Protein–RNA interactions for Protein: P53836

CAF120, CCR4-NOT transcriptional complex subunit CAF120, yeastyeast

Predictions only

Length 1,060 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
CAF120P53836 YLR227W-AYLR227W-A 1323 nt5.99□□□□□ -1.45
CAF120P53836 YLR256W-AYLR256W-A 1323 nt5.99□□□□□ -1.45
CAF120P53836 YML040WYML040W 1323 nt5.99□□□□□ -1.45
CAF120P53836 YML045W-AYML045W-A 1323 nt5.99□□□□□ -1.45
CAF120P53836 YMR051CYMR051C 1323 nt5.99□□□□□ -1.45
CAF120P53836 YNL054W-AYNL054W-A 1323 nt5.99□□□□□ -1.45
CAF120P53836 YPL257W-AYPL257W-A 1323 nt5.99□□□□□ -1.45
CAF120P53836 YPR137C-AYPR137C-A 1323 nt5.99□□□□□ -1.45
CAF120P53836 YPR158C-CYPR158C-C 1323 nt5.99□□□□□ -1.45
CAF120P53836 PUF3YLL013C 2640 nt5.98□□□□□ -1.45
CAF120P53836 SKN1YGR143W 2316 nt5.98□□□□□ -1.45
CAF120P53836 GPT2YKR067W 2232 nt5.98□□□□□ -1.45
CAF120P53836 GRX3YDR098C 858 nt5.98□□□□□ -1.45
CAF120P53836 PUG1YER185W 912 nt5.98□□□□□ -1.45
CAF120P53836 RMR1YGL250W 726 nt5.98□□□□□ -1.45
CAF120P53836 YHR063W-AYHR063W-A 336 nt5.98□□□□□ -1.45
CAF120P53836 YIL014C-AYIL014C-A 315 nt5.98□□□□□ -1.45
CAF120P53836 HIT1YJR055W 495 nt5.98□□□□□ -1.45
CAF120P53836 ARC18YLR370C 537 nt5.98□□□□□ -1.45
CAF120P53836 RRT16YNL105W 429 nt5.98□□□□□ -1.45
CAF120P53836 snR41snR41 95 nt5.98□□□□□ -1.45
CAF120P53836 PYC2YBR218C 3543 nt5.98□□□□□ -1.45
CAF120P53836 UBX2YML013W 1755 nt5.98□□□□□ -1.45
CAF120P53836 SPC97YHR172W 2472 nt5.98□□□□□ -1.45
CAF120P53836 YFL002W-BYFL002W-B 1317 nt5.98□□□□□ -1.45
CAF120P53836 YGR161W-AYGR161W-A 1317 nt5.98□□□□□ -1.45
CAF120P53836 YBL100W-AYBL100W-A 1317 nt5.98□□□□□ -1.45
CAF120P53836 YCL020WYCL020W 1317 nt5.98□□□□□ -1.45
CAF120P53836 PAT1YCR077C 2391 nt5.98□□□□□ -1.45
CAF120P53836 FAA4YMR246W 2085 nt5.97□□□□□ -1.45
CAF120P53836 ADY2YCR010C 852 nt5.97□□□□□ -1.45
CAF120P53836 RMT2YDR465C 1239 nt5.97□□□□□ -1.45
CAF120P53836 COX13YGL191W 390 nt5.97□□□□□ -1.45
CAF120P53836 FRA2YGL220W 363 nt5.97□□□□□ -1.45
CAF120P53836 YHR070C-AYHR070C-A 411 nt5.97□□□□□ -1.45
CAF120P53836 RPL16AYIL133C 600 nt5.97□□□□□ -1.45
CAF120P53836 YJR087WYJR087W 351 nt5.97□□□□□ -1.45
CAF120P53836 NHA1YLR138W 2958 nt5.97□□□□□ -1.45
CAF120P53836 CGI121YML036W 546 nt5.97□□□□□ -1.45
CAF120P53836 DSS4YPR017C 432 nt5.97□□□□□ -1.45
CAF120P53836 MRPL27YBR282W 441 nt5.97□□□□□ -1.45
CAF120P53836 PFK2YMR205C 2880 nt5.97□□□□□ -1.45
CAF120P53836 YMR1YJR110W 2067 nt5.97□□□□□ -1.45
CAF120P53836 HXT3YDR345C 1704 nt5.96□□□□□ -1.45
CAF120P53836 NOP2YNL061W 1857 nt5.96□□□□□ -1.45
CAF120P53836 TPO3YPR156C 1869 nt5.96□□□□□ -1.45
CAF120P53836 VNX1YNL321W 2727 nt5.96□□□□□ -1.46
CAF120P53836 YCL075WYCL075W 441 nt5.96□□□□□ -1.46
