Protein–RNA interactions for Protein: P62312

LSM6, U6 snRNA-associated Sm-like protein LSm6, humanhuman

Known RBP Predictions only

Length 80 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6P62312 FRAT1-201ENST00000371021 2649 ntAPPRIS P1 BASIC19.12■□□□□ 0.65
LSM6P62312 P4HA2-202ENST00000360568 2313 ntAPPRIS ALT1 TSL 1 (best) BASIC19.12■□□□□ 0.65
LSM6P62312 SNX21-212ENST00000491381 1607 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
LSM6P62312 CCNG2-204ENST00000502280 1459 ntAPPRIS P1 TSL 2 BASIC19.12■□□□□ 0.65
LSM6P62312 ENKD1-206ENST00000602644 1353 ntTSL 5 BASIC19.12■□□□□ 0.65
LSM6P62312 TMEM165-204ENST00000506198 828 ntTSL 2 BASIC19.12■□□□□ 0.65
LSM6P62312 AC079089.2-201ENST00000531211 1277 ntBASIC19.12■□□□□ 0.65
LSM6P62312 CCER2-201ENST00000571838 1057 ntAPPRIS P2 TSL 5 BASIC19.12■□□□□ 0.65
LSM6P62312 AC131212.1-201ENST00000613771 668 ntBASIC19.12■□□□□ 0.65
LSM6P62312 PLEKHA8-208ENST00000622102 2140 ntTSL 5 BASIC19.12■□□□□ 0.65
LSM6P62312 NEIL1-206ENST00000564784 2019 ntAPPRIS P1 TSL 2 BASIC19.12■□□□□ 0.65
LSM6P62312 C6orf136-201ENST00000293604 1978 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
LSM6P62312 IQCJ-SCHIP1-203ENST00000476809 1780 ntAPPRIS ALT2 TSL 5 BASIC19.11■□□□□ 0.65
LSM6P62312 NOX4-209ENST00000527626 1774 ntTSL 2 BASIC19.11■□□□□ 0.65
LSM6P62312 IMPA2-201ENST00000269159 1534 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
LSM6P62312 CLN6-201ENST00000249806 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
LSM6P62312 AP1S1-201ENST00000337619 1306 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
LSM6P62312 PYGO2-201ENST00000368456 1306 ntTSL 2 BASIC19.11■□□□□ 0.65
LSM6P62312 YJEFN3-201ENST00000436027 878 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
LSM6P62312 AC004707.1-201ENST00000511627 715 ntTSL 3 BASIC19.11■□□□□ 0.65
LSM6P62312 AC007448.3-201ENST00000585193 689 ntTSL 2 BASIC19.11■□□□□ 0.65
LSM6P62312 KCNAB3-201ENST00000303790 2458 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
LSM6P62312 HTATIP2-204ENST00000451739 1748 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
LSM6P62312 FAM72A-202ENST00000367128 2398 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
LSM6P62312 FAM72D-201ENST00000400889 2397 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
LSM6P62312 LINC00565-201ENST00000562710 2331 ntBASIC19.11■□□□□ 0.65
LSM6P62312 FHL3-201ENST00000373016 1647 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
LSM6P62312 PLPP7-202ENST00000372264 2095 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
LSM6P62312 ADCK2-203ENST00000476491 2092 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
LSM6P62312 MAIP1-201ENST00000295079 1495 ntAPPRIS P2 TSL 2 BASIC19.1■□□□□ 0.65
LSM6P62312 U2AF2-202ENST00000450554 3022 ntAPPRIS ALT1 TSL 1 (best) BASIC19.1■□□□□ 0.65
LSM6P62312 MYL5-208ENST00000511290 781 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
LSM6P62312 B3GALT6-201ENST00000379198 2777 ntAPPRIS P1 BASIC19.1■□□□□ 0.65
LSM6P62312 P4HA3-202ENST00000427714 2248 ntTSL 2 BASIC19.1■□□□□ 0.65
LSM6P62312 NKX6-2-201ENST00000368592 2673 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
LSM6P62312 OSBPL5-208ENST00000478260 2653 ntTSL 2 BASIC19.1■□□□□ 0.65
LSM6P62312 AC133065.2-201ENST00000573379 2147 ntTSL 2 BASIC19.1■□□□□ 0.65
LSM6P62312 HOMER1-202ENST00000334082 5881 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
LSM6P62312 DECR2-201ENST00000219481 1615 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
LSM6P62312 PPT2-244ENST00000324816 2053 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
LSM6P62312 ZSWIM7-201ENST00000399277 2008 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
LSM6P62312 AC009506.1-201ENST00000418474 1494 ntTSL 2 BASIC19.09■□□□□ 0.65
LSM6P62312 ST3GAL4-215ENST00000532243 1825 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
LSM6P62312 FOXJ1-201ENST00000322957 2641 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
LSM6P62312 TSKS-202ENST00000358830 1367 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
LSM6P62312 SLC25A42-201ENST00000318596 3120 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
LSM6P62312 REXO1-201ENST00000170168 4591 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
LSM6P62312 HYI-204ENST00000372432 1066 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
LSM6P62312 MAST4-205ENST00000406039 717 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
