Protein–RNA interactions for Protein: Q86TM3

DDX53, Probable ATP-dependent RNA helicase DDX53, humanhuman

Known RBP Predictions only

Length 631 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX53Q86TM3 SFTPC-205ENST00000521315 1046 ntAPPRIS ALT1 TSL 1 (best) BASIC23.23■■□□□ 1.31
DDX53Q86TM3 AL512625.3-202ENST00000591993 1091 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
DDX53Q86TM3 CERS4-205ENST00000558331 1803 ntTSL 5 BASIC23.23■■□□□ 1.31
DDX53Q86TM3 ALKBH7-201ENST00000245812 1332 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
DDX53Q86TM3 MPND-202ENST00000359935 1475 ntAPPRIS ALT2 TSL 2 BASIC23.23■■□□□ 1.31
DDX53Q86TM3 C3orf18-205ENST00000441239 1490 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
DDX53Q86TM3 ZDHHC7-203ENST00000564466 1488 ntTSL 5 BASIC23.23■■□□□ 1.31
DDX53Q86TM3 TLE6-201ENST00000246112 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC23.23■■□□□ 1.31
DDX53Q86TM3 BASP1-203ENST00000616743 1711 ntAPPRIS P1 TSL 3 BASIC23.22■■□□□ 1.31
DDX53Q86TM3 HSD11B2-201ENST00000326152 1900 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
DDX53Q86TM3 RAMP1-203ENST00000404910 857 ntTSL 2 BASIC23.22■■□□□ 1.31
DDX53Q86TM3 ANKRD63-201ENST00000434396 1143 ntAPPRIS P1 BASIC23.22■■□□□ 1.31
DDX53Q86TM3 AC006970.2-201ENST00000450065 779 ntBASIC23.22■■□□□ 1.31
DDX53Q86TM3 AC092171.1-201ENST00000455866 753 ntTSL 2 BASIC23.22■■□□□ 1.31
DDX53Q86TM3 EMC9-206ENST00000560403 872 ntTSL 2 BASIC23.22■■□□□ 1.31
DDX53Q86TM3 AC104771.1-201ENST00000603335 964 ntBASIC23.22■■□□□ 1.31
DDX53Q86TM3 TRAPPC3-208ENST00000616074 1114 ntTSL 5 BASIC23.22■■□□□ 1.31
DDX53Q86TM3 TMEM64-203ENST00000458549 4997 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
DDX53Q86TM3 SDR39U1-208ENST00000554698 1364 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
DDX53Q86TM3 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
DDX53Q86TM3 EN1-201ENST00000295206 2457 ntAPPRIS P1 TSL 2 BASIC23.22■■□□□ 1.31
DDX53Q86TM3 LACTBL1-201ENST00000426928 1641 ntAPPRIS P5 TSL 5 BASIC23.22■■□□□ 1.31
DDX53Q86TM3 AC005224.4-201ENST00000583262 1652 ntBASIC23.22■■□□□ 1.31
DDX53Q86TM3 AC099805.1-201ENST00000523987 1797 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
DDX53Q86TM3 ITM2C-203ENST00000335005 1889 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
DDX53Q86TM3 SEPT4-205ENST00000426861 1906 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
DDX53Q86TM3 RNF223-201ENST00000453464 1902 ntAPPRIS P1 TSL 2 BASIC23.21■■□□□ 1.31
DDX53Q86TM3 TBC1D10A-201ENST00000215790 2077 ntAPPRIS P3 TSL 1 (best) BASIC23.21■■□□□ 1.31
DDX53Q86TM3 VSTM4-201ENST00000298454 2170 ntAPPRIS P3 TSL 2 BASIC23.21■■□□□ 1.31
DDX53Q86TM3 NT5C-201ENST00000245552 954 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
DDX53Q86TM3 DCXR-201ENST00000306869 887 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
DDX53Q86TM3 LARP6-202ENST00000344870 527 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
