Protein–RNA interactions for Protein: Q8IXQ3

C9orf40, Uncharacterized protein C9orf40, humanhuman

Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf40Q8IXQ3 ITGA9-AS1-210ENST00000457661 738 ntTSL 4 BASIC20.14■□□□□ 0.81
C9orf40Q8IXQ3 AC079089.2-201ENST00000531211 1277 ntBASIC20.14■□□□□ 0.81
C9orf40Q8IXQ3 TUNAR-203ENST00000554321 767 ntAPPRIS P1 TSL 4 BASIC20.14■□□□□ 0.81
C9orf40Q8IXQ3 STOML2-205ENST00000619795 1293 ntTSL 3 BASIC20.14■□□□□ 0.81
C9orf40Q8IXQ3 DPH7-201ENST00000277540 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
C9orf40Q8IXQ3 AVPR2-201ENST00000337474 1622 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
C9orf40Q8IXQ3 ZNF419-203ENST00000354197 1569 ntTSL 5 BASIC20.13■□□□□ 0.81
C9orf40Q8IXQ3 ASB6-201ENST00000277458 2330 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
C9orf40Q8IXQ3 NME4-201ENST00000219479 995 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
C9orf40Q8IXQ3 RPL8-201ENST00000262584 1041 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
C9orf40Q8IXQ3 NME4-202ENST00000382940 766 ntTSL 3 BASIC20.13■□□□□ 0.81
C9orf40Q8IXQ3 ZFAS1-206ENST00000450535 1075 ntTSL 3 BASIC20.13■□□□□ 0.81
C9orf40Q8IXQ3 AES-207ENST00000586839 942 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
C9orf40Q8IXQ3 SMUG1P1-201ENST00000590640 811 ntBASIC20.13■□□□□ 0.81
C9orf40Q8IXQ3 NME4-211ENST00000620944 1193 ntTSL 2 BASIC20.13■□□□□ 0.81
C9orf40Q8IXQ3 MIR6084-201ENST00000622012 110 ntBASIC20.13■□□□□ 0.81
C9orf40Q8IXQ3 AL358852.1-201ENST00000623174 1268 ntBASIC20.13■□□□□ 0.81
C9orf40Q8IXQ3 ANXA8-204ENST00000583911 1874 ntTSL 2 BASIC20.13■□□□□ 0.81
C9orf40Q8IXQ3 RBMS1-205ENST00000409972 1815 ntTSL 5 BASIC20.13■□□□□ 0.81
C9orf40Q8IXQ3 ATMIN-201ENST00000299575 4884 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
C9orf40Q8IXQ3 MTX2-201ENST00000249442 1364 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
C9orf40Q8IXQ3 GNB2-201ENST00000303210 1878 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
C9orf40Q8IXQ3 GSR-204ENST00000537535 1323 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
C9orf40Q8IXQ3 PRKCZ-AS1-201ENST00000333854 1253 ntTSL 2 BASIC20.12■□□□□ 0.81
C9orf40Q8IXQ3 JARID2-AS1-201ENST00000441978 455 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
C9orf40Q8IXQ3 ZNF696-205ENST00000521537 705 ntTSL 2 BASIC20.12■□□□□ 0.81
C9orf40Q8IXQ3 AL354811.1-201ENST00000610286 706 ntBASIC20.12■□□□□ 0.81
C9orf40Q8IXQ3 GPR143-203ENST00000467482 1762 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
C9orf40Q8IXQ3 H2AFY2-201ENST00000373255 1980 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
C9orf40Q8IXQ3 KLF3-203ENST00000514033 1871 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
C9orf40Q8IXQ3 AP004608.1-202ENST00000533390 1863 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
C9orf40Q8IXQ3 MAPKAPK5-AS1-201ENST00000428207 2290 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