LSM6P62312 AC010141.3-201ENST00000456659 717 ntBASIC19.09■□□□□ 0.65
LSM6P62312 TGFBR3L-202ENST00000565886 1260 ntAPPRIS P1 TSL 5 BASIC19.09■□□□□ 0.65
LSM6P62312 RPRD1A-207ENST00000588737 1264 ntTSL 2 BASIC19.09■□□□□ 0.65
LSM6P62312 NOXO1-201ENST00000354249 1618 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
LSM6P62312 PARD3-209ENST00000374790 5825 ntTSL 5 BASIC19.09■□□□□ 0.65
LSM6P62312 INPP1-201ENST00000322522 1919 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
LSM6P62312 UCHL5-201ENST00000367448 1534 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
LSM6P62312 BARX2-201ENST00000281437 1813 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
LSM6P62312 ANKHD1-205ENST00000394723 2135 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
LSM6P62312 PLPP5-203ENST00000424479 2130 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
LSM6P62312 FAM120B-204ENST00000625626 1794 ntAPPRIS ALT2 TSL 2 BASIC19.09■□□□□ 0.65
LSM6P62312 TERF2-201ENST00000254942 2983 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
LSM6P62312 P2RX5-201ENST00000225328 2309 ntAPPRIS P3 TSL 1 (best) BASIC19.08■□□□□ 0.65
LSM6P62312 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
LSM6P62312 PDLIM3-203ENST00000284771 1672 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
LSM6P62312 NIPA2-203ENST00000398013 2280 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
LSM6P62312 OLIG2-202ENST00000382357 2578 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
LSM6P62312 ACP4-201ENST00000270593 1347 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
LSM6P62312 AC010525.1-201ENST00000585559 441 ntBASIC19.08■□□□□ 0.64
LSM6P62312 AC004980.1-201ENST00000418663 2667 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
LSM6P62312 KCNQ5-208ENST00000414165 6236 ntTSL 5 BASIC19.08■□□□□ 0.64
LSM6P62312 SMOX-212ENST00000621355 2322 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
LSM6P62312 PRKAA1-202ENST00000354209 1918 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
LSM6P62312 BIN1-202ENST00000316724 2693 ntAPPRIS P4 TSL 1 (best) BASIC19.08■□□□□ 0.64
LSM6P62312 ZBTB22-208ENST00000431845 2651 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
LSM6P62312 SEPT8-207ENST00000378719 2889 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
LSM6P62312 REPIN1-214ENST00000489432 2058 ntAPPRIS ALT2 TSL 2 BASIC19.07■□□□□ 0.64
LSM6P62312 UCHL5-205ENST00000367454 1815 ntAPPRIS ALT1 TSL 1 (best) BASIC19.07■□□□□ 0.64
LSM6P62312 C12orf75-208ENST00000612117 1329 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
LSM6P62312 BCS1L-210ENST00000431802 2015 ntAPPRIS P1 TSL 2 BASIC19.07■□□□□ 0.64
LSM6P62312 SLC12A5-AS1-202ENST00000535913 1957 ntTSL 2 BASIC19.07■□□□□ 0.64
LSM6P62312 DCTPP1-201ENST00000319285 1222 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
LSM6P62312 LYPD2-201ENST00000359228 594 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
LSM6P62312 AP005435.1-201ENST00000529293 1178 ntBASIC19.07■□□□□ 0.64
LSM6P62312 RAB6A-204ENST00000536566 1267 ntTSL 5 BASIC19.07■□□□□ 0.64
LSM6P62312 PLEKHJ1-213ENST00000591099 1092 ntTSL 2 BASIC19.07■□□□□ 0.64
LSM6P62312 NEURL3-201ENST00000310865 1710 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
LSM6P62312 AC074143.1-203ENST00000518227 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
LSM6P62312 AKT2-210ENST00000424901 5170 ntTSL 5 BASIC19.07■□□□□ 0.64
LSM6P62312 HMGA2-205ENST00000425208 1444 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
LSM6P62312 SNCB-206ENST00000614675 1407 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
LSM6P62312 AMER2-202ENST00000515384 3197 ntAPPRIS P1 BASIC19.07■□□□□ 0.64
LSM6P62312 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
LSM6P62312 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC19.06■□□□□ 0.64
LSM6P62312 STARD3NL-202ENST00000396013 1365 ntAPPRIS P1 TSL 5 BASIC19.06■□□□□ 0.64
LSM6P62312 MAGIX-207ENST00000615915 1757 ntAPPRIS ALT2 TSL 2 BASIC19.06■□□□□ 0.64
LSM6P62312 DCTD-201ENST00000357067 1931 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
LSM6P62312 MPST-202ENST00000397225 2116 ntAPPRIS P1 TSL 2 BASIC19.06■□□□□ 0.64
LSM6P62312 PYCARD-202ENST00000350605 696 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
LSM6P62312 STOX1-202ENST00000399162 935 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
LSM6P62312 STOX1-203ENST00000399165 1135 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 29 ms