Protein–RNA interactions for Protein: P56748

CLDN8, Claudin-8, humanhuman

Predictions only

Length 225 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN8P56748 FNDC11-204ENST00000615526 2954 ntAPPRIS P1 BASIC20.7■□□□□ 0.9
CLDN8P56748 FAM185A-201ENST00000409231 1446 ntAPPRIS ALT2 TSL 2 BASIC20.7■□□□□ 0.9
CLDN8P56748 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC20.7■□□□□ 0.9
CLDN8P56748 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC20.7■□□□□ 0.9
CLDN8P56748 A1BG-201ENST00000263100 1722 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CLDN8P56748 MALT1-201ENST00000345724 2866 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
CLDN8P56748 BARX2-201ENST00000281437 1813 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CLDN8P56748 KRT16P3-201ENST00000439127 1283 ntBASIC20.7■□□□□ 0.9
CLDN8P56748 AK3-203ENST00000447596 705 ntTSL 2 BASIC20.7■□□□□ 0.9
CLDN8P56748 SLC25A39-203ENST00000537904 1274 ntTSL 2 BASIC20.7■□□□□ 0.9
CLDN8P56748 AL031602.1-201ENST00000633169 911 ntBASIC20.7■□□□□ 0.9
CLDN8P56748 DISC1-205ENST00000366636 2224 ntAPPRIS P4 TSL 1 (best) BASIC20.7■□□□□ 0.9
CLDN8P56748 RASGRP2-207ENST00000377497 2221 ntAPPRIS P2 TSL 1 (best) BASIC20.7■□□□□ 0.9
CLDN8P56748 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
CLDN8P56748 AL137060.1-201ENST00000618151 2648 ntBASIC20.7■□□□□ 0.9
CLDN8P56748 AC133637.1-201ENST00000624115 1537 ntBASIC20.69■□□□□ 0.9
CLDN8P56748 KCNQ5-208ENST00000414165 6236 ntTSL 5 BASIC20.69■□□□□ 0.9
CLDN8P56748 AKT2-210ENST00000424901 5170 ntTSL 5 BASIC20.69■□□□□ 0.9
CLDN8P56748 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC20.69■□□□□ 0.9
CLDN8P56748 BAALC-205ENST00000438105 2662 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
CLDN8P56748 GCH1-206ENST00000543643 1897 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
CLDN8P56748 SELENOO-201ENST00000380903 2315 ntAPPRIS P2 TSL 1 (best) BASIC20.69■□□□□ 0.9
CLDN8P56748 SELENOO-203ENST00000611222 2311 ntAPPRIS ALT2 TSL 5 BASIC20.69■□□□□ 0.9
CLDN8P56748 PGRMC2-201ENST00000296425 2767 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CLDN8P56748 ZNF669-201ENST00000343381 1951 ntAPPRIS P3 TSL 1 (best) BASIC20.68■□□□□ 0.9
CLDN8P56748 GOLGA2P6-201ENST00000340929 2049 ntBASIC20.68■□□□□ 0.9
CLDN8P56748 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC20.68■□□□□ 0.9
CLDN8P56748 TMEM259-202ENST00000356663 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
CLDN8P56748 SYNGR2-201ENST00000225777 2325 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CLDN8P56748 AC026310.3-201ENST00000625186 2373 ntBASIC20.68■□□□□ 0.9
CLDN8P56748 GFRA3-201ENST00000274721 2039 ntAPPRIS P2 TSL 1 (best) BASIC20.68■□□□□ 0.9
CLDN8P56748 PEX7-201ENST00000318471 1464 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CLDN8P56748 SPAST-204ENST00000621856 1715 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
CLDN8P56748 NABP2-203ENST00000380198 1775 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CLDN8P56748 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CLDN8P56748 OAZ2-201ENST00000326005 1934 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
CLDN8P56748 TFG-201ENST00000240851 1978 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
CLDN8P56748 NFS1-204ENST00000397425 1956 ntTSL 5 BASIC20.67■□□□□ 0.9
CLDN8P56748 SNRK-203ENST00000437827 1995 ntTSL 2 BASIC20.67■□□□□ 0.9
CLDN8P56748 C18orf8-214ENST00000615148 1958 ntTSL 5 BASIC20.67■□□□□ 0.9
CLDN8P56748 ACYP1-205ENST00000555463 789 ntTSL 2 BASIC20.67■□□□□ 0.9
CLDN8P56748 pRNA.6-201ENST00000610482 90 ntBASIC20.67■□□□□ 0.9
CLDN8P56748 pRNA.5-201ENST00000612139 90 ntBASIC20.67■□□□□ 0.9
CLDN8P56748 pRNA.11-201ENST00000618423 90 ntBASIC20.67■□□□□ 0.9
CLDN8P56748 pRNA.13-201ENST00000619112 90 ntBASIC20.67■□□□□ 0.9
CLDN8P56748 GLRX3-201ENST00000331244 1302 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CLDN8P56748 PABPC1L2A-201ENST00000373519 2237 ntAPPRIS P1 BASIC20.67■□□□□ 0.9
CLDN8P56748 LOXL1-AS1-210ENST00000567257 2358 ntTSL 2 BASIC20.67■□□□□ 0.9
CLDN8P56748 AC074143.1-203ENST00000518227 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
