Protein–RNA interactions for Protein: Q86VH4

LRRTM4, Leucine-rich repeat transmembrane neuronal protein 4, humanhuman

Predictions only

Length 590 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRTM4Q86VH4 HIST1H2AL-201ENST00000613174 393 ntAPPRIS P1 BASIC21.37■■□□□ 1.01
LRRTM4Q86VH4 PANK2-201ENST00000316562 2280 ntAPPRIS P2 TSL 1 (best) BASIC21.37■■□□□ 1.01
LRRTM4Q86VH4 AARD-201ENST00000378279 2299 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
LRRTM4Q86VH4 ACTR1B-201ENST00000289228 2243 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
LRRTM4Q86VH4 NAT8L-202ENST00000423729 5870 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
LRRTM4Q86VH4 SSUH2-217ENST00000544814 1636 ntAPPRIS ALT2 TSL 2 BASIC21.37■■□□□ 1.01
LRRTM4Q86VH4 HAS1-201ENST00000222115 2087 ntAPPRIS P3 TSL 1 (best) BASIC21.36■■□□□ 1.01
LRRTM4Q86VH4 NPAS3-206ENST00000548645 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC21.36■■□□□ 1.01
LRRTM4Q86VH4 BTBD7-205ENST00000554565 2697 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
LRRTM4Q86VH4 UQCR11-203ENST00000591899 1324 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
LRRTM4Q86VH4 NHLH1-201ENST00000302101 2563 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
LRRTM4Q86VH4 URAD-201ENST00000332715 931 ntAPPRIS P1 TSL 5 BASIC21.36■■□□□ 1.01
LRRTM4Q86VH4 AC097381.1-201ENST00000429019 1296 ntBASIC21.36■■□□□ 1.01
LRRTM4Q86VH4 PRKCQ-AS1-202ENST00000445427 1133 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
LRRTM4Q86VH4 YBX1P1-201ENST00000445822 960 ntBASIC21.36■■□□□ 1.01
LRRTM4Q86VH4 BCAP29-209ENST00000465919 942 ntTSL 2 BASIC21.36■■□□□ 1.01
LRRTM4Q86VH4 AIPL1-206ENST00000571740 1202 ntAPPRIS ALT2 TSL 1 (best) BASIC21.36■■□□□ 1.01
LRRTM4Q86VH4 CAPNS1-205ENST00000588780 1035 ntAPPRIS ALT2 TSL 5 BASIC21.36■■□□□ 1.01
LRRTM4Q86VH4 MIR6821-201ENST00000617625 74 ntBASIC21.36■■□□□ 1.01
LRRTM4Q86VH4 PLEKHO1-201ENST00000369124 2050 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
LRRTM4Q86VH4 ADGRB1-202ENST00000517894 6241 ntAPPRIS P1 TSL 5 BASIC21.36■■□□□ 1.01
LRRTM4Q86VH4 WRNIP1-205ENST00000618555 2651 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
LRRTM4Q86VH4 DBP-201ENST00000222122 2229 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
LRRTM4Q86VH4 BASP1-203ENST00000616743 1711 ntAPPRIS P1 TSL 3 BASIC21.35■■□□□ 1.01
LRRTM4Q86VH4 PHLDB3-207ENST00000599242 2286 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
LRRTM4Q86VH4 TOX2-201ENST00000341197 1880 ntAPPRIS P1 TSL 2 BASIC21.35■■□□□ 1.01
LRRTM4Q86VH4 TMCC2-209ENST00000637895 1455 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
LRRTM4Q86VH4 PNKP-201ENST00000322344 2041 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
LRRTM4Q86VH4 LYPLA1-201ENST00000316963 2585 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
LRRTM4Q86VH4 PCSK1N-201ENST00000218230 1050 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
