Protein–RNA interactions for Protein: Q7Z398

ZNF550, Zinc finger protein 550, humanhuman

Predictions only

Length 422 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF550Q7Z398 AC073188.6-202ENST00000616616 2281 ntTSL 1 (best) BASIC20■□□□□ 0.79
ZNF550Q7Z398 MFSD7-203ENST00000404286 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
ZNF550Q7Z398 PIP5KL1-202ENST00000388747 2198 ntAPPRIS P1 TSL 5 BASIC20■□□□□ 0.79
ZNF550Q7Z398 SLC41A3-202ENST00000346785 1705 ntTSL 2 BASIC20■□□□□ 0.79
ZNF550Q7Z398 WDR86-AS1-204ENST00000489632 751 ntTSL 3 BASIC20■□□□□ 0.79
ZNF550Q7Z398 NDUFS3-206ENST00000528192 561 ntTSL 5 BASIC20■□□□□ 0.79
ZNF550Q7Z398 AC009097.2-201ENST00000562763 465 ntTSL 2 BASIC20■□□□□ 0.79
ZNF550Q7Z398 SRRM2-231ENST00000630499 1207 ntTSL 1 (best) BASIC20■□□□□ 0.79
ZNF550Q7Z398 AC093323.1-201ENST00000307533 2311 ntTSL 1 (best) BASIC20■□□□□ 0.79
ZNF550Q7Z398 TLX2-201ENST00000233638 2136 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
ZNF550Q7Z398 GPR137B-202ENST00000366592 2042 ntAPPRIS P2 TSL 1 (best) BASIC20■□□□□ 0.79
ZNF550Q7Z398 P4HTM-201ENST00000343546 2268 ntTSL 1 (best) BASIC20■□□□□ 0.79
ZNF550Q7Z398 AKT1S1-206ENST00000391834 1849 ntAPPRIS P1 TSL 5 BASIC19.99■□□□□ 0.79
ZNF550Q7Z398 STX4-201ENST00000313843 1481 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
ZNF550Q7Z398 ZNF410-206ENST00000540593 1722 ntTSL 2 BASIC19.99■□□□□ 0.79
ZNF550Q7Z398 PDIA6-207ENST00000540494 2509 ntAPPRIS ALT1 TSL 2 BASIC19.99■□□□□ 0.79
ZNF550Q7Z398 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
ZNF550Q7Z398 IL20RA-202ENST00000367746 1244 ntTSL 2 BASIC19.99■□□□□ 0.79
ZNF550Q7Z398 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC19.99■□□□□ 0.79
ZNF550Q7Z398 KRTAP5-4-202ENST00000616115 660 ntAPPRIS ALT2 TSL 5 BASIC19.99■□□□□ 0.79
ZNF550Q7Z398 FBXW7-202ENST00000281708 4976 ntAPPRIS P4 TSL 1 (best) BASIC19.99■□□□□ 0.79
ZNF550Q7Z398 INPPL1-201ENST00000298229 4733 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
ZNF550Q7Z398 NOTUM-201ENST00000409678 2329 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
ZNF550Q7Z398 CERS5-201ENST00000317551 2051 ntAPPRIS P3 TSL 2 BASIC19.99■□□□□ 0.79
ZNF550Q7Z398 SLC35A3-204ENST00000427993 2062 ntAPPRIS P1 TSL 5 BASIC19.99■□□□□ 0.79
ZNF550Q7Z398 SLC25A42-201ENST00000318596 3120 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
ZNF550Q7Z398 ARL13B-205ENST00000471138 2206 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
ZNF550Q7Z398 CCDC166-201ENST00000542437 1320 ntAPPRIS P1 TSL 2 BASIC19.99■□□□□ 0.79
ZNF550Q7Z398 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC19.98■□□□□ 0.79
ZNF550Q7Z398 SSUH2-217ENST00000544814 1636 ntAPPRIS ALT2 TSL 2 BASIC19.98■□□□□ 0.79
ZNF550Q7Z398 CAPN12-212ENST00000601953 2381 ntTSL 5 BASIC19.98■□□□□ 0.79
ZNF550Q7Z398 TRADD-202ENST00000486556 1833 ntTSL 2 BASIC19.98■□□□□ 0.79