DDX53Q86TM3 MLLT10-204ENST00000377091 905 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
DDX53Q86TM3 ZNF696-204ENST00000520333 605 ntTSL 5 BASIC23.21■■□□□ 1.31
DDX53Q86TM3 IGFALS-203ENST00000568221 730 ntTSL 4 BASIC23.21■■□□□ 1.31
DDX53Q86TM3 C5AR2-202ENST00000600626 1287 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
DDX53Q86TM3 AC009237.3-201ENST00000393279 1427 ntBASIC23.21■■□□□ 1.31
DDX53Q86TM3 ADARB2-202ENST00000381310 1810 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
DDX53Q86TM3 TMEM102-201ENST00000323206 1973 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
DDX53Q86TM3 TMEM102-202ENST00000396568 1962 ntAPPRIS P1 TSL 2 BASIC23.21■■□□□ 1.31
DDX53Q86TM3 TMEM185A-207ENST00000600449 2840 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
DDX53Q86TM3 GPR161-203ENST00000367836 1983 ntTSL 2 BASIC23.2■■□□□ 1.3
DDX53Q86TM3 PARP9-207ENST00000492382 1837 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
DDX53Q86TM3 UCK2-201ENST00000367879 1375 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
DDX53Q86TM3 ZNF292-204ENST00000392985 1096 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
DDX53Q86TM3 AL645608.9-201ENST00000442292 829 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
DDX53Q86TM3 C5orf49-201ENST00000399810 2385 ntAPPRIS P2 TSL 1 (best) BASIC23.2■■□□□ 1.3
DDX53Q86TM3 ST6GALNAC2-201ENST00000225276 2170 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
DDX53Q86TM3 ZPBP2-201ENST00000348931 1543 ntAPPRIS P4 TSL 1 (best) BASIC23.19■■□□□ 1.3
DDX53Q86TM3 UTS2R-201ENST00000313135 1357 ntAPPRIS P1 BASIC23.19■■□□□ 1.3
DDX53Q86TM3 MDK-213ENST00000617138 635 ntTSL 2 BASIC23.19■■□□□ 1.3
DDX53Q86TM3 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC23.19■■□□□ 1.3
DDX53Q86TM3 DECR2-201ENST00000219481 1615 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
DDX53Q86TM3 ADAP2-204ENST00000580525 1598 ntAPPRIS ALT2 TSL 1 (best) BASIC23.18■■□□□ 1.3
DDX53Q86TM3 RAD9A-201ENST00000307980 2119 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
DDX53Q86TM3 MEIS3-201ENST00000331559 2104 ntAPPRIS ALT2 TSL 5 BASIC23.18■■□□□ 1.3
DDX53Q86TM3 LINC01184-201ENST00000499346 1380 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
DDX53Q86TM3 RHOD-201ENST00000308831 1129 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
DDX53Q86TM3 NCF1B-203ENST00000435988 1254 ntBASIC23.18■■□□□ 1.3
DDX53Q86TM3 CDKN3-204ENST00000442975 727 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
DDX53Q86TM3 ZNF717-203ENST00000477374 1169 ntTSL 2 BASIC23.18■■□□□ 1.3
DDX53Q86TM3 ARG2-201ENST00000261783 2045 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
DDX53Q86TM3 DTNB-206ENST00000404103 2384 ntAPPRIS ALT2 TSL 5 BASIC23.18■■□□□ 1.3
DDX53Q86TM3 MID1IP1-203ENST00000457894 1902 ntAPPRIS P1 TSL 3 BASIC23.18■■□□□ 1.3
DDX53Q86TM3 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC23.17■■□□□ 1.3
