC21.46■■□□□ 1.03
CPNE9Q8IYJ1 KCNQ5-208ENST00000414165 6236 ntTSL 5 BASIC21.46■■□□□ 1.03
CPNE9Q8IYJ1 SLC35A3-204ENST00000427993 2062 ntAPPRIS P1 TSL 5 BASIC21.46■■□□□ 1.03
CPNE9Q8IYJ1 FAM72A-202ENST00000367128 2398 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
CPNE9Q8IYJ1 FAM72D-201ENST00000400889 2397 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
CPNE9Q8IYJ1 EXOSC6-201ENST00000435634 5153 ntAPPRIS P1 BASIC21.46■■□□□ 1.03
CPNE9Q8IYJ1 EI24-211ENST00000534546 1544 ntTSL 2 BASIC21.46■■□□□ 1.03
CPNE9Q8IYJ1 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC21.46■■□□□ 1.03
CPNE9Q8IYJ1 MIS18A-201ENST00000290130 1575 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
CPNE9Q8IYJ1 HSD17B14-201ENST00000263278 1238 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
CPNE9Q8IYJ1 KDELR3-202ENST00000409006 931 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
CPNE9Q8IYJ1 AC084116.4-201ENST00000524320 484 ntTSL 2 BASIC21.46■■□□□ 1.03
CPNE9Q8IYJ1 AC007448.3-201ENST00000585193 689 ntTSL 2 BASIC21.46■■□□□ 1.03
CPNE9Q8IYJ1 SAP25-203ENST00000614631 987 ntAPPRIS P2 TSL 2 BASIC21.46■■□□□ 1.03
CPNE9Q8IYJ1 AC136469.2-201ENST00000623944 1028 ntBASIC21.46■■□□□ 1.03
CPNE9Q8IYJ1 POTED-202ENST00000620442 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC21.46■■□□□ 1.03
CPNE9Q8IYJ1 GPR137B-202ENST00000366592 2042 ntAPPRIS P2 TSL 1 (best) BASIC21.46■■□□□ 1.03
CPNE9Q8IYJ1 ZNF410-206ENST00000540593 1722 ntTSL 2 BASIC21.46■■□□□ 1.03
CPNE9Q8IYJ1 AC133065.2-201ENST00000573379 2147 ntTSL 2 BASIC21.46■■□□□ 1.03
CPNE9Q8IYJ1 PLEKHA8-208ENST00000622102 2140 ntTSL 5 BASIC21.46■■□□□ 1.03
CPNE9Q8IYJ1 CIDEB-201ENST00000258807 2294 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
CPNE9Q8IYJ1 AC073188.6-202ENST00000616616 2281 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
CPNE9Q8IYJ1 PSKH1-202ENST00000570631 1509 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
CPNE9Q8IYJ1 HOMER1-202ENST00000334082 5881 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
CPNE9Q8IYJ1 TOP1MT-201ENST00000329245 1958 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
CPNE9Q8IYJ1 NEIL1-206ENST00000564784 2019 ntAPPRIS P1 TSL 2 BASIC21.45■■□□□ 1.02
CPNE9Q8IYJ1 NOXO1-201ENST00000354249 1618 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
CPNE9Q8IYJ1 HYI-204ENST00000372432 1066 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
CPNE9Q8IYJ1 RPRD1A-207ENST00000588737 1264 ntTSL 2 BASIC21.45■■□□□ 1.02
Retrieved 100 of 98,524 protein–RNA pairs in 39.9 ms