Protein–RNA interactions for Protein: P24386

CHM, Rab proteins geranylgeranyltransferase component A 1, humanhuman

Predictions only

Length 653 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP24386 EN1-201ENST00000295206 2457 ntAPPRIS P1 TSL 2 BASIC20.28■□□□□ 0.84
CHMP24386 DNAJC25-201ENST00000313525 2268 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
CHMP24386 PDLIM2-216ENST00000464275 1995 ntTSL 2 BASIC20.27■□□□□ 0.84
CHMP24386 AL353743.1-201ENST00000637846 1769 ntTSL 5 BASIC20.27■□□□□ 0.84
CHMP24386 ARIH2OS-201ENST00000408959 1598 ntAPPRIS P1 BASIC20.27■□□□□ 0.84
CHMP24386 AL138724.1-201ENST00000606771 1088 ntBASIC20.27■□□□□ 0.84
CHMP24386 AL136162.1-201ENST00000607711 1078 ntBASIC20.27■□□□□ 0.84
CHMP24386 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
CHMP24386 TMEM25-205ENST00000411589 2442 ntAPPRIS ALT2 TSL 2 BASIC20.27■□□□□ 0.84
CHMP24386 SAP30L-201ENST00000297109 6226 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
CHMP24386 IL15RA-204ENST00000379977 1626 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.83
CHMP24386 PCP4L1-201ENST00000504449 1424 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
CHMP24386 FAM19A5-202ENST00000358295 2638 ntAPPRIS P1 TSL 2 BASIC20.26■□□□□ 0.83
CHMP24386 AP004608.1-202ENST00000533390 1863 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
CHMP24386 GADD45GIP1-201ENST00000316939 1782 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CHMP24386 B3GALT4-204ENST00000451237 1694 ntAPPRIS P1 BASIC20.26■□□□□ 0.83
CHMP24386 ZNF784-201ENST00000325351 2021 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CHMP24386 HEXB-201ENST00000261416 1901 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CHMP24386 FP325331.1-202ENST00000623531 1380 ntBASIC20.26■□□□□ 0.83
CHMP24386 PYCARD-202ENST00000350605 696 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
CHMP24386 PBX2P1-201ENST00000493219 1291 ntBASIC20.26■□□□□ 0.83
CHMP24386 NDUFS3-206ENST00000528192 561 ntTSL 5 BASIC20.26■□□□□ 0.83
CHMP24386 TGFBR3L-202ENST00000565886 1260 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
CHMP24386 AC009086.3-201ENST00000623486 1008 ntBASIC20.26■□□□□ 0.83
CHMP24386 AC092902.2-206ENST00000625484 846 ntTSL 5 BASIC20.26■□□□□ 0.83
CHMP24386 SLC35A3-210ENST00000638371 2298 ntTSL 5 BASIC20.26■□□□□ 0.83
CHMP24386 SIMC1-202ENST00000341199 2056 ntAPPRIS P3 TSL 2 BASIC20.26■□□□□ 0.83
CHMP24386 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC20.26■□□□□ 0.83
CHMP24386 SCLY-201ENST00000254663 2562 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CHMP24386 ASPSCR1-208ENST00000580534 1776 ntTSL 2 BASIC20.26■□□□□ 0.83
CHMP24386 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC20.26■□□□□ 0.83
CHMP24386 AC135279.3-201ENST00000610945 1311 ntBASIC20.26■□□□□ 0.83
CHMP24386 ASRGL1-201ENST00000301776 2182 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CHMP24386 MANEAL-203ENST00000397631 2327 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
CHMP24386 UTS2R-201ENST00000313135 1357 ntAPPRIS P1 BASIC20.25■□□□□ 0.83
CHMP24386 ARL6IP4-201ENST00000315580 1644 ntAPPRIS P3 TSL 1 (best) BASIC20.25■□□□□ 0.83
CHMP24386 YTHDF1-201ENST00000370334 747 ntTSL 3 BASIC20.25■□□□□ 0.83
CHMP24386 CCDC107-203ENST00000378407 899 ntAPPRIS ALT2 TSL 2 BASIC20.25■□□□□ 0.83
CHMP24386 ACYP2-202ENST00000394666 993 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CHMP24386 SMIM29-205ENST00000468145 903 ntTSL 2 BASIC20.25■□□□□ 0.83
CHMP24386 SMIM29-207ENST00000481533 1053 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CHMP24386 ITPKC-201ENST00000263370 3385 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CHMP24386 ANKRD28-201ENST00000399451 6564 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
CHMP24386 CPNE2-201ENST00000290776 2645 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
CHMP24386 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC20.24■□□□□ 0.83
CHMP24386 RDX-204ENST00000528498 2511 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
CHMP24386 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
CHMP24386 C7orf25-203ENST00000431882 1645 ntTSL 2 BASIC20.24■□□□□ 0.83
