Protein–RNA interactions for Protein: Q6P9A3

ZNF549, Zinc finger protein 549, humanhuman

Predictions only

Length 640 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF549Q6P9A3 ILDR2-205ENST00000526687 2299 ntTSL 5 BASIC21.62■■□□□ 1.05
ZNF549Q6P9A3 MIR222HG-202ENST00000602507 1758 ntTSL 5 BASIC21.62■■□□□ 1.05
ZNF549Q6P9A3 ACYP1-205ENST00000555463 789 ntTSL 2 BASIC21.62■■□□□ 1.05
ZNF549Q6P9A3 AC092171.4-201ENST00000609130 632 ntBASIC21.62■■□□□ 1.05
ZNF549Q6P9A3 TMEM200B-201ENST00000420504 2553 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
ZNF549Q6P9A3 PELI3-201ENST00000320740 2740 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
ZNF549Q6P9A3 ZSWIM7-201ENST00000399277 2008 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
ZNF549Q6P9A3 FAM19A5-202ENST00000358295 2638 ntAPPRIS P1 TSL 2 BASIC21.61■■□□□ 1.05
ZNF549Q6P9A3 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
ZNF549Q6P9A3 STAP2-206ENST00000600324 1508 ntAPPRIS P3 TSL 2 BASIC21.61■■□□□ 1.05
ZNF549Q6P9A3 TDRKH-205ENST00000368827 2318 ntAPPRIS P2 TSL 1 (best) BASIC21.61■■□□□ 1.05
ZNF549Q6P9A3 IDI1-201ENST00000381344 2301 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
ZNF549Q6P9A3 PLPP7-202ENST00000372264 2095 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
ZNF549Q6P9A3 CLTB-201ENST00000310418 1215 ntAPPRIS P4 TSL 1 (best) BASIC21.61■■□□□ 1.05
ZNF549Q6P9A3 CLTB-202ENST00000345807 1161 ntAPPRIS ALT1 TSL 1 (best) BASIC21.61■■□□□ 1.05
ZNF549Q6P9A3 TRAF7-203ENST00000565383 799 ntTSL 5 BASIC21.61■■□□□ 1.05
ZNF549Q6P9A3 WISP2-203ENST00000372868 1600 ntAPPRIS P1 TSL 3 BASIC21.61■■□□□ 1.05
ZNF549Q6P9A3 TOP1MT-201ENST00000329245 1958 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
ZNF549Q6P9A3 RHOT1-205ENST00000545287 2516 ntAPPRIS P4 TSL 5 BASIC21.61■■□□□ 1.05
ZNF549Q6P9A3 MIS18A-201ENST00000290130 1575 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
ZNF549Q6P9A3 C2CD4B-201ENST00000380392 1579 ntAPPRIS P1 TSL 2 BASIC21.61■■□□□ 1.05
ZNF549Q6P9A3 KCNT1-201ENST00000263604 5245 ntAPPRIS ALT2 TSL 5 BASIC21.61■■□□□ 1.05
ZNF549Q6P9A3 AF117829.1-201ENST00000519655 1398 ntTSL 5 BASIC21.61■■□□□ 1.05
ZNF549Q6P9A3 WDR86-207ENST00000621812 1542 ntTSL 5 BASIC21.6■■□□□ 1.05
ZNF549Q6P9A3 RASGRP2-207ENST00000377497 2221 ntAPPRIS P2 TSL 1 (best) BASIC21.6■■□□□ 1.05
ZNF549Q6P9A3 PARD3-209ENST00000374790 5825 ntTSL 5 BASIC21.6■■□□□ 1.05
ZNF549Q6P9A3 TRADD-202ENST00000486556 1833 ntTSL 2 BASIC21.6■■□□□ 1.05
ZNF549Q6P9A3 HSD17B14-201ENST00000263278 1238 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
ZNF549Q6P9A3 PRICKLE4-201ENST00000394259 939 ntAPPRIS ALT2 TSL 5 BASIC21.6■■□□□ 1.05
ZNF549Q6P9A3 MPST-202ENST00000397225 2116 ntAPPRIS P1 TSL 2 BASIC21.6■■□□□ 1.05
ZNF549Q6P9A3 HES6-206ENST00000409574 738 ntTSL 2 BASIC21.6■■□□□ 1.05
ZNF549Q6P9A3 OR2I1P-207ENST00000453522 948 ntBASIC21.6■■□□□ 1.05
ZNF549Q6P9A3 AC084116.4-201ENST00000524320 484 ntTSL 2 BASIC21.6■■□□□ 1.05
