Protein–RNA interactions for Protein: P32588

PUB1, Nuclear and cytoplasmic polyadenylated RNA-binding protein PUB1, yeastyeast

Known RBP RIP-Chip data

Length 453 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
PUB1P32588 snR41snR41 95 nt5.11□□□□□ -1.59
PUB1P32588 ADE12YNL220W 1302 nt5.11□□□□□ -1.59 RIP-Chip
PUB1P32588 SNU56YDR240C 1479 nt5.11□□□□□ -1.59 RIP-Chip
PUB1P32588 AMD1YML035C 2433 nt5.11□□□□□ -1.59
PUB1P32588 YDL023CYDL023C 321 nt5.1□□□□□ -1.59
PUB1P32588 UBC9YDL064W 474 nt5.1□□□□□ -1.59 RIP-Chip
PUB1P32588 YER145C-AYER145C-A 438 nt5.1□□□□□ -1.59
PUB1P32588 SUC2YIL162W 1599 nt5.1□□□□□ -1.59 RIP-Chip
PUB1P32588 YJR037WYJR037W 384 nt5.1□□□□□ -1.59
PUB1P32588 CUZ1YNL155W 825 nt5.1□□□□□ -1.59
PUB1P32588 TCM62YBR044C 1719 nt5.1□□□□□ -1.59
PUB1P32588 DSS4YPR017C 432 nt5.1□□□□□ -1.59
PUB1P32588 RFA1YAR007C 1866 nt5.09□□□□□ -1.59
PUB1P32588 RRP3YHR065C 1506 nt5.09□□□□□ -1.59
PUB1P32588 DUR1,2YBR208C 5508 nt5.09□□□□□ -1.59
PUB1P32588 SLF1YDR515W 1344 nt5.09□□□□□ -1.59
PUB1P32588 AAD3YCR107W 1092 nt5.09□□□□□ -1.59
PUB1P32588 RRP42YDL111C 798 nt5.09□□□□□ -1.59
PUB1P32588 UBC13YDR092W 462 nt5.09□□□□□ -1.59
PUB1P32588 YGR039WYGR039W 312 nt5.09□□□□□ -1.59
PUB1P32588 YBL010CYBL010C 843 nt5.09□□□□□ -1.59
PUB1P32588 YMR087WYMR087W 855 nt5.09□□□□□ -1.59
PUB1P32588 YMR254CYMR254C 309 nt5.09□□□□□ -1.59
PUB1P32588 RPS9AYPL081W 594 nt5.09□□□□□ -1.59
PUB1P32588 YPL197CYPL197C 414 nt5.09□□□□□ -1.59
PUB1P32588 YBR124WYBR124W 360 nt5.09□□□□□ -1.59
PUB1P32588 STP22YCL008C 1158 nt5.09□□□□□ -1.59 RIP-Chip
PUB1P32588 IXR1YKL032C 1794 nt5.09□□□□□ -1.6 RIP-Chip
PUB1P32588 DAD1YDR016C 285 nt5.08□□□□□ -1.6
PUB1P32588 FIN1YDR130C 876 nt5.08□□□□□ -1.6
PUB1P32588 CWC21YDR482C 408 nt5.08□□□□□ -1.6
PUB1P32588 IZH1YDR492W 951 nt5.08□□□□□ -1.6 RIP-Chip
PUB1P32588 YGR073CYGR073C 372 nt5.08□□□□□ -1.6
PUB1P32588 PEX21YGR239C 867 nt5.08□□□□□ -1.6
PUB1P32588 ADI1YMR009W 540 nt5.08□□□□□ -1.6 RIP-Chip
PUB1P32588 YOL159CYOL159C 516 nt5.08□□□□□ -1.6
PUB1P32588 YPL088WYPL088W 1029 nt5.08□□□□□ -1.6
PUB1P32588 PBN1YCL052C 1251 nt5.08□□□□□ -1.6
PUB1P32588 IMA3YIL172C 1770 nt5.08□□□□□ -1.6
PUB1P32588 IMA4YJL221C 1770 nt5.08□□□□□ -1.6
PUB1P32588 MNS1YJR131W 1650 nt5.08□□□□□ -1.6
PUB1P32588 PXL1YKR090W 2121 nt5.08□□□□□ -1.6
PUB1P32588 DAS1YJL149W 1992 nt5.07□□□□□ -1.6
PUB1P32588 LSG1YGL099W 1923 nt5.07□□□□□ -1.6
PUB1P32588 FET3YMR058W 1911 nt5.07□□□□□ -1.6 RIP-Chip
PUB1P32588 YER097WYER097W 330 nt5.07□□□□□ -1.6
PUB1P32588 LSB1YGR136W 726 nt5.07□□□□□ -1.6
PUB1P32588 EGD2YHR193C 525 nt5.07□□□□□ -1.6
