Protein–RNA interactions for Protein: Q5VTA0

PRAMEF17, PRAME family member 17, humanhuman

Predictions only

Length 474 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEF17Q5VTA0 GLI4-201ENST00000340042 1341 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
PRAMEF17Q5VTA0 AVPR2-203ENST00000370049 1307 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
PRAMEF17Q5VTA0 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC20.74■□□□□ 0.91
PRAMEF17Q5VTA0 THRA-202ENST00000394121 2260 ntTSL 2 BASIC20.74■□□□□ 0.91
PRAMEF17Q5VTA0 DLL3-201ENST00000205143 2332 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
PRAMEF17Q5VTA0 SPATA22-214ENST00000575375 1374 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
PRAMEF17Q5VTA0 SRPK3-204ENST00000370108 1863 ntAPPRIS ALT2 TSL 5 BASIC20.73■□□□□ 0.91
PRAMEF17Q5VTA0 ZFAND4-205ENST00000374371 2283 ntTSL 5 BASIC20.73■□□□□ 0.91
PRAMEF17Q5VTA0 AC090377.1-201ENST00000585691 1762 ntTSL 3 BASIC20.73■□□□□ 0.91
PRAMEF17Q5VTA0 PHPT1-201ENST00000247665 890 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
PRAMEF17Q5VTA0 NECTIN2-202ENST00000252485 2112 ntAPPRIS P3 TSL 1 (best) BASIC20.73■□□□□ 0.91
PRAMEF17Q5VTA0 PPCS-202ENST00000372560 793 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
PRAMEF17Q5VTA0 CTNNAL1-202ENST00000374593 761 ntTSL 3 BASIC20.73■□□□□ 0.91
PRAMEF17Q5VTA0 ATE1-AS1-201ENST00000437593 951 ntTSL 2 BASIC20.73■□□□□ 0.91
PRAMEF17Q5VTA0 ZNF696-205ENST00000521537 705 ntTSL 2 BASIC20.73■□□□□ 0.91
PRAMEF17Q5VTA0 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC20.73■□□□□ 0.91
PRAMEF17Q5VTA0 ATP5G2-208ENST00000552242 1950 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
PRAMEF17Q5VTA0 CERS4-205ENST00000558331 1803 ntTSL 5 BASIC20.73■□□□□ 0.91
PRAMEF17Q5VTA0 MME-202ENST00000382989 1319 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
PRAMEF17Q5VTA0 PRSS29P-202ENST00000568091 1864 ntTSL 5 BASIC20.73■□□□□ 0.91
PRAMEF17Q5VTA0 FZD8-201ENST00000374694 4030 ntAPPRIS P1 BASIC20.73■□□□□ 0.91
PRAMEF17Q5VTA0 ZNF419-203ENST00000354197 1569 ntTSL 5 BASIC20.72■□□□□ 0.91
PRAMEF17Q5VTA0 ATP5G2-201ENST00000338662 1792 ntTSL 2 BASIC20.72■□□□□ 0.91
PRAMEF17Q5VTA0 USP36-218ENST00000590546 1771 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
PRAMEF17Q5VTA0 PICK1-202ENST00000404072 2164 ntAPPRIS P1 TSL 2 BASIC20.72■□□□□ 0.91
PRAMEF17Q5VTA0 CABLES1-201ENST00000256925 5002 ntAPPRIS P4 TSL 1 (best) BASIC20.72■□□□□ 0.91
PRAMEF17Q5VTA0 TMEM44-202ENST00000347147 2245 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
PRAMEF17Q5VTA0 UCN-201ENST00000296099 795 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
PRAMEF17Q5VTA0 PDCD5-204ENST00000586035 601 ntTSL 3 BASIC20.72■□□□□ 0.91
PRAMEF17Q5VTA0 TPRG1LP1-201ENST00000598702 760 ntBASIC20.72■□□□□ 0.91
PRAMEF17Q5VTA0 AC087239.1-201ENST00000622671 572 ntBASIC20.72■□□□□ 0.91
PRAMEF17Q5VTA0 AC092437.1-201ENST00000624794 1048 ntBASIC20.72■□□□□ 0.91
PRAMEF17Q5VTA0 AP001160.5-201ENST00000636508 485 ntAPPRIS P1 BASIC20.72■□□□□ 0.91
