Protein–RNA interactions for Protein: Q5TAT6

COL13A1, Collagen alpha-1(XIII) chain, humanhuman

Predicted RBP Predictions only

Length 717 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1Q5TAT6 SLC47A1P1-201ENST00000420951 500 ntTSL 5 BASIC25.08■■□□□ 1.61
COL13A1Q5TAT6 LFNG-201ENST00000222725 2377 ntAPPRIS P4 TSL 5 BASIC25.08■■□□□ 1.6
COL13A1Q5TAT6 U2AF1-204ENST00000459639 1675 ntTSL 1 (best) BASIC25.07■■□□□ 1.6
COL13A1Q5TAT6 U2AF1L5-204ENST00000623375 1675 ntTSL 1 (best) BASIC25.07■■□□□ 1.6
COL13A1Q5TAT6 CYHR1-201ENST00000306145 1409 ntTSL 1 (best) BASIC25.07■■□□□ 1.6
COL13A1Q5TAT6 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC25.07■■□□□ 1.6
COL13A1Q5TAT6 TUSC3-209ENST00000509380 1266 ntTSL 5 BASIC25.07■■□□□ 1.6
COL13A1Q5TAT6 AC006435.1-201ENST00000571775 1065 ntTSL 5 BASIC25.07■■□□□ 1.6
COL13A1Q5TAT6 PLEKHJ1-205ENST00000587394 937 ntTSL 2 BASIC25.07■■□□□ 1.6
COL13A1Q5TAT6 TSPAN4-206ENST00000397408 1430 ntAPPRIS P1 TSL 2 BASIC25.06■■□□□ 1.6
COL13A1Q5TAT6 BST1-202ENST00000382346 1993 ntAPPRIS ALT2 TSL 5 BASIC25.06■■□□□ 1.6
COL13A1Q5TAT6 CERS2-201ENST00000271688 2544 ntAPPRIS P1 TSL 5 BASIC25.06■■□□□ 1.6
COL13A1Q5TAT6 SLC25A11-202ENST00000544061 952 ntTSL 3 BASIC25.06■■□□□ 1.6
COL13A1Q5TAT6 EMC10-202ENST00000376918 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC25.06■■□□□ 1.6
COL13A1Q5TAT6 CCDC24-201ENST00000372318 1463 ntAPPRIS P2 TSL 1 (best) BASIC25.06■■□□□ 1.6
COL13A1Q5TAT6 ZFAND6-224ENST00000618205 1659 ntAPPRIS P1 TSL 5 BASIC25.06■■□□□ 1.6
COL13A1Q5TAT6 TPRG1L-202ENST00000378344 2414 ntAPPRIS P1 TSL 2 BASIC25.06■■□□□ 1.6
COL13A1Q5TAT6 AC011511.4-201ENST00000586529 1850 ntAPPRIS P1 TSL 5 BASIC25.06■■□□□ 1.6
COL13A1Q5TAT6 LINC00092-201ENST00000412122 1726 ntTSL 1 (best) BASIC25.06■■□□□ 1.6
COL13A1Q5TAT6 TPSB2-203ENST00000612142 1352 ntAPPRIS P5 TSL 1 (best) BASIC25.05■■□□□ 1.6
COL13A1Q5TAT6 SDC3-202ENST00000339394 1580 ntAPPRIS P1 TSL 1 (best) BASIC25.05■■□□□ 1.6
COL13A1Q5TAT6 NRM-201ENST00000259953 1755 ntAPPRIS P2 TSL 2 BASIC25.05■■□□□ 1.6
COL13A1Q5TAT6 TESC-201ENST00000335209 1041 ntAPPRIS P1 TSL 1 (best) BASIC25.05■■□□□ 1.6
COL13A1Q5TAT6 CRAT-202ENST00000393384 973 ntTSL 2 BASIC25.05■■□□□ 1.6
COL13A1Q5TAT6 FBXL6-202ENST00000455319 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC25.05■■□□□ 1.6
COL13A1Q5TAT6 FAM58A-204ENST00000576892 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC25.05■■□□□ 1.6
COL13A1Q5TAT6 MBOAT7-202ENST00000338624 2076 ntTSL 2 BASIC25.05■■□□□ 1.6
COL13A1Q5TAT6 NKIRAS2-204ENST00000393880 1644 ntAPPRIS P1 TSL 2 BASIC25.04■■□□□ 1.6
COL13A1Q5TAT6 AC007743.1-203ENST00000447423 1623 ntTSL 2 BASIC25.04■■□□□ 1.6
COL13A1Q5TAT6 ZDHHC7-203ENST00000564466 1488 ntTSL 5 BASIC25.04■■□□□ 1.6
COL13A1Q5TAT6 TTC3-225ENST00000540756 2025 ntTSL 2 BASIC25.04■■□□□ 1.6
COL13A1Q5TAT6 USF2-203ENST00000379134 648 ntTSL 1 (best) BASIC25.04■■□□□ 1.6
