Protein–RNA interactions for Protein: P25067

COL8A2, Collagen alpha-2(VIII) chain, humanhuman

Predictions only

Length 703 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A2P25067 PHPT1-201ENST00000247665 890 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
COL8A2P25067 MOSPD3-202ENST00000379527 1016 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
COL8A2P25067 ORMDL1-202ENST00000392349 1137 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
COL8A2P25067 AC012313.1-204ENST00000444227 462 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
COL8A2P25067 TMEM70-203ENST00000517439 617 ntTSL 2 BASIC18.4■□□□□ 0.54
COL8A2P25067 SMUG1-215ENST00000508394 1697 ntAPPRIS P1 TSL 2 BASIC18.4■□□□□ 0.54
COL8A2P25067 LINC02228-203ENST00000641970 1355 ntBASIC18.4■□□□□ 0.54
COL8A2P25067 DDN-AS1-202ENST00000547866 2114 ntTSL 3 BASIC18.4■□□□□ 0.54
COL8A2P25067 SPINT2-201ENST00000301244 1802 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.54
COL8A2P25067 AL137002.2-201ENST00000639766 2238 ntTSL 5 BASIC18.39■□□□□ 0.54
COL8A2P25067 SRPK3-204ENST00000370108 1863 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.54
COL8A2P25067 ZPBP2-201ENST00000348931 1543 ntAPPRIS P4 TSL 1 (best) BASIC18.39■□□□□ 0.54
COL8A2P25067 NFIX-203ENST00000397661 3143 ntTSL 5 BASIC18.39■□□□□ 0.53
COL8A2P25067 CCDC96-201ENST00000310085 2091 ntAPPRIS P1 BASIC18.39■□□□□ 0.53
COL8A2P25067 ZMYND11-210ENST00000403354 1664 ntTSL 5 BASIC18.39■□□□□ 0.53
COL8A2P25067 GUK1-207ENST00000366726 873 ntAPPRIS P3 TSL 3 BASIC18.39■□□□□ 0.53
COL8A2P25067 EIF6-203ENST00000374450 1289 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
COL8A2P25067 MFF-208ENST00000409616 1247 ntTSL 5 BASIC18.39■□□□□ 0.53
COL8A2P25067 KRT18P5-201ENST00000436075 1291 ntBASIC18.39■□□□□ 0.53
COL8A2P25067 GLI3-203ENST00000437480 451 ntTSL 2 BASIC18.39■□□□□ 0.53
COL8A2P25067 ATOX1-207ENST00000524142 749 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
COL8A2P25067 RPLP2-207ENST00000530797 637 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
COL8A2P25067 KRT18P14-201ENST00000534205 1250 ntBASIC18.39■□□□□ 0.53
COL8A2P25067 SLC25A42-201ENST00000318596 3120 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
COL8A2P25067 STX18-205ENST00000505286 1380 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
COL8A2P25067 EID2B-201ENST00000326282 1865 ntAPPRIS P1 BASIC18.39■□□□□ 0.53
COL8A2P25067 MPND-202ENST00000359935 1475 ntAPPRIS ALT2 TSL 2 BASIC18.39■□□□□ 0.53
COL8A2P25067 OXCT2P1-201ENST00000447263 1535 ntBASIC18.39■□□□□ 0.53
COL8A2P25067 PEBP1-201ENST00000261313 1697 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
COL8A2P25067 PDLIM3-203ENST00000284771 1672 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
COL8A2P25067 AC090377.1-201ENST00000585691 1762 ntTSL 3 BASIC18.38■□□□□ 0.53
COL8A2P25067 PTPRM-201ENST00000332175 6095 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
COL8A2P25067 LY6E-201ENST00000292494 1181 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
COL8A2P25067 MIR31HG-201ENST00000304425 745 ntTSL 2 BASIC18.38■□□□□ 0.53
COL8A2P25067 RNF208-201ENST00000391553 1077 ntAPPRIS P1 BASIC18.38■□□□□ 0.53
COL8A2P25067 RNF208-202ENST00000392827 1135 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
COL8A2P25067 AC019068.1-201ENST00000415226 552 ntTSL 4 BASIC18.38■□□□□ 0.53
COL8A2P25067 AC108002.2-201ENST00000519782 340 ntTSL 4 BASIC18.38■□□□□ 0.53
COL8A2P25067 GLI4-210ENST00000523522 1297 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
COL8A2P25067 ELANE-202ENST00000590230 1028 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
COL8A2P25067 SLC35A2-212ENST00000634665 486 ntTSL 4 BASIC18.38■□□□□ 0.53
COL8A2P25067 HOXD1-201ENST00000331462 1975 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
COL8A2P25067 HORMAD2-201ENST00000336726 2187 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
COL8A2P25067 SEC22C-207ENST00000423701 1458 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
COL8A2P25067 ST8SIA6-201ENST00000377602 2276 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
COL8A2P25067 SLAIN1-213ENST00000466548 2637 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
COL8A2P25067 FAM136A-201ENST00000037869 1810 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
COL8A2P25067 TBL1X-201ENST00000217964 5871 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
COL8A2P25067 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
COL8A2P25067 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC18.37■□□□□ 0.53
