Protein–RNA interactions for Protein: P35900

KRT20, Keratin, type I cytoskeletal 20, humanhuman

Predictions only

Length 424 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT20P35900 CCDC189-211ENST00000545825 1046 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
KRT20P35900 DUX4L19-201ENST00000557448 1267 ntBASIC20.57■□□□□ 0.88
KRT20P35900 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC20.57■□□□□ 0.88
KRT20P35900 HOXA11-AS1_1.1-201ENST00000613939 98 ntBASIC20.57■□□□□ 0.88
KRT20P35900 GRAMD1B-217ENST00000640939 1212 ntTSL 5 BASIC20.57■□□□□ 0.88
KRT20P35900 NAE1-202ENST00000359087 1825 ntTSL 2 BASIC20.57■□□□□ 0.88
KRT20P35900 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC20.57■□□□□ 0.88
KRT20P35900 DNAJB11-202ENST00000439351 2398 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
KRT20P35900 BRWD1-202ENST00000341322 2495 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
KRT20P35900 NPHS2-201ENST00000367615 1855 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
KRT20P35900 BAALC-205ENST00000438105 2662 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
KRT20P35900 RHOT1-205ENST00000545287 2516 ntAPPRIS P4 TSL 5 BASIC20.56■□□□□ 0.88
KRT20P35900 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
KRT20P35900 MRGPRF-AS1-203ENST00000569432 542 ntTSL 4 BASIC20.56■□□□□ 0.88
KRT20P35900 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC20.56■□□□□ 0.88
KRT20P35900 WDR86-208ENST00000628331 1905 ntTSL 5 BASIC20.56■□□□□ 0.88
KRT20P35900 EGR3-203ENST00000519492 1500 ntTSL 5 BASIC20.56■□□□□ 0.88
KRT20P35900 PSPH-202ENST00000395471 2178 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
KRT20P35900 SOAT2-201ENST00000301466 2044 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
KRT20P35900 ZNF784-201ENST00000325351 2021 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
KRT20P35900 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC20.56■□□□□ 0.88
KRT20P35900 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC20.56■□□□□ 0.88
KRT20P35900 PRSS29P-202ENST00000568091 1864 ntTSL 5 BASIC20.56■□□□□ 0.88
KRT20P35900 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC20.56■□□□□ 0.88
KRT20P35900 ACVRL1-201ENST00000388922 1971 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
KRT20P35900 GPSM1-204ENST00000429455 2057 ntTSL 3 BASIC20.55■□□□□ 0.88
KRT20P35900 ZC3H14-219ENST00000556945 2075 ntTSL 5 BASIC20.55■□□□□ 0.88
KRT20P35900 MTCH2-201ENST00000302503 2587 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
KRT20P35900 TNKS2-201ENST00000371627 6157 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
KRT20P35900 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC20.55■□□□□ 0.88
KRT20P35900 GCA-201ENST00000233612 1694 ntTSL 2 BASIC20.55■□□□□ 0.88
KRT20P35900 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
KRT20P35900 KRTAP5-4-201ENST00000399682 1181 ntAPPRIS P5 BASIC20.55■□□□□ 0.88
KRT20P35900 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
KRT20P35900 LY6H-205ENST00000615409 980 ntAPPRIS P3 TSL 1 (best) BASIC20.55■□□□□ 0.88
KRT20P35900 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC20.55■□□□□ 0.88
KRT20P35900 ADCK2-203ENST00000476491 2092 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
KRT20P35900 FAM66C-208ENST00000541558 2087 ntTSL 2 BASIC20.55■□□□□ 0.88
KRT20P35900 SPINT2-201ENST00000301244 1802 ntAPPRIS P2 TSL 1 (best) BASIC20.55■□□□□ 0.88
KRT20P35900 DMPK-220ENST00000618091 2503 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
KRT20P35900 ADAD2-201ENST00000268624 2283 ntAPPRIS P3 TSL 2 BASIC20.55■□□□□ 0.88
KRT20P35900 CCDC38-201ENST00000344280 2277 ntAPPRIS P2 TSL 1 (best) BASIC20.55■□□□□ 0.88
KRT20P35900 GRK4-201ENST00000345167 2013 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
KRT20P35900 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
KRT20P35900 PCP4L1-201ENST00000504449 1424 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
KRT20P35900 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
KRT20P35900 ASCC1-204ENST00000394915 1510 ntTSL 5 BASIC20.54■□□□□ 0.88
KRT20P35900 AP006623.1-201ENST00000506172 2061 ntTSL 5 BASIC20.54■□□□□ 0.88
KRT20P35900 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC20.54■□□□□ 0.88
