Protein–RNA interactions for Protein: P25942

CD40, Tumor necrosis factor receptor superfamily member 5, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD40P25942 TALDO1-201ENST00000319006 1346 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CD40P25942 TMCC2-209ENST00000637895 1455 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
CD40P25942 TPSG1-201ENST00000234798 1108 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CD40P25942 PHLDA3-201ENST00000367309 896 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
CD40P25942 PPCS-202ENST00000372560 793 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
CD40P25942 NUDT14-202ENST00000392568 845 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CD40P25942 SDHAP3-201ENST00000436493 736 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
CD40P25942 H2AFB3-201ENST00000615853 591 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
CD40P25942 MMD-201ENST00000262065 2735 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CD40P25942 RAX2-202ENST00000555978 2145 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CD40P25942 ZFAND4-205ENST00000374371 2283 ntTSL 5 BASIC18.8■□□□□ 0.6
CD40P25942 ADAP2-204ENST00000580525 1598 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
CD40P25942 CDYL-203ENST00000397588 2184 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CD40P25942 PRR7-201ENST00000323249 1480 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CD40P25942 KLC1-201ENST00000246489 2294 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
CD40P25942 BIN1-210ENST00000393041 2272 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
CD40P25942 KLC1-224ENST00000557450 2265 ntTSL 5 BASIC18.79■□□□□ 0.6
CD40P25942 INPP1-201ENST00000322522 1919 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CD40P25942 GZMM-201ENST00000264553 940 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CD40P25942 GP9-201ENST00000307395 889 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CD40P25942 KRTAP17-1-201ENST00000334202 779 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
CD40P25942 BASP1-203ENST00000616743 1711 ntAPPRIS P1 TSL 3 BASIC18.79■□□□□ 0.6
CD40P25942 MPST-205ENST00000404802 1453 ntAPPRIS P1 TSL 3 BASIC18.78■□□□□ 0.6
CD40P25942 FMR1-AS1-201ENST00000594922 2005 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
CD40P25942 SAXO1-201ENST00000380530 1727 ntAPPRIS ALT2 TSL 2 BASIC18.78■□□□□ 0.6
CD40P25942 SHD-201ENST00000543264 2577 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CD40P25942 AC012313.1-204ENST00000444227 462 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
CD40P25942 ARHGAP24-206ENST00000503995 1273 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
CD40P25942 NTF6G-201ENST00000591094 616 ntBASIC18.78■□□□□ 0.6
CD40P25942 NPY4R-201ENST00000374312 1956 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CD40P25942 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CD40P25942 NPY4R2-201ENST00000576178 1956 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CD40P25942 MFSD7-203ENST00000404286 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
CD40P25942 OSCAR-201ENST00000284648 2055 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
CD40P25942 PGF-206ENST00000555567 1927 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
CD40P25942 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CD40P25942 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC18.78■□□□□ 0.6
CD40P25942 MAIP1-201ENST00000295079 1495 ntAPPRIS P2 TSL 2 BASIC18.77■□□□□ 0.6
CD40P25942 GOLGA6L9-202ENST00000618348 1710 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
CD40P25942 NFE2L3P1-201ENST00000588207 1959 ntBASIC18.77■□□□□ 0.6
CD40P25942 MBOAT7-205ENST00000431666 2471 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
CD40P25942 STK32C-201ENST00000298630 2086 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CD40P25942 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC18.77■□□□□ 0.6
CD40P25942 GABBR2-201ENST00000259455 5788 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CD40P25942 KRTAP5-2-201ENST00000412090 1118 ntAPPRIS P1 BASIC18.77■□□□□ 0.6
CD40P25942 VGLL4-208ENST00000424529 1025 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
CD40P25942 BRD2-214ENST00000496118 735 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