ZNF549Q6P9A3 AC010525.1-201ENST00000585559 441 ntBASIC21.6■■□□□ 1.05
ZNF549Q6P9A3 ORAI1-202ENST00000617316 2138 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
ZNF549Q6P9A3 WRNIP1-203ENST00000380771 2595 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
ZNF549Q6P9A3 REPIN1-214ENST00000489432 2058 ntAPPRIS ALT2 TSL 2 BASIC21.6■■□□□ 1.05
ZNF549Q6P9A3 DUX4-203ENST00000565211 1710 ntAPPRIS P2 TSL 1 (best) BASIC21.6■■□□□ 1.05
ZNF549Q6P9A3 AQP6-201ENST00000315520 1398 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
ZNF549Q6P9A3 UCHL5-201ENST00000367448 1534 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
ZNF549Q6P9A3 GUSB-201ENST00000304895 2300 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
ZNF549Q6P9A3 MANEAL-203ENST00000397631 2327 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
ZNF549Q6P9A3 SLC29A1-207ENST00000393841 2485 ntAPPRIS P1 TSL 2 BASIC21.6■■□□□ 1.05
ZNF549Q6P9A3 BARX2-201ENST00000281437 1813 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
ZNF549Q6P9A3 CCDC166-201ENST00000542437 1320 ntAPPRIS P1 TSL 2 BASIC21.59■■□□□ 1.05
ZNF549Q6P9A3 ANKRD44-204ENST00000409919 1622 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
ZNF549Q6P9A3 S100A6-201ENST00000368719 665 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
ZNF549Q6P9A3 SENCR-201ENST00000526269 1298 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
ZNF549Q6P9A3 Z98883.1-202ENST00000635107 1289 ntTSL 5 BASIC21.59■■□□□ 1.05
ZNF549Q6P9A3 ACVRL1-201ENST00000388922 1971 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
ZNF549Q6P9A3 C11orf63-201ENST00000227349 3147 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
ZNF549Q6P9A3 EI24-211ENST00000534546 1544 ntTSL 2 BASIC21.59■■□□□ 1.05
ZNF549Q6P9A3 PRKAR1B-211ENST00000537384 2533 ntAPPRIS P1 TSL 5 BASIC21.59■■□□□ 1.05
ZNF549Q6P9A3 USP45-205ENST00000472914 1617 ntTSL 5 BASIC21.58■■□□□ 1.05
ZNF549Q6P9A3 SSUH2-217ENST00000544814 1636 ntAPPRIS ALT2 TSL 2 BASIC21.58■■□□□ 1.05
ZNF549Q6P9A3 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC21.58■■□□□ 1.05
ZNF549Q6P9A3 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC21.58■■□□□ 1.05
ZNF549Q6P9A3 SYT6-210ENST00000641643 1587 ntBASIC21.58■■□□□ 1.05
ZNF549Q6P9A3 BAZ1A-201ENST00000358716 5920 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
ZNF549Q6P9A3 CACNG8-201ENST00000270458 8747 ntAPPRIS ALT2 TSL 1 (best) BASIC21.58■■□□□ 1.05
ZNF549Q6P9A3 CRTC2-203ENST00000368633 2644 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
ZNF549Q6P9A3 KRTAP5-4-201ENST00000399682 1181 ntAPPRIS P5 BASIC21.58■■□□□ 1.05
ZNF549Q6P9A3 AC007448.3-201ENST00000585193 689 ntTSL 2 BASIC21.58■■□□□ 1.05
ZNF549Q6P9A3 LINC01632-201ENST00000615763 496 ntTSL 3 BASIC21.58■■□□□ 1.05
ZNF549Q6P9A3 PDLIM3-203ENST00000284771 1672 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
ZNF549Q6P9A3 IMPA2-201ENST00000269159 1534 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