C9orf40Q8IXQ3 AC113189.4-201ENST00000575331 5553 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
C9orf40Q8IXQ3 STX5-201ENST00000294179 1794 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
C9orf40Q8IXQ3 PRODH-203ENST00000357068 2462 ntAPPRIS P3 TSL 1 (best) BASIC20.11■□□□□ 0.81
C9orf40Q8IXQ3 CDIPT-210ENST00000570016 1346 ntAPPRIS P1 TSL 5 BASIC20.11■□□□□ 0.81
C9orf40Q8IXQ3 PRKCQ-AS1-204ENST00000455810 920 ntTSL 2 BASIC20.11■□□□□ 0.81
C9orf40Q8IXQ3 AC116614.1-201ENST00000456949 539 ntTSL 2 BASIC20.11■□□□□ 0.81
C9orf40Q8IXQ3 CTAG1A-201ENST00000593606 993 ntTSL 5 BASIC20.11■□□□□ 0.81
C9orf40Q8IXQ3 LTB4R-201ENST00000345363 1616 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
C9orf40Q8IXQ3 DOK1-203ENST00000409429 1955 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
C9orf40Q8IXQ3 SLCO3A1-201ENST00000318445 5115 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
C9orf40Q8IXQ3 BIN1-209ENST00000393040 2293 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
C9orf40Q8IXQ3 ADAM22-209ENST00000439864 2576 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
C9orf40Q8IXQ3 LINC00526-201ENST00000581067 1875 ntBASIC20.11■□□□□ 0.81
C9orf40Q8IXQ3 PWWP2A-205ENST00000523662 1819 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
C9orf40Q8IXQ3 TBR1-202ENST00000410035 1454 ntTSL 2 BASIC20.11■□□□□ 0.81
C9orf40Q8IXQ3 MAPK8IP1P2-201ENST00000580257 1472 ntBASIC20.11■□□□□ 0.81
C9orf40Q8IXQ3 AC127496.7-201ENST00000625110 1798 ntBASIC20.11■□□□□ 0.81
C9orf40Q8IXQ3 CCDC9-201ENST00000221922 2093 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
C9orf40Q8IXQ3 SIMC1-202ENST00000341199 2056 ntAPPRIS P3 TSL 2 BASIC20.11■□□□□ 0.81
C9orf40Q8IXQ3 AC080112.2-201ENST00000578774 2094 ntTSL 4 BASIC20.11■□□□□ 0.81
C9orf40Q8IXQ3 PLPP5-209ENST00000529359 2185 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
C9orf40Q8IXQ3 KREMEN2-203ENST00000571007 1877 ntTSL 2 BASIC20.1■□□□□ 0.81
C9orf40Q8IXQ3 LTK-203ENST00000453182 2412 ntTSL 2 BASIC20.1■□□□□ 0.81
C9orf40Q8IXQ3 TESC-201ENST00000335209 1041 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
C9orf40Q8IXQ3 FAM222B-213ENST00000583522 556 ntTSL 2 BASIC20.1■□□□□ 0.81
C9orf40Q8IXQ3 AL138963.3-201ENST00000610057 588 ntTSL 4 BASIC20.1■□□□□ 0.81
C9orf40Q8IXQ3 DISC1-223ENST00000628350 2363 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
C9orf40Q8IXQ3 APBB3-204ENST00000358580 2020 ntTSL 5 BASIC20.1■□□□□ 0.81
C9orf40Q8IXQ3 RUNX2-210ENST00000576263 2256 ntTSL 5 BASIC20.1■□□□□ 0.81
C9orf40Q8IXQ3 GPR6-202ENST00000414000 1945 ntTSL 2 BASIC20.1■□□□□ 0.81
C9orf40Q8IXQ3 PSPH-201ENST00000275605 2131 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
C9orf40Q8IXQ3 GRK4-204ENST00000503518 2136 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
C9orf40Q8IXQ3 PTGES2-202ENST00000338961 2331 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
C9orf40Q8IXQ3 AP1S1-201ENST00000337619 1306 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
