Protein–RNA interactions for Protein: Q8IWV7

UBR1, E3 ubiquitin-protein ligase UBR1, humanhuman

Predictions only

Length 1,749 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1Q8IWV7 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC31.49■■■□□ 2.63
UBR1Q8IWV7 JADE2-211ENST00000612830 1251 ntTSL 1 (best) BASIC31.49■■■□□ 2.63
UBR1Q8IWV7 PDIA6-201ENST00000272227 2338 ntAPPRIS P3 TSL 1 (best) BASIC31.49■■■□□ 2.63
UBR1Q8IWV7 SNX24-211ENST00000513881 1563 ntTSL 1 (best) BASIC31.48■■■□□ 2.63
UBR1Q8IWV7 PDLIM3-203ENST00000284771 1672 ntAPPRIS P1 TSL 1 (best) BASIC31.48■■■□□ 2.63
UBR1Q8IWV7 ZNF295-AS1-201ENST00000412906 952 ntTSL 1 (best) BASIC31.48■■■□□ 2.63
UBR1Q8IWV7 SLC7A5P1-201ENST00000568957 537 ntBASIC31.48■■■□□ 2.63
UBR1Q8IWV7 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC31.48■■■□□ 2.63
UBR1Q8IWV7 AKT1S1-203ENST00000391831 2025 ntAPPRIS P1 TSL 2 BASIC31.48■■■□□ 2.63
UBR1Q8IWV7 NKX2-5-201ENST00000329198 1709 ntAPPRIS P1 TSL 1 (best) BASIC31.47■■■□□ 2.63
UBR1Q8IWV7 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC31.47■■■□□ 2.63
UBR1Q8IWV7 SLC2A11-202ENST00000316185 1555 ntTSL 1 (best) BASIC31.47■■■□□ 2.63
UBR1Q8IWV7 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC31.47■■■□□ 2.63
UBR1Q8IWV7 ARL6IP4-205ENST00000412505 818 ntTSL 5 BASIC31.47■■■□□ 2.63
UBR1Q8IWV7 OVCH1-AS1-203ENST00000551108 963 ntTSL 2 BASIC31.47■■■□□ 2.63
UBR1Q8IWV7 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC31.47■■■□□ 2.63
UBR1Q8IWV7 TAZ-205ENST00000475699 1862 ntTSL 1 (best) BASIC31.47■■■□□ 2.63
UBR1Q8IWV7 PRORSD1P-201ENST00000295112 541 ntBASIC31.46■■■□□ 2.63
UBR1Q8IWV7 HBM-201ENST00000356815 506 ntAPPRIS P1 TSL 1 (best) BASIC31.46■■■□□ 2.63
UBR1Q8IWV7 NAA60-204ENST00000421765 1045 ntTSL 2 BASIC31.46■■■□□ 2.63
UBR1Q8IWV7 PRORSD1P-203ENST00000579162 626 ntTSL 5 BASIC31.46■■■□□ 2.63
UBR1Q8IWV7 SRPK3-205ENST00000393786 1900 ntAPPRIS ALT2 TSL 1 (best) BASIC31.46■■■□□ 2.63
UBR1Q8IWV7 ROGDI-201ENST00000322048 1735 ntAPPRIS P1 TSL 1 (best) BASIC31.46■■■□□ 2.63
UBR1Q8IWV7 VDAC1-203ENST00000395047 1873 ntAPPRIS P1 TSL 1 (best) BASIC31.46■■■□□ 2.63
UBR1Q8IWV7 ABCC6P2-202ENST00000542005 706 ntTSL 1 (best) BASIC31.46■■■□□ 2.63
UBR1Q8IWV7 ABCC6-204ENST00000575728 714 ntTSL 1 (best) BASIC31.46■■■□□ 2.63
UBR1Q8IWV7 AC010536.3-201ENST00000620306 533 ntBASIC31.46■■■□□ 2.63
UBR1Q8IWV7 ABHD12B-201ENST00000337334 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC31.46■■■□□ 2.63
UBR1Q8IWV7 AC009237.3-201ENST00000393279 1427 ntBASIC31.45■■■□□ 2.63
UBR1Q8IWV7 RABL6-202ENST00000357466 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC31.45■■■□□ 2.63
UBR1Q8IWV7 BX088645.1-201ENST00000636699 1728 ntAPPRIS P1 TSL 5 BASIC31.45■■■□□ 2.63