PRAMEF17Q5VTA0 TNFRSF11A-207ENST00000639222 855 ntAPPRIS ALT2 TSL 5 BASIC20.72■□□□□ 0.91
PRAMEF17Q5VTA0 MPND-202ENST00000359935 1475 ntAPPRIS ALT2 TSL 2 BASIC20.72■□□□□ 0.91
PRAMEF17Q5VTA0 RAB11FIP1-203ENST00000522727 1866 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
PRAMEF17Q5VTA0 IRX4-202ENST00000505790 2538 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
PRAMEF17Q5VTA0 GOLGA6L9-202ENST00000618348 1710 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
PRAMEF17Q5VTA0 OXCT2P1-201ENST00000447263 1535 ntBASIC20.72■□□□□ 0.91
PRAMEF17Q5VTA0 FAM136A-201ENST00000037869 1810 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
PRAMEF17Q5VTA0 TANGO2-201ENST00000327374 2273 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
PRAMEF17Q5VTA0 RASD1-202ENST00000579152 1404 ntTSL 2 BASIC20.71■□□□□ 0.91
PRAMEF17Q5VTA0 IGSF21-201ENST00000251296 1943 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
PRAMEF17Q5VTA0 TPSG1-201ENST00000234798 1108 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
PRAMEF17Q5VTA0 RASGRP2-203ENST00000377486 667 ntTSL 3 BASIC20.71■□□□□ 0.91
PRAMEF17Q5VTA0 NUDT14-202ENST00000392568 845 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
PRAMEF17Q5VTA0 GLI4-210ENST00000523522 1297 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
PRAMEF17Q5VTA0 LGI4-206ENST00000591633 1113 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
PRAMEF17Q5VTA0 NPY4R-201ENST00000374312 1956 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
PRAMEF17Q5VTA0 NPY4R2-201ENST00000576178 1956 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
PRAMEF17Q5VTA0 CACNB1-203ENST00000394310 1753 ntAPPRIS ALT1 TSL 1 (best) BASIC20.71■□□□□ 0.91
PRAMEF17Q5VTA0 RUNX2-210ENST00000576263 2256 ntTSL 5 BASIC20.71■□□□□ 0.91
PRAMEF17Q5VTA0 BRD3-202ENST00000371834 2529 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
PRAMEF17Q5VTA0 GBX2-201ENST00000306318 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
PRAMEF17Q5VTA0 PEBP1-201ENST00000261313 1697 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.91
PRAMEF17Q5VTA0 KCNQ5-205ENST00000370398 6345 ntAPPRIS P3 TSL 1 (best) BASIC20.7■□□□□ 0.9
PRAMEF17Q5VTA0 SYT6-209ENST00000610222 1707 ntAPPRIS P1 TSL 5 BASIC20.7■□□□□ 0.9
PRAMEF17Q5VTA0 BX005040.4-201ENST00000637145 1518 ntBASIC20.7■□□□□ 0.9
PRAMEF17Q5VTA0 C1QL1-201ENST00000253407 1295 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
PRAMEF17Q5VTA0 NXT1-201ENST00000254998 1123 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
PRAMEF17Q5VTA0 URAD-201ENST00000332715 931 ntAPPRIS P1 TSL 5 BASIC20.7■□□□□ 0.9
PRAMEF17Q5VTA0 PGAP3-204ENST00000429199 970 ntTSL 2 BASIC20.7■□□□□ 0.9
PRAMEF17Q5VTA0 GXYLT1P2-201ENST00000433312 1230 ntBASIC20.7■□□□□ 0.9
PRAMEF17Q5VTA0 KRT18P61-201ENST00000585825 1298 ntBASIC20.7■□□□□ 0.9
PRAMEF17Q5VTA0 UBE2Q2P2-204ENST00000618775 648 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
PRAMEF17Q5VTA0 DECR2-201ENST00000219481 1615 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