ZNF550Q7Z398 SKIDA1-201ENST00000444772 2667 ntAPPRIS ALT2 TSL 5 BASIC19.98■□□□□ 0.79
ZNF550Q7Z398 C2orf82-201ENST00000331342 465 ntAPPRIS P2 TSL 1 (best) BASIC19.98■□□□□ 0.79
ZNF550Q7Z398 AC084116.4-201ENST00000524320 484 ntTSL 2 BASIC19.98■□□□□ 0.79
ZNF550Q7Z398 AC133561.4-201ENST00000566112 224 ntBASIC19.98■□□□□ 0.79
ZNF550Q7Z398 AL138724.1-201ENST00000606771 1088 ntBASIC19.98■□□□□ 0.79
ZNF550Q7Z398 AL031602.1-201ENST00000633169 911 ntBASIC19.98■□□□□ 0.79
ZNF550Q7Z398 AC068587.7-201ENST00000641602 218 ntBASIC19.98■□□□□ 0.79
ZNF550Q7Z398 TRAM2-AS1-204ENST00000606714 2453 ntTSL 2 BASIC19.98■□□□□ 0.79
ZNF550Q7Z398 FRAT1-201ENST00000371021 2649 ntAPPRIS P1 BASIC19.98■□□□□ 0.79
ZNF550Q7Z398 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC19.98■□□□□ 0.79
ZNF550Q7Z398 C2orf72-201ENST00000373640 3657 ntAPPRIS P1 TSL 2 BASIC19.98■□□□□ 0.79
ZNF550Q7Z398 FAM167A-204ENST00000528897 1620 ntAPPRIS P1 TSL 2 BASIC19.98■□□□□ 0.79
ZNF550Q7Z398 GPR6-202ENST00000414000 1945 ntTSL 2 BASIC19.98■□□□□ 0.79
ZNF550Q7Z398 RBMS1-205ENST00000409972 1815 ntTSL 5 BASIC19.97■□□□□ 0.79
ZNF550Q7Z398 STAP2-206ENST00000600324 1508 ntAPPRIS P3 TSL 2 BASIC19.97■□□□□ 0.79
ZNF550Q7Z398 DTX4-201ENST00000227451 5642 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
ZNF550Q7Z398 SYT6-210ENST00000641643 1587 ntBASIC19.97■□□□□ 0.79
ZNF550Q7Z398 NIPA2-205ENST00000539711 1412 ntTSL 2 BASIC19.97■□□□□ 0.79
ZNF550Q7Z398 C19orf60-201ENST00000358607 839 ntAPPRIS P3 TSL 1 (best) BASIC19.97■□□□□ 0.79
ZNF550Q7Z398 C19orf60-202ENST00000450195 702 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
ZNF550Q7Z398 OR2I1P-207ENST00000453522 948 ntBASIC19.97■□□□□ 0.79
ZNF550Q7Z398 TBC1D22A-206ENST00000407381 1949 ntTSL 5 BASIC19.97■□□□□ 0.79
ZNF550Q7Z398 CABLES1-201ENST00000256925 5002 ntAPPRIS P4 TSL 1 (best) BASIC19.97■□□□□ 0.79
ZNF550Q7Z398 WISP2-203ENST00000372868 1600 ntAPPRIS P1 TSL 3 BASIC19.97■□□□□ 0.79
ZNF550Q7Z398 ANKRD44-204ENST00000409919 1622 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
ZNF550Q7Z398 YAP1-210ENST00000615667 5398 ntAPPRIS ALT2 TSL 5 BASIC19.97■□□□□ 0.79
ZNF550Q7Z398 B3GALT6-201ENST00000379198 2777 ntAPPRIS P1 BASIC19.97■□□□□ 0.79
ZNF550Q7Z398 LMF1-202ENST00000543238 2103 ntTSL 2 BASIC19.97■□□□□ 0.79
ZNF550Q7Z398 STX4-202ENST00000394998 1498 ntTSL 2 BASIC19.97■□□□□ 0.79
ZNF550Q7Z398 MTURN-201ENST00000324453 5937 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
ZNF550Q7Z398 AC092490.1-203ENST00000514568 1972 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
ZNF550Q7Z398 KCNAB3-201ENST00000303790 2458 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
ZNF550Q7Z398 AC135279.3-201ENST00000610945 1311 ntBASIC19.97■□□□□ 0.79
ZNF550Q7Z398 C11orf96-202ENST00000528572 1834 ntBASIC19.97■□□□□ 0.79
ZNF550Q7Z398 ZNF584-203ENST00000593920 2187 ntTSL 2 BASIC19.97■□□□□ 0.79