CAF120P53836 ARP2YDL029W 1176 nt5.96□□□□□ -1.46
CAF120P53836 RRP45YDR280W 918 nt5.96□□□□□ -1.46
CAF120P53836 IZH1YDR492W 951 nt5.96□□□□□ -1.46
CAF120P53836 YER034WYER034W 558 nt5.96□□□□□ -1.46
CAF120P53836 YPT35YHR105W 645 nt5.96□□□□□ -1.46
CAF120P53836 SYN8YAL014C 768 nt5.96□□□□□ -1.46
CAF120P53836 BLI1YKL061W 342 nt5.96□□□□□ -1.46
CAF120P53836 ECM4YKR076W 1113 nt5.96□□□□□ -1.46
CAF120P53836 RAD33YML011C 534 nt5.96□□□□□ -1.46
CAF120P53836 YML012C-AYML012C-A 378 nt5.96□□□□□ -1.46
CAF120P53836 UBX4YMR067C 1251 nt5.96□□□□□ -1.46
CAF120P53836 YNR075C-AYNR075C-A 93 nt5.96□□□□□ -1.46
CAF120P53836 GCY1YOR120W 939 nt5.96□□□□□ -1.46
CAF120P53836 YPL073CYPL073C 486 nt5.96□□□□□ -1.46
CAF120P53836 ATG12YBR217W 561 nt5.96□□□□□ -1.46
CAF120P53836 CIT1YNR001C 1440 nt5.96□□□□□ -1.46
CAF120P53836 PRT1YOR361C 2292 nt5.96□□□□□ -1.46
CAF120P53836 YRB30YGL164C 1323 nt5.96□□□□□ -1.46
CAF120P53836 GAS5YOL030W 1455 nt5.96□□□□□ -1.46
CAF120P53836 MRK1YDL079C 1506 nt5.95□□□□□ -1.46
CAF120P53836 ATE1YGL017W 1512 nt5.95□□□□□ -1.46
CAF120P53836 QNS1YHR074W 2145 nt5.95□□□□□ -1.46
CAF120P53836 YDL022C-AYDL022C-A 249 nt5.95□□□□□ -1.46
CAF120P53836 GPI19YDR437W 423 nt5.95□□□□□ -1.46
CAF120P53836 EFM4YIL064W 774 nt5.95□□□□□ -1.46
CAF120P53836 SUC2YIL162W 1599 nt5.95□□□□□ -1.46
CAF120P53836 CIS3YJL158C 684 nt5.95□□□□□ -1.46
CAF120P53836 IMA5YJL216C 1746 nt5.95□□□□□ -1.46
CAF120P53836 YJR037WYJR037W 384 nt5.95□□□□□ -1.46
CAF120P53836 MSN4YKL062W 1893 nt5.95□□□□□ -1.46
CAF120P53836 BRX1YOL077C 876 nt5.95□□□□□ -1.46
CAF120P53836 AFT2YPL202C 1251 nt5.95□□□□□ -1.46
CAF120P53836 MSS18YPR134W 807 nt5.95□□□□□ -1.46
CAF120P53836 MRPS5YBR251W 924 nt5.95□□□□□ -1.46
CAF120P53836 RMD9YGL107C 1941 nt5.95□□□□□ -1.46
CAF120P53836 ALG6YOR002W 1635 nt5.95□□□□□ -1.46
CAF120P53836 YTP1YNL237W 1380 nt5.94□□□□□ -1.46
CAF120P53836 PGS1YCL004W 1566 nt5.94□□□□□ -1.46
CAF120P53836 SDT1YGL224C 843 nt5.94□□□□□ -1.46
CAF120P53836 MRP17YKL003C 396 nt5.94□□□□□ -1.46
CAF120P53836 ERG3YLR056W 1098 nt5.94□□□□□ -1.46
CAF120P53836 YLR224WYLR224W 1110 nt5.94□□□□□ -1.46
CAF120P53836 YOR053WYOR053W 342 nt5.94□□□□□ -1.46
CAF120P53836 CAR1YPL111W 1002 nt5.94□□□□□ -1.46
CAF120P53836 SSO1YPL232W 873 nt5.94□□□□□ -1.46
CAF120P53836 OPY1YBR129C 987 nt5.94□□□□□ -1.46
CAF120P53836 EAR1YMR171C 1653 nt5.94□□□□□ -1.46
CAF120P53836 PSY4YBL046W 1326 nt5.94□□□□□ -1.46
CAF120P53836 STE12YHR084W 2067 nt5.94□□□□□ -1.46
CAF120P53836 SDS23YGL056C 1584 nt5.93□□□□□ -1.46
CAF120P53836 IML2YJL082W 2196 nt5.93□□□□□ -1.46
CAF120P53836 AZR1YGR224W 1842 nt5.93□□□□□ -1.46
Retrieved 100 of 7,029 protein–RNA pairs in 25.7 ms