PUB1P32588 YIL077CYIL077C 963 nt5.07□□□□□ -1.6 RIP-Chip
PUB1P32588 YAL068W-AYAL068W-A 255 nt5.07□□□□□ -1.6
PUB1P32588 YLR125WYLR125W 411 nt5.07□□□□□ -1.6
PUB1P32588 YMR130WYMR130W 909 nt5.07□□□□□ -1.6
PUB1P32588 YSF3YNL138W-A 258 nt5.07□□□□□ -1.6
PUB1P32588 RPA49YNL248C 1248 nt5.07□□□□□ -1.6
PUB1P32588 RPS15YOL040C 429 nt5.07□□□□□ -1.6 RIP-Chip
PUB1P32588 SVS1YPL163C 783 nt5.07□□□□□ -1.6
PUB1P32588 HPF1YOL155C 2904 nt5.07□□□□□ -1.6
PUB1P32588 PDH1YPR002W 1551 nt5.07□□□□□ -1.6
PUB1P32588 CHK1YBR274W 1584 nt5.07□□□□□ -1.6
PUB1P32588 CDC37YDR168W 1521 nt5.07□□□□□ -1.6
PUB1P32588 BAP2YBR068C 1830 nt5.07□□□□□ -1.6 RIP-Chip
PUB1P32588 MAL12YGR292W 1755 nt5.06□□□□□ -1.6
PUB1P32588 MAL32YBR299W 1755 nt5.06□□□□□ -1.6
PUB1P32588 BNA5YLR231C 1362 nt5.06□□□□□ -1.6
PUB1P32588 CUE2YKL090W 1332 nt5.06□□□□□ -1.6
PUB1P32588 RIM1YCR028C-A 408 nt5.06□□□□□ -1.6 RIP-Chip
PUB1P32588 YCR064CYCR064C 411 nt5.06□□□□□ -1.6
PUB1P32588 YDL240C-AYDL240C-A 138 nt5.06□□□□□ -1.6
PUB1P32588 YIL021C-AYIL021C-A 270 nt5.06□□□□□ -1.6
PUB1P32588 GCD14YJL125C 1152 nt5.06□□□□□ -1.6
PUB1P32588 SRP40YKR092C 1221 nt5.06□□□□□ -1.6
PUB1P32588 SDO1YLR022C 753 nt5.06□□□□□ -1.6
PUB1P32588 YLR126CYLR126C 756 nt5.06□□□□□ -1.6 RIP-Chip
PUB1P32588 SHP1YBL058W 1272 nt5.06□□□□□ -1.6
PUB1P32588 GCY1YOR120W 939 nt5.06□□□□□ -1.6 RIP-Chip
PUB1P32588 YPL225WYPL225W 441 nt5.06□□□□□ -1.6
PUB1P32588 HSP104YLL026W 2727 nt5.06□□□□□ -1.6
PUB1P32588 PHR1YOR386W 1698 nt5.05□□□□□ -1.6
PUB1P32588 YFL002W-BYFL002W-B 1317 nt5.05□□□□□ -1.6
PUB1P32588 YGR161W-AYGR161W-A 1317 nt5.05□□□□□ -1.6
PUB1P32588 GAL80YML051W 1308 nt5.05□□□□□ -1.6
PUB1P32588 YBL100W-AYBL100W-A 1317 nt5.05□□□□□ -1.6
PUB1P32588 YCL020WYCL020W 1317 nt5.05□□□□□ -1.6
PUB1P32588 YCL075WYCL075W 441 nt5.05□□□□□ -1.6
PUB1P32588 YDR053WYDR053W 396 nt5.05□□□□□ -1.6
PUB1P32588 LOC1YFR001W 615 nt5.05□□□□□ -1.6
PUB1P32588 COX13YGL191W 390 nt5.05□□□□□ -1.6 RIP-Chip
PUB1P32588 NAT2YGR147C 867 nt5.05□□□□□ -1.6
PUB1P32588 YPT35YHR105W 645 nt5.05□□□□□ -1.6
PUB1P32588 CAP2YIL034C 864 nt5.05□□□□□ -1.6
PUB1P32588 RPL16AYIL133C 600 nt5.05□□□□□ -1.6
PUB1P32588 YAP5YIR018W 738 nt5.05□□□□□ -1.6 RIP-Chip
PUB1P32588 MET14YKL001C 609 nt5.05□□□□□ -1.6
PUB1P32588 YLR171WYLR171W 390 nt5.05□□□□□ -1.6
PUB1P32588 CWC27YPL064C 906 nt5.05□□□□□ -1.6
PUB1P32588 BUL1YMR275C 2931 nt5.05□□□□□ -1.6
PUB1P32588 RSC2YLR357W 2670 nt5.05□□□□□ -1.6
PUB1P32588 QNS1YHR074W 2145 nt5.05□□□□□ -1.6
PUB1P32588 UTP18YJL069C 1785 nt5.04□□□□□ -1.6
PUB1P32588 ALT2YDR111C 1524 nt5.04□□□□□ -1.6 RIP-Chip
Retrieved 100 of 7,029 protein–RNA pairs in 18.9 ms