COL8A2P25067 PICK1-202ENST00000404072 2164 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
COL8A2P25067 SLC35A2-205ENST00000376529 865 ntTSL 3 BASIC18.37■□□□□ 0.53
COL8A2P25067 MIF4GD-211ENST00000580571 952 ntTSL 2 BASIC18.37■□□□□ 0.53
COL8A2P25067 TERF1P2-201ENST00000583350 1212 ntBASIC18.37■□□□□ 0.53
COL8A2P25067 SMUG1P1-201ENST00000590640 811 ntBASIC18.37■□□□□ 0.53
COL8A2P25067 CYHR1-201ENST00000306145 1409 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
COL8A2P25067 LINC00969-219ENST00000453324 1439 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
COL8A2P25067 DCAF8-211ENST00000475733 1426 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
COL8A2P25067 SPAG7-205ENST00000573366 1668 ntTSL 3 BASIC18.37■□□□□ 0.53
COL8A2P25067 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC18.37■□□□□ 0.53
COL8A2P25067 CERS4-205ENST00000558331 1803 ntTSL 5 BASIC18.37■□□□□ 0.53
COL8A2P25067 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
COL8A2P25067 ALG1L9P-201ENST00000508969 2165 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
COL8A2P25067 SLC22A17-201ENST00000206544 2284 ntAPPRIS P4 TSL 1 (best) BASIC18.37■□□□□ 0.53
COL8A2P25067 NDUFS3-201ENST00000263774 958 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
COL8A2P25067 UTS2R-201ENST00000313135 1357 ntAPPRIS P1 BASIC18.36■□□□□ 0.53
COL8A2P25067 AP1S1-201ENST00000337619 1306 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
COL8A2P25067 TSPAN2-201ENST00000369515 793 ntTSL 3 BASIC18.36■□□□□ 0.53
COL8A2P25067 AVPR2-203ENST00000370049 1307 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
COL8A2P25067 B3GALT6-201ENST00000379198 2777 ntAPPRIS P1 BASIC18.36■□□□□ 0.53
COL8A2P25067 IQCJ-SCHIP1-201ENST00000412423 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
COL8A2P25067 EIF3J-202ENST00000424492 1550 ntTSL 4 BASIC18.36■□□□□ 0.53
COL8A2P25067 H1FX-AS1-204ENST00000511998 917 ntTSL 5 BASIC18.36■□□□□ 0.53
COL8A2P25067 TSEN15-207ENST00000533373 618 ntTSL 2 BASIC18.36■□□□□ 0.53
COL8A2P25067 AC012313.1-203ENST00000597980 570 ntTSL 4 BASIC18.36■□□□□ 0.53
COL8A2P25067 KCNMA1-224ENST00000618048 1269 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
COL8A2P25067 KCNMA1-283ENST00000640523 5425 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
COL8A2P25067 LDB1-201ENST00000361198 2285 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
COL8A2P25067 DAZAP1-201ENST00000233078 2160 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
COL8A2P25067 IRX5-201ENST00000320990 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC18.35■□□□□ 0.53
COL8A2P25067 ACTL10-201ENST00000330271 2028 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
COL8A2P25067 IGSF21-201ENST00000251296 1943 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
COL8A2P25067 BX005040.4-201ENST00000637145 1518 ntBASIC18.35■□□□□ 0.53
COL8A2P25067 TPSG1-201ENST00000234798 1108 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
COL8A2P25067 URAD-201ENST00000332715 931 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
COL8A2P25067 KRTAP5-2-201ENST00000412090 1118 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
COL8A2P25067 AC092675.2-201ENST00000413274 541 ntTSL 4 BASIC18.35■□□□□ 0.53
COL8A2P25067 YJEFN3-203ENST00000514277 995 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
COL8A2P25067 AP001005.4-202ENST00000575325 560 ntTSL 4 BASIC18.35■□□□□ 0.53
COL8A2P25067 AC145207.2-202ENST00000576554 565 ntTSL 5 BASIC18.35■□□□□ 0.53
COL8A2P25067 NEDD4L-225ENST00000589054 1033 ntTSL 3 BASIC18.35■□□□□ 0.53
COL8A2P25067 LGI4-206ENST00000591633 1113 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
COL8A2P25067 H2AFB3-201ENST00000615853 591 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
COL8A2P25067 SLC30A2-201ENST00000374276 2494 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
COL8A2P25067 RBM4B-203ENST00000525754 2339 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
COL8A2P25067 C16orf72-201ENST00000327827 5953 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
COL8A2P25067 SPI1-202ENST00000378538 1403 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
COL8A2P25067 RASD1-202ENST00000579152 1404 ntTSL 2 BASIC18.34■□□□□ 0.53
COL8A2P25067 SPATA22-214ENST00000575375 1374 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
COL8A2P25067 PHACTR2-208ENST00000440869 2569 ntAPPRIS ALT2 TSL 2 BASIC18.34■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 111.2 ms