CLDN8P56748 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
CLDN8P56748 TSPAN3-202ENST00000346495 1647 ntTSL 2 BASIC20.67■□□□□ 0.9
CLDN8P56748 C1orf174-201ENST00000361605 1666 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CLDN8P56748 ST3GAL4-201ENST00000227495 1790 ntAPPRIS P3 TSL 5 BASIC20.67■□□□□ 0.9
CLDN8P56748 PDK3-201ENST00000379162 1809 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CLDN8P56748 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CLDN8P56748 IPO9-AS1-201ENST00000413035 839 ntTSL 3 BASIC20.66■□□□□ 0.9
CLDN8P56748 AC006455.2-201ENST00000429931 906 ntBASIC20.66■□□□□ 0.9
CLDN8P56748 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC20.66■□□□□ 0.9
CLDN8P56748 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC20.66■□□□□ 0.9
CLDN8P56748 PRSS21-201ENST00000005995 1101 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CLDN8P56748 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CLDN8P56748 CD6-203ENST00000352009 1809 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
CLDN8P56748 USP48-205ENST00000421625 2818 ntTSL 2 BASIC20.65■□□□□ 0.9
CLDN8P56748 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC20.65■□□□□ 0.9
CLDN8P56748 SPIRE2-202ENST00000393062 2172 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
CLDN8P56748 FBXO27-202ENST00000509137 2130 ntAPPRIS P2 TSL 1 (best) BASIC20.65■□□□□ 0.9
CLDN8P56748 SOX18-201ENST00000340356 1864 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CLDN8P56748 AC244015.2-201ENST00000616358 1861 ntBASIC20.65■□□□□ 0.9
CLDN8P56748 CBWD6-213ENST00000613716 1820 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
CLDN8P56748 IGFBP1-202ENST00000457280 1601 ntAPPRIS ALT2 TSL 5 BASIC20.65■□□□□ 0.9
CLDN8P56748 USP45-205ENST00000472914 1617 ntTSL 5 BASIC20.65■□□□□ 0.9
CLDN8P56748 FAM167A-204ENST00000528897 1620 ntAPPRIS P1 TSL 2 BASIC20.65■□□□□ 0.9
CLDN8P56748 RCE1-202ENST00000524506 1379 ntTSL 5 BASIC20.65■□□□□ 0.9
CLDN8P56748 TMEM54-201ENST00000329151 871 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
CLDN8P56748 MEIS1-AS3-201ENST00000454167 707 ntTSL 4 BASIC20.65■□□□□ 0.9
CLDN8P56748 DTWD2-204ENST00000515439 1275 ntTSL 5 BASIC20.65■□□□□ 0.9
CLDN8P56748 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC20.65■□□□□ 0.9
CLDN8P56748 AC079089.2-201ENST00000531211 1277 ntBASIC20.65■□□□□ 0.9
CLDN8P56748 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC20.65■□□□□ 0.9
CLDN8P56748 AL356740.2-201ENST00000601559 647 ntBASIC20.65■□□□□ 0.9
CLDN8P56748 ZEB1-AS1-205ENST00000605946 382 ntTSL 5 BASIC20.65■□□□□ 0.9
CLDN8P56748 TUBBP5-204ENST00000635438 565 ntTSL 4 BASIC20.65■□□□□ 0.9
CLDN8P56748 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CLDN8P56748 ZIM2-201ENST00000593711 2083 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CLDN8P56748 ALDH5A1-204ENST00000491546 1699 ntTSL 5 BASIC20.64■□□□□ 0.9
CLDN8P56748 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
CLDN8P56748 MAIP1-201ENST00000295079 1495 ntAPPRIS P2 TSL 2 BASIC20.64■□□□□ 0.89
CLDN8P56748 DNAJB11-202ENST00000439351 2398 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
CLDN8P56748 PDXK-205ENST00000398081 2251 ntTSL 2 BASIC20.64■□□□□ 0.89
CLDN8P56748 LGALS9B-201ENST00000324290 1243 ntAPPRIS P2 TSL 5 BASIC20.64■□□□□ 0.89
CLDN8P56748 IGFBP3-202ENST00000381083 1050 ntAPPRIS ALT1 TSL 5 BASIC20.64■□□□□ 0.89
CLDN8P56748 MYD88-205ENST00000424893 1279 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
CLDN8P56748 ZNF302-211ENST00000509528 577 ntTSL 4 BASIC20.64■□□□□ 0.89
CLDN8P56748 AC084116.4-201ENST00000524320 484 ntTSL 2 BASIC20.64■□□□□ 0.89
CLDN8P56748 AC099791.2-201ENST00000605725 427 ntBASIC20.64■□□□□ 0.89
CLDN8P56748 SPHK1-202ENST00000392496 1779 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.89
CLDN8P56748 NKX2-5-201ENST00000329198 1709 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
CLDN8P56748 GATM-206ENST00000558336 1522 ntTSL 2 BASIC20.63■□□□□ 0.89
CLDN8P56748 STX4-202ENST00000394998 1498 ntTSL 2 BASIC20.63■□□□□ 0.89
CLDN8P56748 AP1S1-201ENST00000337619 1306 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 46.8 ms