LRRTM4Q86VH4 TESC-201ENST00000335209 1041 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
LRRTM4Q86VH4 TMEM61-201ENST00000371268 1097 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
LRRTM4Q86VH4 CEP104-201ENST00000378223 1121 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
LRRTM4Q86VH4 ORMDL1-202ENST00000392349 1137 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
LRRTM4Q86VH4 NT5C3AP1-201ENST00000394500 1012 ntBASIC21.35■■□□□ 1.01
LRRTM4Q86VH4 AP2S1-203ENST00000593442 636 ntTSL 2 BASIC21.35■■□□□ 1.01
LRRTM4Q86VH4 POLR2E-214ENST00000619917 932 ntTSL 5 BASIC21.35■■□□□ 1.01
LRRTM4Q86VH4 SPNS1-207ENST00000565975 1979 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
LRRTM4Q86VH4 ZNF395-210ENST00000523095 1790 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
LRRTM4Q86VH4 COG8-201ENST00000562081 1731 ntAPPRIS P1 TSL 5 BASIC21.35■■□□□ 1.01
LRRTM4Q86VH4 AP1S1-201ENST00000337619 1306 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
LRRTM4Q86VH4 ZDHHC14-204ENST00000414563 3134 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
LRRTM4Q86VH4 ZNF668-205ENST00000426488 2282 ntTSL 5 BASIC21.34■■□□□ 1.01
LRRTM4Q86VH4 NDUFB2-201ENST00000247866 504 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
LRRTM4Q86VH4 CRB3-202ENST00000356762 733 ntAPPRIS P4 TSL 1 (best) BASIC21.34■■□□□ 1.01
LRRTM4Q86VH4 AC012313.1-203ENST00000597980 570 ntTSL 4 BASIC21.34■■□□□ 1.01
LRRTM4Q86VH4 C21orf2-202ENST00000339818 2233 ntAPPRIS P3 TSL 1 (best) BASIC21.34■■□□□ 1.01
LRRTM4Q86VH4 SLC25A47-202ENST00000557052 1552 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
LRRTM4Q86VH4 AP006623.1-201ENST00000506172 2061 ntTSL 5 BASIC21.33■■□□□ 1.01
LRRTM4Q86VH4 SLAIN1-213ENST00000466548 2637 ntAPPRIS ALT2 TSL 5 BASIC21.33■■□□□ 1.01
LRRTM4Q86VH4 KLC1-205ENST00000380038 2322 ntTSL 2 BASIC21.33■■□□□ 1.01
LRRTM4Q86VH4 TARBP2-201ENST00000266987 1867 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
LRRTM4Q86VH4 FOXO1-201ENST00000379561 5735 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
LRRTM4Q86VH4 C1orf229-201ENST00000623686 2258 ntBASIC21.33■■□□□ 1.01
LRRTM4Q86VH4 RNF208-201ENST00000391553 1077 ntAPPRIS P1 BASIC21.33■■□□□ 1.01
LRRTM4Q86VH4 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
LRRTM4Q86VH4 AC123595.1-201ENST00000440769 1046 ntBASIC21.33■■□□□ 1.01
LRRTM4Q86VH4 ESRRAP2-201ENST00000418437 1549 ntBASIC21.33■■□□□ 1
LRRTM4Q86VH4 RALB-201ENST00000272519 2344 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
LRRTM4Q86VH4 BMP2K-204ENST00000502871 3195 ntAPPRIS P3 TSL 1 (best) BASIC21.32■■□□□ 1
LRRTM4Q86VH4 TARSL2-207ENST00000615656 2356 ntAPPRIS ALT2 TSL 5 BASIC21.32■■□□□ 1
LRRTM4Q86VH4 STOML1-201ENST00000316900 2169 ntTSL 2 BASIC21.32■■□□□ 1
LRRTM4Q86VH4 NXT1-201ENST00000254998 1123 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
LRRTM4Q86VH4 MRPL14-201ENST00000372014 959 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