KRT20P35900 TMEM80-201ENST00000397510 1094 ntAPPRIS P2 TSL 5 BASIC20.54■□□□□ 0.88
KRT20P35900 PEMT-206ENST00000435340 960 ntTSL 5 BASIC20.54■□□□□ 0.88
KRT20P35900 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC20.54■□□□□ 0.88
KRT20P35900 EEF1D-201ENST00000317198 1458 ntAPPRIS ALT2 TSL 5 BASIC20.54■□□□□ 0.88
KRT20P35900 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC20.54■□□□□ 0.88
KRT20P35900 ASPSCR1-208ENST00000580534 1776 ntTSL 2 BASIC20.54■□□□□ 0.88
KRT20P35900 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC20.54■□□□□ 0.88
KRT20P35900 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
KRT20P35900 FDFT1-201ENST00000220584 2176 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
KRT20P35900 DYRK1B-204ENST00000593685 2724 ntAPPRIS P3 TSL 5 BASIC20.53■□□□□ 0.88
KRT20P35900 CLYBL-202ENST00000376354 1127 ntTSL 5 BASIC20.53■□□□□ 0.88
KRT20P35900 SYT6-210ENST00000641643 1587 ntBASIC20.53■□□□□ 0.88
KRT20P35900 C1QTNF4-201ENST00000302514 1664 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
KRT20P35900 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC20.53■□□□□ 0.88
KRT20P35900 AC005906.2-202ENST00000638821 2168 ntTSL 5 BASIC20.53■□□□□ 0.88
KRT20P35900 ANO8-201ENST00000159087 4152 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
KRT20P35900 AC011498.4-201ENST00000586020 1803 ntAPPRIS P1 TSL 2 BASIC20.53■□□□□ 0.88
KRT20P35900 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
KRT20P35900 MEIS2-207ENST00000557796 2666 ntTSL 5 BASIC20.52■□□□□ 0.88
KRT20P35900 SLC12A5-AS1-202ENST00000535913 1957 ntTSL 2 BASIC20.52■□□□□ 0.88
KRT20P35900 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC20.52■□□□□ 0.88
KRT20P35900 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC20.52■□□□□ 0.88
KRT20P35900 ARHGDIA-217ENST00000584461 886 ntTSL 2 BASIC20.52■□□□□ 0.88
KRT20P35900 AC091982.4-201ENST00000623943 726 ntTSL 2 BASIC20.52■□□□□ 0.88
KRT20P35900 SHISA9-205ENST00000639941 1135 ntAPPRIS ALT2 TSL 5 BASIC20.52■□□□□ 0.88
KRT20P35900 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC20.52■□□□□ 0.88
KRT20P35900 GPRC5B-210ENST00000569847 1830 ntAPPRIS P2 TSL 2 BASIC20.52■□□□□ 0.88
KRT20P35900 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC20.52■□□□□ 0.88
KRT20P35900 COG8-201ENST00000562081 1731 ntAPPRIS P1 TSL 5 BASIC20.52■□□□□ 0.88
KRT20P35900 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
KRT20P35900 JAGN1-201ENST00000307768 1693 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
KRT20P35900 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC20.51■□□□□ 0.87
KRT20P35900 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC20.51■□□□□ 0.87
KRT20P35900 IER2-201ENST00000292433 2085 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
KRT20P35900 CARD19-201ENST00000375464 855 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
KRT20P35900 MLF2-206ENST00000539187 1110 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
KRT20P35900 RPRD1A-207ENST00000588737 1264 ntTSL 2 BASIC20.51■□□□□ 0.87
KRT20P35900 ANAPC4-201ENST00000315368 2685 ntAPPRIS P3 TSL 1 (best) BASIC20.51■□□□□ 0.87
KRT20P35900 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC20.51■□□□□ 0.87
KRT20P35900 ESRRAP2-201ENST00000418437 1549 ntBASIC20.51■□□□□ 0.87
KRT20P35900 E2F1-201ENST00000343380 2503 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
KRT20P35900 PACRGL-201ENST00000295290 1937 ntTSL 5 BASIC20.51■□□□□ 0.87
KRT20P35900 C14orf80-201ENST00000329886 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
KRT20P35900 SLC22A31-201ENST00000562855 1909 ntAPPRIS P1 TSL 5 BASIC20.51■□□□□ 0.87
KRT20P35900 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC20.5■□□□□ 0.87
KRT20P35900 RSPO1-201ENST00000356545 2621 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
KRT20P35900 RBPJL-202ENST00000372741 1636 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
KRT20P35900 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC20.5■□□□□ 0.87
KRT20P35900 C11orf91-201ENST00000379011 811 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
KRT20P35900 AL122058.1-201ENST00000412321 1166 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
KRT20P35900 WDR86-AS1-204ENST00000489632 751 ntTSL 3 BASIC20.5■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 15.3 ms