ZNF550Q7Z398 LMLN-210ENST00000482695 2010 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
ZNF550Q7Z398 SNHG7-201ENST00000414282 2357 ntTSL 2 BASIC19.97■□□□□ 0.79
ZNF550Q7Z398 DUX4-203ENST00000565211 1710 ntAPPRIS P2 TSL 1 (best) BASIC19.96■□□□□ 0.79
ZNF550Q7Z398 AL121749.1-201ENST00000635993 1768 ntTSL 5 BASIC19.96■□□□□ 0.79
ZNF550Q7Z398 NUDT16L1-204ENST00000586536 1406 ntTSL 2 BASIC19.96■□□□□ 0.79
ZNF550Q7Z398 P4HA2-202ENST00000360568 2313 ntAPPRIS ALT1 TSL 1 (best) BASIC19.96■□□□□ 0.79
ZNF550Q7Z398 C6orf136-201ENST00000293604 1978 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
ZNF550Q7Z398 CXCL14-201ENST00000337225 1971 ntAPPRIS P2 TSL 1 (best) BASIC19.96■□□□□ 0.79
ZNF550Q7Z398 FDFT1-201ENST00000220584 2176 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
ZNF550Q7Z398 ZNF32-202ENST00000395797 1201 ntAPPRIS P1 TSL 2 BASIC19.96■□□□□ 0.79
ZNF550Q7Z398 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC19.96■□□□□ 0.79
ZNF550Q7Z398 CDKN2A-206ENST00000494262 989 ntTSL 3 BASIC19.96■□□□□ 0.79
ZNF550Q7Z398 AC024257.2-201ENST00000549699 147 ntBASIC19.96■□□□□ 0.79
ZNF550Q7Z398 AL359317.1-201ENST00000556316 578 ntTSL 4 BASIC19.96■□□□□ 0.79
ZNF550Q7Z398 AC142381.2-201ENST00000566120 298 ntBASIC19.96■□□□□ 0.79
ZNF550Q7Z398 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
ZNF550Q7Z398 ACTL10-201ENST00000330271 2028 ntAPPRIS P1 BASIC19.96■□□□□ 0.79
ZNF550Q7Z398 ANKHD1-204ENST00000394722 2035 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
ZNF550Q7Z398 SYF2-201ENST00000236273 1345 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
ZNF550Q7Z398 AC004980.1-201ENST00000418663 2667 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
ZNF550Q7Z398 TOP1MT-201ENST00000329245 1958 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
ZNF550Q7Z398 PWWP2A-205ENST00000523662 1819 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
ZNF550Q7Z398 RDX-204ENST00000528498 2511 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
ZNF550Q7Z398 LINC00565-201ENST00000562710 2331 ntBASIC19.95■□□□□ 0.78
ZNF550Q7Z398 HSD17B14-201ENST00000263278 1238 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
ZNF550Q7Z398 RALB-203ENST00000420510 1252 ntAPPRIS P1 TSL 2 BASIC19.95■□□□□ 0.78
ZNF550Q7Z398 PTCHD3P2-201ENST00000424937 1205 ntBASIC19.95■□□□□ 0.78
ZNF550Q7Z398 AC092902.2-206ENST00000625484 846 ntTSL 5 BASIC19.95■□□□□ 0.78
ZNF550Q7Z398 FAM72A-202ENST00000367128 2398 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
ZNF550Q7Z398 FAM72D-201ENST00000400889 2397 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
ZNF550Q7Z398 WDR86-207ENST00000621812 1542 ntTSL 5 BASIC19.95■□□□□ 0.78
ZNF550Q7Z398 RNF39-202ENST00000376751 1970 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
ZNF550Q7Z398 POTED-202ENST00000620442 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 20 ms