CHMP24386 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
CHMP24386 TATDN2-201ENST00000287652 5342 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
CHMP24386 INPPL1-201ENST00000298229 4733 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
CHMP24386 TANGO2-210ENST00000432883 2084 ntTSL 2 BASIC20.24■□□□□ 0.83
CHMP24386 C19orf60-201ENST00000358607 839 ntAPPRIS P3 TSL 1 (best) BASIC20.24■□□□□ 0.83
CHMP24386 IL20RA-202ENST00000367746 1244 ntTSL 2 BASIC20.24■□□□□ 0.83
CHMP24386 C19orf60-202ENST00000450195 702 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
CHMP24386 AC087742.1-201ENST00000575880 1738 ntBASIC20.24■□□□□ 0.83
CHMP24386 MEF2A-207ENST00000558812 2186 ntTSL 2 BASIC20.24■□□□□ 0.83
CHMP24386 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC20.23■□□□□ 0.83
CHMP24386 ICAM5-201ENST00000221980 3000 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CHMP24386 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC20.23■□□□□ 0.83
CHMP24386 UHRF1BP1L-202ENST00000356828 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
CHMP24386 SERBP1P1-201ENST00000396021 1160 ntBASIC20.23■□□□□ 0.83
CHMP24386 ASB1-202ENST00000409297 878 ntTSL 5 BASIC20.23■□□□□ 0.83
CHMP24386 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC20.23■□□□□ 0.83
CHMP24386 ZSCAN18-217ENST00000601144 2190 ntAPPRIS P3 TSL 1 (best) BASIC20.23■□□□□ 0.83
CHMP24386 AC005837.3-201ENST00000612163 286 ntBASIC20.23■□□□□ 0.83
CHMP24386 JAGN1-201ENST00000307768 1693 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CHMP24386 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC20.22■□□□□ 0.83
CHMP24386 DUX4-203ENST00000565211 1710 ntAPPRIS P2 TSL 1 (best) BASIC20.22■□□□□ 0.83
CHMP24386 FBXW4P1-201ENST00000426721 2239 ntBASIC20.22■□□□□ 0.83
CHMP24386 REXO1-201ENST00000170168 4591 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CHMP24386 PTCHD3P2-201ENST00000424937 1205 ntBASIC20.22■□□□□ 0.83
CHMP24386 AC024257.2-201ENST00000549699 147 ntBASIC20.22■□□□□ 0.83
CHMP24386 AC011298.3-201ENST00000615796 283 ntBASIC20.22■□□□□ 0.83
CHMP24386 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC20.22■□□□□ 0.83
CHMP24386 C18orf8-214ENST00000615148 1958 ntTSL 5 BASIC20.22■□□□□ 0.83
CHMP24386 DPH7-201ENST00000277540 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CHMP24386 PICK1-202ENST00000404072 2164 ntAPPRIS P1 TSL 2 BASIC20.22■□□□□ 0.83
CHMP24386 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
CHMP24386 POC1B-209ENST00000549035 2038 ntTSL 2 BASIC20.22■□□□□ 0.83
CHMP24386 DRAM2-201ENST00000286692 2246 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CHMP24386 XBP1-201ENST00000216037 1850 ntAPPRIS P2 TSL 1 (best) BASIC20.22■□□□□ 0.83
CHMP24386 CNTFR-202ENST00000378980 2052 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CHMP24386 AC144652.1-201ENST00000609974 1624 ntBASIC20.21■□□□□ 0.83
CHMP24386 AL355987.3-201ENST00000456614 735 ntAPPRIS P1 TSL 4 BASIC20.21■□□□□ 0.83
CHMP24386 CDKN2A-206ENST00000494262 989 ntTSL 3 BASIC20.21■□□□□ 0.83
CHMP24386 AC009097.2-201ENST00000562763 465 ntTSL 2 BASIC20.21■□□□□ 0.83
CHMP24386 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
CHMP24386 COMT-206ENST00000407537 1457 ntAPPRIS P3 TSL 5 BASIC20.21■□□□□ 0.83
CHMP24386 CACNB1-201ENST00000344140 1889 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
CHMP24386 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
CHMP24386 SLC30A5-201ENST00000380860 1317 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
CHMP24386 ZNF584-203ENST00000593920 2187 ntTSL 2 BASIC20.21■□□□□ 0.83
CHMP24386 SPPL2B-211ENST00000614794 1559 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
CHMP24386 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
CHMP24386 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
CHMP24386 CBR3-201ENST00000290354 1169 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CHMP24386 NAA38-201ENST00000333775 999 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
CHMP24386 EDA-201ENST00000338901 1233 ntBASIC20.2■□□□□ 0.82
CHMP24386 HES6-206ENST00000409574 738 ntTSL 2 BASIC20.2■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 34.5 ms