DDX53Q86TM3 WDR86-203ENST00000469830 1691 ntTSL 2 BASIC23.17■■□□□ 1.3
DDX53Q86TM3 HBM-201ENST00000356815 506 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
DDX53Q86TM3 AC037459.4-201ENST00000517384 585 ntTSL 4 BASIC23.17■■□□□ 1.3
DDX53Q86TM3 AL109923.1-201ENST00000618799 583 ntBASIC23.17■■□□□ 1.3
DDX53Q86TM3 GSTM3-202ENST00000361066 1565 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
DDX53Q86TM3 KRT87P-202ENST00000534226 1464 ntBASIC23.17■■□□□ 1.3
DDX53Q86TM3 IMPDH1-210ENST00000480861 1765 ntAPPRIS P2 TSL 2 BASIC23.17■■□□□ 1.3
DDX53Q86TM3 AC090377.1-201ENST00000585691 1762 ntTSL 3 BASIC23.17■■□□□ 1.3
DDX53Q86TM3 FAM193A-211ENST00000637812 4885 ntAPPRIS ALT2 TSL 5 BASIC23.16■■□□□ 1.3
DDX53Q86TM3 ABHD12B-201ENST00000337334 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC23.16■■□□□ 1.3
DDX53Q86TM3 TMEM185B-201ENST00000426077 2131 ntAPPRIS P1 BASIC23.16■■□□□ 1.3
DDX53Q86TM3 LOXL1-AS1-208ENST00000565756 885 ntTSL 2 BASIC23.16■■□□□ 1.3
DDX53Q86TM3 CACNB1-203ENST00000394310 1753 ntAPPRIS ALT1 TSL 1 (best) BASIC23.16■■□□□ 1.3
DDX53Q86TM3 REXO4-202ENST00000371942 2360 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
DDX53Q86TM3 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC23.15■■□□□ 1.3
DDX53Q86TM3 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC23.15■■□□□ 1.3
DDX53Q86TM3 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC23.15■■□□□ 1.3
DDX53Q86TM3 PACRGL-208ENST00000503585 1582 ntAPPRIS P1 TSL 2 BASIC23.15■■□□□ 1.3
DDX53Q86TM3 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC23.15■■□□□ 1.3
DDX53Q86TM3 CFD-201ENST00000327726 1201 ntAPPRIS P3 TSL 1 (best) BASIC23.15■■□□□ 1.3
DDX53Q86TM3 ZNF451-202ENST00000370702 458 ntTSL 2 BASIC23.15■■□□□ 1.3
DDX53Q86TM3 PIGP-203ENST00000399098 972 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
DDX53Q86TM3 RORB-AS1-201ENST00000417576 1178 ntTSL 5 BASIC23.15■■□□□ 1.3
DDX53Q86TM3 TRIQK-221ENST00000524107 737 ntAPPRIS P1 TSL 3 BASIC23.15■■□□□ 1.3
DDX53Q86TM3 AC104187.1-201ENST00000607510 612 ntBASIC23.15■■□□□ 1.3
DDX53Q86TM3 TBXA2R-202ENST00000411851 1494 ntTSL 2 BASIC23.15■■□□□ 1.3
DDX53Q86TM3 C19orf67-203ENST00000548523 1427 ntAPPRIS P2 TSL 5 BASIC23.15■■□□□ 1.3
DDX53Q86TM3 RASSF5-202ENST00000579436 2064 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
DDX53Q86TM3 SERBP1-202ENST00000370990 1621 ntAPPRIS ALT2 TSL 1 (best) BASIC23.15■■□□□ 1.3
DDX53Q86TM3 HRASLS-201ENST00000264735 1066 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
DDX53Q86TM3 SNAP23-214ENST00000567094 834 ntTSL 3 BASIC23.14■■□□□ 1.29
DDX53Q86TM3 MFSD11-216ENST00000590393 1141 ntBASIC23.14■■□□□ 1.29
DDX53Q86TM3 D2HGDH-203ENST00000403782 2208 ntTSL 2 BASIC23.14■■□□□ 1.29
DDX53Q86TM3 WDR86-201ENST00000334493 2023 ntAPPRIS P1 TSL 5 BASIC23.14■■□□□ 1.29
DDX53Q86TM3 CCR10-203ENST00000591765 1942 ntTSL 3 BASIC23.14■■□□□ 1.29
Retrieved 100 of 98,524 protein–RNA pairs in 21.9 ms