COL13A1Q5TAT6 REXO2-216ENST00000544196 452 ntTSL 3 BASIC25.04■■□□□ 1.6
COL13A1Q5TAT6 AC073912.1-201ENST00000546264 587 ntTSL 3 BASIC25.04■■□□□ 1.6
COL13A1Q5TAT6 LINC02256-201ENST00000561999 366 ntTSL 3 BASIC25.04■■□□□ 1.6
COL13A1Q5TAT6 NOXO1-205ENST00000566005 1144 ntTSL 1 (best) BASIC25.04■■□□□ 1.6
COL13A1Q5TAT6 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC25.04■■□□□ 1.6
COL13A1Q5TAT6 AC020911.2-202ENST00000588945 593 ntTSL 3 BASIC25.04■■□□□ 1.6
COL13A1Q5TAT6 PTENP1-AS-201ENST00000627688 873 ntTSL 5 BASIC25.04■■□□□ 1.6
COL13A1Q5TAT6 AC008694.1-202ENST00000636953 945 ntBASIC25.04■■□□□ 1.6
COL13A1Q5TAT6 AC064853.5-201ENST00000641976 258 ntAPPRIS P1 BASIC25.04■■□□□ 1.6
COL13A1Q5TAT6 C18orf21-205ENST00000592875 1581 ntAPPRIS P1 TSL 1 (best) BASIC25.04■■□□□ 1.6
COL13A1Q5TAT6 MREG-201ENST00000263268 1314 ntAPPRIS P1 TSL 2 BASIC25.04■■□□□ 1.6
COL13A1Q5TAT6 UCK2-201ENST00000367879 1375 ntAPPRIS P1 TSL 1 (best) BASIC25.04■■□□□ 1.6
COL13A1Q5TAT6 RUNDC3A-201ENST00000225441 1821 ntTSL 1 (best) BASIC25.03■■□□□ 1.6
COL13A1Q5TAT6 DLK2-202ENST00000372485 1572 ntAPPRIS ALT1 TSL 5 BASIC25.03■■□□□ 1.6
COL13A1Q5TAT6 PHPT1-201ENST00000247665 890 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
COL13A1Q5TAT6 AZIN1-AS1-215ENST00000522939 644 ntTSL 2 BASIC25.03■■□□□ 1.6
COL13A1Q5TAT6 AC140504.1-202ENST00000568222 652 ntTSL 5 BASIC25.03■■□□□ 1.6
COL13A1Q5TAT6 HMCES-204ENST00000502878 1952 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
COL13A1Q5TAT6 AZIN2-204ENST00000373443 2048 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
COL13A1Q5TAT6 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC25.03■■□□□ 1.6
COL13A1Q5TAT6 FAM212A-201ENST00000333323 1040 ntAPPRIS P1 TSL 1 (best) BASIC25.02■■□□□ 1.6
COL13A1Q5TAT6 RABL2A-202ENST00000393165 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC25.02■■□□□ 1.6
COL13A1Q5TAT6 AC136628.4-201ENST00000520758 535 ntTSL 2 BASIC25.02■■□□□ 1.6
COL13A1Q5TAT6 RN7SL471P-201ENST00000580476 299 ntBASIC25.02■■□□□ 1.6
COL13A1Q5TAT6 JOSD2-205ENST00000601423 802 ntAPPRIS P1 TSL 1 (best) BASIC25.02■■□□□ 1.6
COL13A1Q5TAT6 ABHD17C-202ENST00000558464 1976 ntTSL 1 (best) BASIC25.02■■□□□ 1.6
COL13A1Q5TAT6 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC25.01■■□□□ 1.59
COL13A1Q5TAT6 FSD1-204ENST00000597590 1634 ntTSL 5 BASIC25.01■■□□□ 1.59
COL13A1Q5TAT6 KAT8-202ENST00000448516 1789 ntTSL 1 (best) BASIC25.01■■□□□ 1.59
COL13A1Q5TAT6 RPS14-201ENST00000312037 711 ntAPPRIS P1 TSL 1 (best) BASIC25.01■■□□□ 1.59
COL13A1Q5TAT6 LYPD1-201ENST00000345008 1033 ntTSL 1 (best) BASIC25.01■■□□□ 1.59
COL13A1Q5TAT6 UBE2C-206ENST00000405520 641 ntTSL 2 BASIC25.01■■□□□ 1.59
COL13A1Q5TAT6 AL035541.1-201ENST00000424850 823 ntTSL 2 BASIC25.01■■□□□ 1.59
COL13A1Q5TAT6 AL596442.1-201ENST00000429305 429 ntTSL 2 BASIC25.01■■□□□ 1.59