LRRTM4Q86VH4 ASPDH-202ENST00000389208 1040 ntAPPRIS P1 TSL 5 BASIC21.32■■□□□ 1
LRRTM4Q86VH4 C16orf86-201ENST00000403458 1267 ntAPPRIS P2 TSL 1 (best) BASIC21.32■■□□□ 1
LRRTM4Q86VH4 AC092675.2-201ENST00000413274 541 ntTSL 4 BASIC21.32■■□□□ 1
LRRTM4Q86VH4 PLD4-205ENST00000553861 667 ntTSL 2 BASIC21.32■■□□□ 1
LRRTM4Q86VH4 FAM222B-208ENST00000581381 556 ntTSL 4 BASIC21.32■■□□□ 1
LRRTM4Q86VH4 ZNF511-202ENST00000361518 1520 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
LRRTM4Q86VH4 BX005040.4-201ENST00000637145 1518 ntBASIC21.32■■□□□ 1
LRRTM4Q86VH4 NOXO1-201ENST00000354249 1618 ntTSL 1 (best) BASIC21.32■■□□□ 1
LRRTM4Q86VH4 NAPRT-204ENST00000449291 1965 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
LRRTM4Q86VH4 AVPR2-201ENST00000337474 1622 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
LRRTM4Q86VH4 NEBL-AS1-202ENST00000439097 661 ntTSL 2 BASIC21.31■■□□□ 1
LRRTM4Q86VH4 ARRDC2-202ENST00000379656 2528 ntTSL 2 BASIC21.31■■□□□ 1
LRRTM4Q86VH4 BARX2-201ENST00000281437 1813 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
LRRTM4Q86VH4 AL137002.2-201ENST00000639766 2238 ntTSL 5 BASIC21.31■■□□□ 1
LRRTM4Q86VH4 PEX11G-203ENST00000593942 1345 ntTSL 5 BASIC21.3■■□□□ 1
LRRTM4Q86VH4 CRHR1-202ENST00000314537 2535 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
LRRTM4Q86VH4 AC137767.1-201ENST00000602918 1920 ntBASIC21.3■■□□□ 1
LRRTM4Q86VH4 DENND5A-201ENST00000328194 5031 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
LRRTM4Q86VH4 MOSPD3-202ENST00000379527 1016 ntAPPRIS P1 TSL 5 BASIC21.3■■□□□ 1
LRRTM4Q86VH4 ATP6V0B-204ENST00000471859 865 ntTSL 5 BASIC21.3■■□□□ 1
LRRTM4Q86VH4 LRRC37A17P-202ENST00000570478 572 ntTSL 4 BASIC21.3■■□□□ 1
LRRTM4Q86VH4 AC087623.3-201ENST00000607047 1098 ntBASIC21.3■■□□□ 1
LRRTM4Q86VH4 MIR5787-201ENST00000611784 55 ntBASIC21.3■■□□□ 1
LRRTM4Q86VH4 IRX4-202ENST00000505790 2538 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
LRRTM4Q86VH4 SLC19A1-209ENST00000485649 1896 ntAPPRIS ALT2 TSL 2 BASIC21.3■■□□□ 1
LRRTM4Q86VH4 ZFP69B-204ENST00000484445 1976 ntTSL 1 (best) BASIC21.3■■□□□ 1
LRRTM4Q86VH4 DLL3-202ENST00000356433 2055 ntAPPRIS P1 TSL 2 BASIC21.3■■□□□ 1
LRRTM4Q86VH4 KAT2B-201ENST00000263754 4833 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
LRRTM4Q86VH4 HSPB2-201ENST00000304298 1335 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
LRRTM4Q86VH4 CT47B1-201ENST00000371311 1328 ntAPPRIS P1 TSL 5 BASIC21.29■■□□□ 1
LRRTM4Q86VH4 AC135048.1-201ENST00000566056 1318 ntTSL 2 BASIC21.29■■□□□ 1
LRRTM4Q86VH4 OR7E47P-201ENST00000546390 1422 ntBASIC21.29■■□□□ 1
LRRTM4Q86VH4 AL359710.1-201ENST00000427039 1544 ntTSL 2 BASIC21.29■■□□□ 1
LRRTM4Q86VH4 TMEM159-201ENST00000233047 2014 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
LRRTM4Q86VH4 ARHGAP27-207ENST00000528273 2319 ntTSL 1 (best) BASIC21.29■■□□□ 1
LRRTM4Q86VH4 AKT1-201ENST00000349310 2866 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Retrieved 100 of 98,524 protein–RNA pairs in 52 ms