C9orf40Q8IXQ3 UHRF1BP1L-202ENST00000356828 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
C9orf40Q8IXQ3 CDK5-204ENST00000485972 1758 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
C9orf40Q8IXQ3 TERT-206ENST00000508104 2486 ntTSL 5 BASIC20.09■□□□□ 0.81
C9orf40Q8IXQ3 AL359710.1-201ENST00000427039 1544 ntTSL 2 BASIC20.09■□□□□ 0.81
C9orf40Q8IXQ3 AK1-201ENST00000223836 736 ntTSL 3 BASIC20.09■□□□□ 0.81
C9orf40Q8IXQ3 CCDC28B-201ENST00000373602 1089 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
C9orf40Q8IXQ3 MIR935-201ENST00000401179 91 ntBASIC20.09■□□□□ 0.81
C9orf40Q8IXQ3 NMRAL1-202ENST00000404295 1233 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
C9orf40Q8IXQ3 MFF-208ENST00000409616 1247 ntTSL 5 BASIC20.09■□□□□ 0.81
C9orf40Q8IXQ3 PPM1N-207ENST00000451287 1293 ntAPPRIS P1 TSL 5 BASIC20.09■□□□□ 0.81
C9orf40Q8IXQ3 AL355877.1-204ENST00000451482 1078 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
C9orf40Q8IXQ3 SP2-202ENST00000613139 908 ntTSL 5 BASIC20.09■□□□□ 0.81
C9orf40Q8IXQ3 PPT2-248ENST00000395523 2111 ntAPPRIS ALT2 TSL 5 BASIC20.09■□□□□ 0.81
C9orf40Q8IXQ3 DPEP2-204ENST00000572888 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
C9orf40Q8IXQ3 CAPG-201ENST00000263867 1442 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
C9orf40Q8IXQ3 RASGRP2-207ENST00000377497 2221 ntAPPRIS P2 TSL 1 (best) BASIC20.08■□□□□ 0.81
C9orf40Q8IXQ3 TMEM198B-205ENST00000487582 1581 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
C9orf40Q8IXQ3 AC139530.1-201ENST00000575312 1977 ntBASIC20.08■□□□□ 0.81
C9orf40Q8IXQ3 AC080038.3-201ENST00000623346 1952 ntBASIC20.08■□□□□ 0.81
C9orf40Q8IXQ3 AVPR2-203ENST00000370049 1307 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
C9orf40Q8IXQ3 MPST-204ENST00000404393 1329 ntTSL 5 BASIC20.08■□□□□ 0.81
C9orf40Q8IXQ3 UQCR11-203ENST00000591899 1324 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
C9orf40Q8IXQ3 AC138028.2-201ENST00000440406 1539 ntTSL 2 BASIC20.08■□□□□ 0.81
C9orf40Q8IXQ3 CCKBR-206ENST00000532715 1734 ntTSL 3 BASIC20.08■□□□□ 0.81
C9orf40Q8IXQ3 MSL1-203ENST00000577454 2081 ntTSL 2 BASIC20.08■□□□□ 0.81
C9orf40Q8IXQ3 RNF208-201ENST00000391553 1077 ntAPPRIS P1 BASIC20.08■□□□□ 0.81
C9orf40Q8IXQ3 ORMDL1-202ENST00000392349 1137 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
C9orf40Q8IXQ3 AC027612.3-201ENST00000413684 1047 ntBASIC20.08■□□□□ 0.81
C9orf40Q8IXQ3 PTGDR-202ENST00000553372 1216 ntTSL 3 BASIC20.08■□□□□ 0.81
C9orf40Q8IXQ3 POLR2E-214ENST00000619917 932 ntTSL 5 BASIC20.08■□□□□ 0.81
C9orf40Q8IXQ3 BMP2K-204ENST00000502871 3195 ntAPPRIS P3 TSL 1 (best) BASIC20.08■□□□□ 0.8
C9orf40Q8IXQ3 TMEM259-201ENST00000333175 2581 ntAPPRIS P3 TSL 1 (best) BASIC20.08■□□□□ 0.8
C9orf40Q8IXQ3 MFSD7-209ENST00000515118 1556 ntTSL 5 BASIC20.08■□□□□ 0.8
C9orf40Q8IXQ3 ST7L-201ENST00000343210 1866 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 29.6 ms