Protein–RNA interactions for Protein: Q6P9H4

CNKSR3, Connector enhancer of kinase suppressor of ras 3, humanhuman

Predictions only

Length 555 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNKSR3Q6P9H4 MAP2K5-204ENST00000395476 1689 ntTSL 1 (best) BASIC23.69■■□□□ 1.38
CNKSR3Q6P9H4 AMZ2P1-201ENST00000397713 2259 ntTSL 1 (best) BASIC23.68■■□□□ 1.38
CNKSR3Q6P9H4 CCDC157-202ENST00000399824 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC23.68■■□□□ 1.38
CNKSR3Q6P9H4 SLC9A3-203ENST00000514375 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC23.68■■□□□ 1.38
CNKSR3Q6P9H4 HSF1-201ENST00000400780 2105 ntTSL 5 BASIC23.68■■□□□ 1.38
CNKSR3Q6P9H4 RAB1A-202ENST00000409751 1333 ntTSL 5 BASIC23.68■■□□□ 1.38
CNKSR3Q6P9H4 IL15RA-208ENST00000397251 1046 ntAPPRIS ALT2 TSL 1 (best) BASIC23.68■■□□□ 1.38
CNKSR3Q6P9H4 IL15RA-221ENST00000620865 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC23.68■■□□□ 1.38
CNKSR3Q6P9H4 IL15RA-222ENST00000622442 1160 ntAPPRIS ALT2 TSL 1 (best) BASIC23.68■■□□□ 1.38
CNKSR3Q6P9H4 PARP1-210ENST00000629232 477 ntTSL 5 BASIC23.68■■□□□ 1.38
CNKSR3Q6P9H4 TARDBP-228ENST00000629725 1031 ntTSL 5 BASIC23.68■■□□□ 1.38
CNKSR3Q6P9H4 SERBP1-202ENST00000370990 1621 ntAPPRIS ALT2 TSL 1 (best) BASIC23.67■■□□□ 1.38
CNKSR3Q6P9H4 IL15RA-204ENST00000379977 1626 ntAPPRIS P3 TSL 1 (best) BASIC23.67■■□□□ 1.38
CNKSR3Q6P9H4 LINC01117-201ENST00000443670 699 ntTSL 5 BASIC23.67■■□□□ 1.38
CNKSR3Q6P9H4 IDH1-AS1-202ENST00000448588 489 ntTSL 3 BASIC23.67■■□□□ 1.38
CNKSR3Q6P9H4 ZSWIM7-205ENST00000472495 703 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
CNKSR3Q6P9H4 NDUFS3-207ENST00000529276 558 ntTSL 2 BASIC23.67■■□□□ 1.38
CNKSR3Q6P9H4 AC007216.1-201ENST00000570197 601 ntTSL 4 BASIC23.67■■□□□ 1.38
CNKSR3Q6P9H4 AC018730.2-201ENST00000598623 443 ntTSL 5 BASIC23.67■■□□□ 1.38
CNKSR3Q6P9H4 PON2-217ENST00000633192 1876 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
CNKSR3Q6P9H4 TMEM218-201ENST00000279968 1034 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
CNKSR3Q6P9H4 NFS1-201ENST00000306750 738 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
CNKSR3Q6P9H4 DCTN3-202ENST00000341694 899 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
CNKSR3Q6P9H4 DCTN3-205ENST00000378916 773 ntTSL 2 BASIC23.66■■□□□ 1.38
CNKSR3Q6P9H4 SLC29A4P1-201ENST00000398760 971 ntBASIC23.66■■□□□ 1.38
CNKSR3Q6P9H4 EIF5A-205ENST00000419711 1271 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
CNKSR3Q6P9H4 EDA-210ENST00000527388 927 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
CNKSR3Q6P9H4 MVB12A-212ENST00000543795 1154 ntAPPRIS P1 TSL 5 BASIC23.66■■□□□ 1.38
CNKSR3Q6P9H4 MYCNOS-205ENST00000641950 531 ntBASIC23.66■■□□□ 1.38
CNKSR3Q6P9H4 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
CNKSR3Q6P9H4 TSPAN4-206ENST00000397408 1430 ntAPPRIS P1 TSL 2 BASIC23.66■■□□□ 1.38