ZNF549Q6P9A3 AL359710.1-201ENST00000427039 1544 ntTSL 2 BASIC21.58■■□□□ 1.04
ZNF549Q6P9A3 WWC2-AS2-201ENST00000578387 2183 ntBASIC21.58■■□□□ 1.04
ZNF549Q6P9A3 SARDH-203ENST00000371868 2266 ntTSL 2 BASIC21.58■■□□□ 1.04
ZNF549Q6P9A3 UBTF-213ENST00000533177 3011 ntTSL 5 BASIC21.58■■□□□ 1.04
ZNF549Q6P9A3 ANKRD28-201ENST00000399451 6564 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
ZNF549Q6P9A3 ARRDC1-AS1-201ENST00000371417 1409 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
ZNF549Q6P9A3 MXRA8-203ENST00000445648 2001 ntTSL 2 BASIC21.57■■□□□ 1.04
ZNF549Q6P9A3 AL136116.3-201ENST00000402907 1138 ntBASIC21.57■■□□□ 1.04
ZNF549Q6P9A3 AL138724.1-201ENST00000606771 1088 ntBASIC21.57■■□□□ 1.04
ZNF549Q6P9A3 DECR2-201ENST00000219481 1615 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
ZNF549Q6P9A3 FHL3-201ENST00000373016 1647 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
ZNF549Q6P9A3 FMNL2-201ENST00000288670 5575 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
ZNF549Q6P9A3 SLC12A5-AS1-202ENST00000535913 1957 ntTSL 2 BASIC21.57■■□□□ 1.04
ZNF549Q6P9A3 STARD3NL-202ENST00000396013 1365 ntAPPRIS P1 TSL 5 BASIC21.57■■□□□ 1.04
ZNF549Q6P9A3 ENKD1-206ENST00000602644 1353 ntTSL 5 BASIC21.57■■□□□ 1.04
ZNF549Q6P9A3 NEURL3-201ENST00000310865 1710 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
ZNF549Q6P9A3 WRNIP1-204ENST00000380773 2670 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
ZNF549Q6P9A3 EEF1D-201ENST00000317198 1458 ntAPPRIS ALT2 TSL 5 BASIC21.57■■□□□ 1.04
ZNF549Q6P9A3 RASGRP2-210ENST00000394430 2174 ntTSL 2 BASIC21.57■■□□□ 1.04
ZNF549Q6P9A3 IQCJ-SCHIP1-203ENST00000476809 1780 ntAPPRIS ALT2 TSL 5 BASIC21.56■■□□□ 1.04
ZNF549Q6P9A3 KCNK15-201ENST00000372861 2599 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
ZNF549Q6P9A3 CHADL-201ENST00000216241 2533 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
ZNF549Q6P9A3 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
ZNF549Q6P9A3 UBE2E2-203ENST00000425792 1248 ntAPPRIS P1 TSL 2 BASIC21.56■■□□□ 1.04
ZNF549Q6P9A3 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC21.56■■□□□ 1.04
ZNF549Q6P9A3 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC21.56■■□□□ 1.04
ZNF549Q6P9A3 DUX4L19-201ENST00000557448 1267 ntBASIC21.56■■□□□ 1.04
ZNF549Q6P9A3 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
ZNF549Q6P9A3 AC131212.1-201ENST00000613771 668 ntBASIC21.56■■□□□ 1.04
ZNF549Q6P9A3 SAP25-203ENST00000614631 987 ntAPPRIS P2 TSL 2 BASIC21.56■■□□□ 1.04
ZNF549Q6P9A3 AC091982.4-201ENST00000623943 726 ntTSL 2 BASIC21.56■■□□□ 1.04
ZNF549Q6P9A3 AC093762.1-201ENST00000641981 837 ntAPPRIS P1 BASIC21.56■■□□□ 1.04
ZNF549Q6P9A3 MAIP1-201ENST00000295079 1495 ntAPPRIS P2 TSL 2 BASIC21.56■■□□□ 1.04
ZNF549Q6P9A3 CDIPT-201ENST00000219789 2353 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Retrieved 100 of 98,524 protein–RNA pairs in 56.7 ms