PRAMEF17Q5VTA0 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC20.7■□□□□ 0.9
PRAMEF17Q5VTA0 PCDH1-204ENST00000503492 2373 ntTSL 5 BASIC20.7■□□□□ 0.9
PRAMEF17Q5VTA0 AMZ2-202ENST00000359904 2402 ntAPPRIS P1 TSL 2 BASIC20.69■□□□□ 0.9
PRAMEF17Q5VTA0 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC20.69■□□□□ 0.9
PRAMEF17Q5VTA0 AC006455.5-202ENST00000615248 2284 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
PRAMEF17Q5VTA0 TESC-201ENST00000335209 1041 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
PRAMEF17Q5VTA0 PHLDA3-201ENST00000367309 896 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
PRAMEF17Q5VTA0 AC012313.1-203ENST00000597980 570 ntTSL 4 BASIC20.69■□□□□ 0.9
PRAMEF17Q5VTA0 OSCAR-201ENST00000284648 2055 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
PRAMEF17Q5VTA0 TALDO1-201ENST00000319006 1346 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
PRAMEF17Q5VTA0 HOXA4-201ENST00000360046 1747 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
PRAMEF17Q5VTA0 PHLDB3-207ENST00000599242 2286 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
PRAMEF17Q5VTA0 HSD11B1L-217ENST00000581521 1884 ntAPPRIS P3 TSL 5 BASIC20.69■□□□□ 0.9
PRAMEF17Q5VTA0 KREMEN2-204ENST00000572045 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
PRAMEF17Q5VTA0 CACTIN-AS1-201ENST00000592274 1913 ntTSL 2 BASIC20.68■□□□□ 0.9
PRAMEF17Q5VTA0 ZPBP2-201ENST00000348931 1543 ntAPPRIS P4 TSL 1 (best) BASIC20.68■□□□□ 0.9
PRAMEF17Q5VTA0 ADAP2-204ENST00000580525 1598 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
PRAMEF17Q5VTA0 DBP-201ENST00000222122 2229 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
PRAMEF17Q5VTA0 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC20.68■□□□□ 0.9
PRAMEF17Q5VTA0 ASL-203ENST00000380839 1765 ntTSL 5 BASIC20.68■□□□□ 0.9
PRAMEF17Q5VTA0 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC20.68■□□□□ 0.9
PRAMEF17Q5VTA0 ASMT-202ENST00000381233 989 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
PRAMEF17Q5VTA0 AC092675.2-201ENST00000413274 541 ntTSL 4 BASIC20.68■□□□□ 0.9
PRAMEF17Q5VTA0 SDHAP3-201ENST00000436493 736 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
PRAMEF17Q5VTA0 SLC35A3-213ENST00000638988 1286 ntTSL 5 BASIC20.68■□□□□ 0.9
PRAMEF17Q5VTA0 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
PRAMEF17Q5VTA0 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
PRAMEF17Q5VTA0 RAX2-202ENST00000555978 2145 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
PRAMEF17Q5VTA0 SAP30L-201ENST00000297109 6226 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
PRAMEF17Q5VTA0 FJX1-201ENST00000317811 2450 ntAPPRIS P1 BASIC20.67■□□□□ 0.9
PRAMEF17Q5VTA0 PGF-206ENST00000555567 1927 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
PRAMEF17Q5VTA0 VGLL4-208ENST00000424529 1025 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
PRAMEF17Q5VTA0 UTS2R-201ENST00000313135 1357 ntAPPRIS P1 BASIC20.67■□□□□ 0.9
PRAMEF17Q5VTA0 LYPLA1-201ENST00000316963 2585 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 36.3 ms