CNKSR3Q6P9H4 WDR86-201ENST00000334493 2023 ntAPPRIS P1 TSL 5 BASIC23.66■■□□□ 1.38
CNKSR3Q6P9H4 DUSP8P3-201ENST00000399571 1760 ntBASIC23.65■■□□□ 1.38
CNKSR3Q6P9H4 SMOX-201ENST00000278795 2164 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
CNKSR3Q6P9H4 ABCC6P2-202ENST00000542005 706 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
CNKSR3Q6P9H4 AL138781.1-201ENST00000566567 1274 ntBASIC23.65■■□□□ 1.38
CNKSR3Q6P9H4 NMRAL1-212ENST00000574425 1240 ntAPPRIS P1 TSL 2 BASIC23.65■■□□□ 1.38
CNKSR3Q6P9H4 ABCC6-204ENST00000575728 714 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
CNKSR3Q6P9H4 AC005697.1-201ENST00000582441 582 ntAPPRIS P1 TSL 4 BASIC23.65■■□□□ 1.38
CNKSR3Q6P9H4 AC016888.1-201ENST00000585285 565 ntTSL 3 BASIC23.65■■□□□ 1.38
CNKSR3Q6P9H4 AC066615.1-201ENST00000640911 628 ntBASIC23.65■■□□□ 1.38
CNKSR3Q6P9H4 CREM-210ENST00000374721 2020 ntTSL 5 BASIC23.65■■□□□ 1.38
CNKSR3Q6P9H4 PIKFYVE-203ENST00000392202 2039 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
CNKSR3Q6P9H4 ADAP2-204ENST00000580525 1598 ntAPPRIS ALT2 TSL 1 (best) BASIC23.65■■□□□ 1.38
CNKSR3Q6P9H4 VDAC1-203ENST00000395047 1873 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.38
CNKSR3Q6P9H4 PPP1R14C-201ENST00000361131 2152 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.38
CNKSR3Q6P9H4 EPHA8-202ENST00000374644 1802 ntTSL 1 (best) BASIC23.64■■□□□ 1.38
CNKSR3Q6P9H4 CAPN10-204ENST00000354082 1999 ntTSL 1 (best) BASIC23.64■■□□□ 1.38
CNKSR3Q6P9H4 BRI3-207ENST00000539286 699 ntTSL 2 BASIC23.64■■□□□ 1.37
CNKSR3Q6P9H4 KLF13-207ENST00000560473 489 ntTSL 3 BASIC23.64■■□□□ 1.37
CNKSR3Q6P9H4 SNAP23-210ENST00000564153 775 ntTSL 2 BASIC23.64■■□□□ 1.37
CNKSR3Q6P9H4 PAQR4-205ENST00000576565 842 ntTSL 2 BASIC23.64■■□□□ 1.37
CNKSR3Q6P9H4 AP001160.3-201ENST00000601484 763 ntBASIC23.64■■□□□ 1.37
CNKSR3Q6P9H4 PFKL-212ENST00000628044 129 ntTSL 3 BASIC23.64■■□□□ 1.37
CNKSR3Q6P9H4 UNC119-202ENST00000335765 1424 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
CNKSR3Q6P9H4 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC23.64■■□□□ 1.37
CNKSR3Q6P9H4 CCDC151-202ENST00000586836 1867 ntTSL 2 BASIC23.64■■□□□ 1.37
CNKSR3Q6P9H4 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC23.64■■□□□ 1.37
CNKSR3Q6P9H4 GLT8D2-205ENST00000548660 1835 ntAPPRIS P1 TSL 2 BASIC23.63■■□□□ 1.37
CNKSR3Q6P9H4 HOMER2-201ENST00000304231 1990 ntAPPRIS P4 TSL 5 BASIC23.63■■□□□ 1.37
CNKSR3Q6P9H4 LRRC24-201ENST00000529415 1758 ntAPPRIS P2 TSL 1 (best) BASIC23.63■■□□□ 1.37
CNKSR3Q6P9H4 ARL5A-202ENST00000428992 747 ntTSL 2 BASIC23.63■■□□□ 1.37
CNKSR3Q6P9H4 ALDH16A1-203ENST00000540132 2174 ntTSL 2 BASIC23.63■■□□□ 1.37
CNKSR3Q6P9H4 RGMA-211ENST00000557420 989 ntTSL 3 BASIC23.63■■□□□ 1.37
CNKSR3Q6P9H4 IGFBP1-201ENST00000275525 1653 ntAPPRIS P2 TSL 1 (best) BASIC23.63■■□□□ 1.37
CNKSR3Q6P9H4 MFF-207ENST00000409565 1548 ntTSL 2 BASIC23.63■■□□□ 1.37