COL13A1Q5TAT6 AC004080.6-201ENST00000467897 919 ntTSL 5 BASIC25.01■■□□□ 1.59
COL13A1Q5TAT6 NPM2-204ENST00000518119 1190 ntAPPRIS P2 TSL 1 (best) BASIC25.01■■□□□ 1.59
COL13A1Q5TAT6 PRKACA-209ENST00000590853 1101 ntTSL 5 BASIC25.01■■□□□ 1.59
COL13A1Q5TAT6 UBE2C-208ENST00000617055 705 ntTSL 3 BASIC25.01■■□□□ 1.59
COL13A1Q5TAT6 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC25.01■■□□□ 1.59
COL13A1Q5TAT6 CNN3-202ENST00000394202 1974 ntTSL 2 BASIC25.01■■□□□ 1.59
COL13A1Q5TAT6 STEAP1-201ENST00000297205 1313 ntAPPRIS P1 TSL 1 (best) BASIC25.01■■□□□ 1.59
COL13A1Q5TAT6 PLEKHF1-204ENST00000592810 1357 ntAPPRIS P1 TSL 1 (best) BASIC25.01■■□□□ 1.59
COL13A1Q5TAT6 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC25.01■■□□□ 1.59
COL13A1Q5TAT6 RBMXL2-201ENST00000306904 1874 ntAPPRIS P1 BASIC25■■□□□ 1.59
COL13A1Q5TAT6 RHBDD2-202ENST00000318622 1878 ntTSL 2 BASIC25■■□□□ 1.59
COL13A1Q5TAT6 WDR74-201ENST00000278856 1289 ntAPPRIS P1 TSL 1 (best) BASIC25■■□□□ 1.59
COL13A1Q5TAT6 CEACAM3-201ENST00000344550 1022 ntAPPRIS ALT2 TSL 1 (best) BASIC25■■□□□ 1.59
COL13A1Q5TAT6 C16orf86-201ENST00000403458 1267 ntAPPRIS P2 TSL 1 (best) BASIC25■■□□□ 1.59
COL13A1Q5TAT6 SMG1P1-207ENST00000446662 852 ntTSL 5 BASIC25■■□□□ 1.59
COL13A1Q5TAT6 AC233702.5-201ENST00000584107 538 ntBASIC25■■□□□ 1.59
COL13A1Q5TAT6 GDF6-203ENST00000621429 1179 ntTSL 5 BASIC25■■□□□ 1.59
COL13A1Q5TAT6 NDUFA8-201ENST00000373768 844 ntAPPRIS P1 TSL 1 (best) BASIC24.99■■□□□ 1.59
COL13A1Q5TAT6 OGG1-209ENST00000383826 1069 ntTSL 5 BASIC24.99■■□□□ 1.59
COL13A1Q5TAT6 AL117348.2-201ENST00000432920 1625 ntAPPRIS P1 TSL 2 BASIC24.99■■□□□ 1.59
COL13A1Q5TAT6 CDH23-208ENST00000461841 2000 ntTSL 5 BASIC24.99■■□□□ 1.59
COL13A1Q5TAT6 PTTG1-205ENST00000520452 895 ntAPPRIS P1 TSL 3 BASIC24.99■■□□□ 1.59
COL13A1Q5TAT6 NME3-204ENST00000563498 920 ntTSL 2 BASIC24.99■■□□□ 1.59
COL13A1Q5TAT6 AC092865.7-201ENST00000641832 219 ntBASIC24.99■■□□□ 1.59
COL13A1Q5TAT6 OSCAR-207ENST00000391761 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC24.98■■□□□ 1.59
COL13A1Q5TAT6 FAM118A-205ENST00000441876 1776 ntAPPRIS P1 TSL 1 (best) BASIC24.98■■□□□ 1.59
COL13A1Q5TAT6 AC012618.2-201ENST00000428058 849 ntBASIC24.98■■□□□ 1.59
COL13A1Q5TAT6 NUDT22-204ENST00000441250 986 ntAPPRIS ALT2 TSL 5 BASIC24.98■■□□□ 1.59
COL13A1Q5TAT6 TERF1P5-201ENST00000477545 1207 ntBASIC24.98■■□□□ 1.59
COL13A1Q5TAT6 AC026412.1-201ENST00000507290 1033 ntTSL 1 (best) BASIC24.98■■□□□ 1.59
COL13A1Q5TAT6 AC126696.3-202ENST00000570159 553 ntTSL 5 BASIC24.98■■□□□ 1.59
COL13A1Q5TAT6 AC069236.1-201ENST00000604339 616 ntBASIC24.98■■□□□ 1.59
COL13A1Q5TAT6 PHF23-201ENST00000320316 2037 ntAPPRIS P1 TSL 1 (best) BASIC24.98■■□□□ 1.59
COL13A1Q5TAT6 BABAM1-213ENST00000601043 1366 ntAPPRIS P3 TSL 2 BASIC24.97■■□□□ 1.59
Retrieved 100 of 98,524 protein–RNA pairs in 22.1 ms