UBR1Q8IWV7 KLHDC9-201ENST00000368011 1314 ntAPPRIS P1 TSL 1 (best) BASIC31.45■■■□□ 2.63
UBR1Q8IWV7 OIP5-201ENST00000220514 1236 ntAPPRIS P1 TSL 1 (best) BASIC31.45■■■□□ 2.63
UBR1Q8IWV7 DCTN3-202ENST00000341694 899 ntTSL 1 (best) BASIC31.45■■■□□ 2.63
UBR1Q8IWV7 GUK1-209ENST00000366730 937 ntAPPRIS P3 TSL 3 BASIC31.45■■■□□ 2.63
UBR1Q8IWV7 DCTN3-205ENST00000378916 773 ntTSL 2 BASIC31.45■■■□□ 2.63
UBR1Q8IWV7 AC010141.2-201ENST00000452426 721 ntBASIC31.45■■■□□ 2.63
UBR1Q8IWV7 RNA5SP413-201ENST00000516373 109 ntBASIC31.45■■■□□ 2.63
UBR1Q8IWV7 AC105036.2-201ENST00000569468 176 ntBASIC31.45■■■□□ 2.63
UBR1Q8IWV7 PET100-202ENST00000594797 719 ntAPPRIS P1 TSL 1 (best) BASIC31.45■■■□□ 2.63
UBR1Q8IWV7 SUGCT-209ENST00000628514 1591 ntAPPRIS P4 TSL 1 (best) BASIC31.45■■■□□ 2.62
UBR1Q8IWV7 SIX2-201ENST00000303077 2205 ntAPPRIS P1 TSL 1 (best) BASIC31.45■■■□□ 2.62
UBR1Q8IWV7 MIR222HG-201ENST00000602461 1379 ntTSL 5 BASIC31.45■■■□□ 2.62
UBR1Q8IWV7 POU2F3-206ENST00000543440 1953 ntAPPRIS P1 TSL 1 (best) BASIC31.44■■■□□ 2.62
UBR1Q8IWV7 CDC16-204ENST00000360383 2211 ntAPPRIS P3 TSL 5 BASIC31.44■■■□□ 2.62
UBR1Q8IWV7 MAL-201ENST00000309988 1112 ntAPPRIS P1 TSL 1 (best) BASIC31.44■■■□□ 2.62
UBR1Q8IWV7 C19orf25-213ENST00000592872 1287 ntAPPRIS P1 TSL 2 BASIC31.44■■■□□ 2.62
UBR1Q8IWV7 AJAP1-201ENST00000378190 2383 ntAPPRIS P1 TSL 5 BASIC31.44■■■□□ 2.62
UBR1Q8IWV7 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC31.44■■■□□ 2.62
UBR1Q8IWV7 PRDM13-202ENST00000369215 2429 ntAPPRIS P1 TSL 1 (best) BASIC31.44■■■□□ 2.62
UBR1Q8IWV7 AL591684.2-201ENST00000605970 1594 ntTSL 5 BASIC31.43■■■□□ 2.62
UBR1Q8IWV7 PXK-203ENST00000383715 1756 ntTSL 5 BASIC31.43■■■□□ 2.62
UBR1Q8IWV7 OXSR1-203ENST00000446845 1908 ntTSL 5 BASIC31.43■■■□□ 2.62
UBR1Q8IWV7 BX322557.1-202ENST00000400362 1460 ntTSL 1 (best) BASIC31.43■■■□□ 2.62
UBR1Q8IWV7 TMCC2-209ENST00000637895 1455 ntTSL 1 (best) BASIC31.43■■■□□ 2.62
UBR1Q8IWV7 CPED1-202ENST00000340646 1056 ntTSL 5 BASIC31.43■■■□□ 2.62
UBR1Q8IWV7 C19orf84-201ENST00000570516 788 ntAPPRIS ALT2 TSL 1 (best) BASIC31.43■■■□□ 2.62
UBR1Q8IWV7 MAGIX-202ENST00000595224 1238 ntAPPRIS P2 TSL 5 BASIC31.43■■■□□ 2.62
UBR1Q8IWV7 SCAMP3-202ENST00000355379 1537 ntTSL 1 (best) BASIC31.42■■■□□ 2.62
UBR1Q8IWV7 MRAP2-201ENST00000257776 2153 ntAPPRIS P1 TSL 1 (best) BASIC31.42■■■□□ 2.62
UBR1Q8IWV7 WIPF1-207ENST00000410117 777 ntTSL 3 BASIC31.42■■■□□ 2.62
UBR1Q8IWV7 SERP1-208ENST00000491660 830 ntTSL 2 BASIC31.42■■■□□ 2.62
UBR1Q8IWV7 AC034102.6-201ENST00000550947 559 ntTSL 4 BASIC31.42■■■□□ 2.62
UBR1Q8IWV7 LIMD2-206ENST00000578993 602 ntTSL 3 BASIC31.42■■■□□ 2.62
UBR1Q8IWV7 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC31.42■■■□□ 2.62
UBR1Q8IWV7 MGST3-205ENST00000367889 1015 ntAPPRIS P1 TSL 1 (best) BASIC31.41■■■□□ 2.62