CD40P25942 YJEFN3-203ENST00000514277 995 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
CD40P25942 AL137779.2-201ENST00000554859 448 ntTSL 2 BASIC18.77■□□□□ 0.6
CD40P25942 RNF114-202ENST00000622920 1284 ntTSL 5 BASIC18.77■□□□□ 0.6
CD40P25942 PCDH1-204ENST00000503492 2373 ntTSL 5 BASIC18.77■□□□□ 0.6
CD40P25942 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC18.77■□□□□ 0.59
CD40P25942 ASL-203ENST00000380839 1765 ntTSL 5 BASIC18.76■□□□□ 0.59
CD40P25942 CCND3-202ENST00000372988 2133 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
CD40P25942 RASGRP2-203ENST00000377486 667 ntTSL 3 BASIC18.76■□□□□ 0.59
CD40P25942 FAM66D-201ENST00000434078 918 ntTSL 5 BASIC18.76■□□□□ 0.59
CD40P25942 AL590128.2-201ENST00000442889 415 ntTSL 3 BASIC18.76■□□□□ 0.59
CD40P25942 H1FX-AS1-204ENST00000511998 917 ntTSL 5 BASIC18.76■□□□□ 0.59
CD40P25942 AC079089.2-201ENST00000531211 1277 ntBASIC18.76■□□□□ 0.59
CD40P25942 TSEN15-207ENST00000533373 618 ntTSL 2 BASIC18.76■□□□□ 0.59
CD40P25942 AC022517.1-201ENST00000592429 346 ntBASIC18.76■□□□□ 0.59
CD40P25942 CCDC96-201ENST00000310085 2091 ntAPPRIS P1 BASIC18.76■□□□□ 0.59
CD40P25942 AL391650.1-201ENST00000448923 1468 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
CD40P25942 WDR86-208ENST00000628331 1905 ntTSL 5 BASIC18.76■□□□□ 0.59
CD40P25942 FOSL1-201ENST00000312562 1669 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CD40P25942 ERF-201ENST00000222329 2698 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CD40P25942 DLL3-201ENST00000205143 2332 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
CD40P25942 SPI1-202ENST00000378538 1403 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
CD40P25942 UCN-201ENST00000296099 795 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CD40P25942 TCTEX1D4-201ENST00000339355 763 ntAPPRIS P1 BASIC18.75■□□□□ 0.59
CD40P25942 FNDC3B-204ENST00000421757 946 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
CD40P25942 ATE1-AS1-201ENST00000437593 951 ntTSL 2 BASIC18.75■□□□□ 0.59
CD40P25942 AC011511.3-201ENST00000587088 355 ntTSL 2 BASIC18.75■□□□□ 0.59
CD40P25942 TNFRSF11A-207ENST00000639222 855 ntAPPRIS ALT2 TSL 5 BASIC18.75■□□□□ 0.59
CD40P25942 ESRRA-203ENST00000406310 2218 ntAPPRIS ALT1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CD40P25942 SNF8-202ENST00000502492 2319 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
CD40P25942 GCA-201ENST00000233612 1694 ntTSL 2 BASIC18.75■□□□□ 0.59
CD40P25942 FAHD1-201ENST00000382666 1964 ntTSL 2 BASIC18.75■□□□□ 0.59
CD40P25942 RBPMS2-201ENST00000300069 2008 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CD40P25942 FBXW4-201ENST00000331272 2483 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CD40P25942 RAB24-202ENST00000303270 1385 ntTSL 2 BASIC18.74■□□□□ 0.59
CD40P25942 ADAMTS13-204ENST00000371911 1155 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
CD40P25942 GXYLT1P2-201ENST00000433312 1230 ntBASIC18.74■□□□□ 0.59
CD40P25942 NDUFB2-207ENST00000465506 1101 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CD40P25942 AL355102.2-201ENST00000553811 600 ntAPPRIS P1 TSL 2 BASIC18.74■□□□□ 0.59
CD40P25942 NEDD4L-225ENST00000589054 1033 ntTSL 3 BASIC18.74■□□□□ 0.59
CD40P25942 TTC9-201ENST00000256367 5217 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CD40P25942 KCNQ4-204ENST00000509682 1926 ntAPPRIS ALT2 TSL 5 BASIC18.74■□□□□ 0.59
CD40P25942 RASL12-202ENST00000421977 1523 ntTSL 2 BASIC18.74■□□□□ 0.59
CD40P25942 RABEP2-201ENST00000357573 2175 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
CD40P25942 SRPK3-202ENST00000370101 1958 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
CD40P25942 CCDC7-201ENST00000277657 1899 ntAPPRIS P2 TSL 1 (best) BASIC18.73■□□□□ 0.59
CD40P25942 RAB28-208ENST00000630951 1679 ntTSL 5 BASIC18.73■□□□□ 0.59
CD40P25942 ACYP2-201ENST00000303536 789 ntTSL 2 BASIC18.73■□□□□ 0.59
CD40P25942 HIST2H2AC-201ENST00000331380 390 ntAPPRIS P1 BASIC18.73■□□□□ 0.59
CD40P25942 C5orf38-201ENST00000334000 890 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
CD40P25942 TNFRSF18-202ENST00000379265 705 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
CD40P25942 AC073343.2-201ENST00000413182 548 ntTSL 4 BASIC18.73■□□□□ 0.59
CD40P25942 AC127029.2-201ENST00000577329 502 ntTSL 3 BASIC18.73■□□□□ 0.59
CD40P25942 DOC2A-218ENST00000616445 2065 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 43.4 ms