CNKSR3Q6P9H4 TMEM266-201ENST00000388942 2520 ntAPPRIS P1 TSL 5 BASIC23.63■■□□□ 1.37
CNKSR3Q6P9H4 H19-210ENST00000439725 1929 ntTSL 2 BASIC23.63■■□□□ 1.37
CNKSR3Q6P9H4 ASPSCR1-208ENST00000580534 1776 ntTSL 2 BASIC23.63■■□□□ 1.37
CNKSR3Q6P9H4 NKX2-5-201ENST00000329198 1709 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
CNKSR3Q6P9H4 AC096541.1-201ENST00000445070 1807 ntTSL 2 BASIC23.62■■□□□ 1.37
CNKSR3Q6P9H4 BHLHA15-201ENST00000314018 706 ntAPPRIS P1 BASIC23.62■■□□□ 1.37
CNKSR3Q6P9H4 CD8B-205ENST00000393761 932 ntTSL 1 (best) BASIC23.62■■□□□ 1.37
CNKSR3Q6P9H4 CT47A12-201ENST00000419982 1165 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
CNKSR3Q6P9H4 CD8B-206ENST00000431506 692 ntAPPRIS ALT2 TSL 5 BASIC23.62■■□□□ 1.37
CNKSR3Q6P9H4 NCAPD3-204ENST00000526422 1060 ntAPPRIS ALT2 TSL 2 BASIC23.62■■□□□ 1.37
CNKSR3Q6P9H4 SCO2-203ENST00000535425 1002 ntAPPRIS P1 TSL 2 BASIC23.62■■□□□ 1.37
CNKSR3Q6P9H4 BHLHA15-202ENST00000609256 796 ntAPPRIS P1 TSL 3 BASIC23.62■■□□□ 1.37
CNKSR3Q6P9H4 SLC35A3-218ENST00000639994 1114 ntTSL 5 BASIC23.62■■□□□ 1.37
CNKSR3Q6P9H4 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC23.62■■□□□ 1.37
CNKSR3Q6P9H4 RBM42-203ENST00000588161 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC23.62■■□□□ 1.37
CNKSR3Q6P9H4 ELOA3B-201ENST00000611323 1641 ntAPPRIS P1 BASIC23.62■■□□□ 1.37
CNKSR3Q6P9H4 ELOA3D-201ENST00000620881 1641 ntAPPRIS P1 BASIC23.62■■□□□ 1.37
CNKSR3Q6P9H4 VIL1-204ENST00000440053 1454 ntTSL 1 (best) BASIC23.62■■□□□ 1.37
CNKSR3Q6P9H4 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC23.61■■□□□ 1.37
CNKSR3Q6P9H4 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC23.61■■□□□ 1.37
CNKSR3Q6P9H4 CHPF-202ENST00000373891 1079 ntTSL 2 BASIC23.61■■□□□ 1.37
CNKSR3Q6P9H4 NOXO1-203ENST00000397280 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC23.61■■□□□ 1.37
CNKSR3Q6P9H4 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC23.61■■□□□ 1.37
CNKSR3Q6P9H4 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC23.61■■□□□ 1.37
CNKSR3Q6P9H4 MAGI2-211ENST00000535697 6146 ntTSL 5 BASIC23.61■■□□□ 1.37
CNKSR3Q6P9H4 AL139125.2-201ENST00000623134 1869 ntBASIC23.61■■□□□ 1.37
CNKSR3Q6P9H4 DECR2-201ENST00000219481 1615 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
CNKSR3Q6P9H4 AC004812.2-201ENST00000611079 2094 ntBASIC23.61■■□□□ 1.37
CNKSR3Q6P9H4 CREB3L3-202ENST00000595923 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC23.61■■□□□ 1.37
CNKSR3Q6P9H4 CERS4-205ENST00000558331 1803 ntTSL 5 BASIC23.61■■□□□ 1.37
CNKSR3Q6P9H4 LINC01124-201ENST00000409786 2117 ntBASIC23.6■■□□□ 1.37
CNKSR3Q6P9H4 KCNIP1-203ENST00000390656 2249 ntTSL 5 BASIC23.6■■□□□ 1.37
CNKSR3Q6P9H4 HRASLS5-201ENST00000301790 1166 ntAPPRIS P3 TSL 1 (best) BASIC23.6■■□□□ 1.37
CNKSR3Q6P9H4 GNB2-209ENST00000436220 1479 ntTSL 5 BASIC23.6■■□□□ 1.37
Retrieved 100 of 98,524 protein–RNA pairs in 21.3 ms