UBR1Q8IWV7 LIMD2-202ENST00000578061 756 ntAPPRIS P1 TSL 2 BASIC31.41■■■□□ 2.62
UBR1Q8IWV7 AP001160.3-201ENST00000601484 763 ntBASIC31.41■■■□□ 2.62
UBR1Q8IWV7 MFSD7-209ENST00000515118 1556 ntTSL 5 BASIC31.41■■■□□ 2.62
UBR1Q8IWV7 HRASLS5-201ENST00000301790 1166 ntAPPRIS P3 TSL 1 (best) BASIC31.41■■■□□ 2.62
UBR1Q8IWV7 PGF-203ENST00000553716 1699 ntAPPRIS ALT2 TSL 1 (best) BASIC31.4■■■□□ 2.62
UBR1Q8IWV7 PPP1CA-202ENST00000358239 1054 ntTSL 2 BASIC31.4■■■□□ 2.62
UBR1Q8IWV7 FNDC11-201ENST00000370097 1119 ntAPPRIS P1 TSL 2 BASIC31.4■■■□□ 2.62
UBR1Q8IWV7 IPO13-201ENST00000372339 1201 ntTSL 2 BASIC31.4■■■□□ 2.62
UBR1Q8IWV7 CERS4-205ENST00000558331 1803 ntTSL 5 BASIC31.4■■■□□ 2.62
UBR1Q8IWV7 MEIS2-204ENST00000397620 2295 ntTSL 2 BASIC31.4■■■□□ 2.62
UBR1Q8IWV7 GOLGA7-201ENST00000357743 2027 ntAPPRIS P1 TSL 1 (best) BASIC31.39■■■□□ 2.62
UBR1Q8IWV7 BIN1-201ENST00000259238 2338 ntTSL 1 (best) BASIC31.39■■■□□ 2.62
UBR1Q8IWV7 MDK-205ENST00000405308 1166 ntAPPRIS P2 TSL 2 BASIC31.39■■■□□ 2.62
UBR1Q8IWV7 PHB2-213ENST00000546111 858 ntTSL 2 BASIC31.39■■■□□ 2.62
UBR1Q8IWV7 AC013268.1-206ENST00000638368 961 ntBASIC31.39■■■□□ 2.62
UBR1Q8IWV7 AC112229.1-201ENST00000639295 961 ntBASIC31.39■■■□□ 2.62
UBR1Q8IWV7 EPHA8-202ENST00000374644 1802 ntTSL 1 (best) BASIC31.39■■■□□ 2.62
UBR1Q8IWV7 IRF3-201ENST00000309877 1691 ntAPPRIS P1 TSL 1 (best) BASIC31.39■■■□□ 2.62
UBR1Q8IWV7 FGF19-201ENST00000294312 2447 ntAPPRIS P1 TSL 1 (best) BASIC31.38■■■□□ 2.61
UBR1Q8IWV7 RARRES2P4-201ENST00000514074 484 ntBASIC31.38■■■□□ 2.61
UBR1Q8IWV7 TPT1-AS1-211ENST00000520622 604 ntTSL 4 BASIC31.38■■■□□ 2.61
UBR1Q8IWV7 AC005786.3-201ENST00000589360 565 ntTSL 3 BASIC31.38■■■□□ 2.61
UBR1Q8IWV7 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC31.38■■■□□ 2.61
UBR1Q8IWV7 AC083880.1-201ENST00000608266 535 ntBASIC31.38■■■□□ 2.61
UBR1Q8IWV7 SIRT3-202ENST00000524564 1395 ntTSL 2 BASIC31.38■■■□□ 2.61
UBR1Q8IWV7 CYP4V2-201ENST00000378802 2042 ntAPPRIS P1 TSL 1 (best) BASIC31.38■■■□□ 2.61
UBR1Q8IWV7 AKAP17A-202ENST00000381261 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC31.38■■■□□ 2.61
UBR1Q8IWV7 TXNRD2-201ENST00000334363 1893 ntTSL 1 (best) BASIC31.38■■■□□ 2.61
UBR1Q8IWV7 ECEL1-202ENST00000409941 2322 ntAPPRIS ALT1 TSL 1 (best) BASIC31.38■■■□□ 2.61
UBR1Q8IWV7 RAC1-202ENST00000356142 907 ntTSL 1 (best) BASIC31.38■■■□□ 2.61
UBR1Q8IWV7 TXNL4A-203ENST00000585474 1185 ntTSL 1 (best) BASIC31.38■■■□□ 2.61
UBR1Q8IWV7 PROSER2-205ENST00000622831 1646 ntAPPRIS ALT2 TSL 1 (best) BASIC31.37■■■□□ 2.61
UBR1Q8IWV7 GNPTG-201ENST00000204679 1983 ntAPPRIS P1 TSL 1 (best) BASIC31.37■■■□□ 2.61
UBR1Q8IWV7 PDIA2-201ENST00000219406 1698 ntAPPRIS P2 TSL 1 (best) BASIC31.37■■■□□ 2.61
Retrieved 100 of 98,524 protein–RNA pairs in 18.6 ms