Protein–RNA interactions for Protein: P13236

CCL4, C-C motif chemokine 4, humanhuman

Predictions only

Length 92 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL4P13236 AC093762.3-201ENST00000641918 318 ntAPPRIS P1 BASIC20.7■□□□□ 0.9
CCL4P13236 WDR86-201ENST00000334493 2023 ntAPPRIS P1 TSL 5 BASIC20.7■□□□□ 0.9
CCL4P13236 ABHD12B-201ENST00000337334 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
CCL4P13236 C7orf25-203ENST00000431882 1645 ntTSL 2 BASIC20.69■□□□□ 0.9
CCL4P13236 NT5C-201ENST00000245552 954 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CCL4P13236 ANKRD63-201ENST00000434396 1143 ntAPPRIS P1 BASIC20.69■□□□□ 0.9
CCL4P13236 CDKN3-204ENST00000442975 727 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
CCL4P13236 AC006970.2-201ENST00000450065 779 ntBASIC20.69■□□□□ 0.9
CCL4P13236 ATP6V0B-205ENST00000472174 1298 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CCL4P13236 ZNF717-203ENST00000477374 1169 ntTSL 2 BASIC20.69■□□□□ 0.9
CCL4P13236 ATPIF1-204ENST00000497986 599 ntTSL 2 BASIC20.69■□□□□ 0.9
CCL4P13236 AC037459.4-201ENST00000517384 585 ntTSL 4 BASIC20.69■□□□□ 0.9
CCL4P13236 LINC01976-201ENST00000565120 434 ntTSL 2 BASIC20.69■□□□□ 0.9
CCL4P13236 TADA2B-201ENST00000310074 4350 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CCL4P13236 EN1-201ENST00000295206 2457 ntAPPRIS P1 TSL 2 BASIC20.69■□□□□ 0.9
CCL4P13236 DENND1B-204ENST00000367396 2177 ntAPPRIS P3 TSL 1 (best) BASIC20.69■□□□□ 0.9
CCL4P13236 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC20.69■□□□□ 0.9
CCL4P13236 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC20.69■□□□□ 0.9
CCL4P13236 C19orf67-203ENST00000548523 1427 ntAPPRIS P2 TSL 5 BASIC20.69■□□□□ 0.9
CCL4P13236 ZDHHC1-201ENST00000348579 2047 ntAPPRIS P2 TSL 1 (best) BASIC20.68■□□□□ 0.9
CCL4P13236 DECR2-201ENST00000219481 1615 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CCL4P13236 ZC3H14-202ENST00000302216 2560 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
CCL4P13236 AC005224.4-201ENST00000583262 1652 ntBASIC20.68■□□□□ 0.9
CCL4P13236 DDX42-201ENST00000359353 2783 ntTSL 5 BASIC20.68■□□□□ 0.9
CCL4P13236 LARP6-202ENST00000344870 527 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
CCL4P13236 ZNF696-204ENST00000520333 605 ntTSL 5 BASIC20.68■□□□□ 0.9
CCL4P13236 AC104771.1-201ENST00000603335 964 ntBASIC20.68■□□□□ 0.9
CCL4P13236 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC20.68■□□□□ 0.9
CCL4P13236 CERS4-205ENST00000558331 1803 ntTSL 5 BASIC20.68■□□□□ 0.9
CCL4P13236 VDAC1-203ENST00000395047 1873 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CCL4P13236 CEBPD-201ENST00000408965 2178 ntAPPRIS P1 BASIC20.68■□□□□ 0.9
CCL4P13236 AC090377.1-201ENST00000585691 1762 ntTSL 3 BASIC20.67■□□□□ 0.9
CCL4P13236 MLLT10-204ENST00000377091 905 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
CCL4P13236 AL645608.9-201ENST00000442292 829 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
CCL4P13236 SLC25A29-212ENST00000555927 960 ntTSL 2 BASIC20.67■□□□□ 0.9
CCL4P13236 ANTXR2-202ENST00000346652 1343 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
CCL4P13236 SDR39U1-208ENST00000554698 1364 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
CCL4P13236 MPND-202ENST00000359935 1475 ntAPPRIS ALT2 TSL 2 BASIC20.67■□□□□ 0.9
CCL4P13236 NFKBIE-201ENST00000275015 2581 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
CCL4P13236 GOLGA6L9-202ENST00000618348 1710 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
CCL4P13236 ACTL10-201ENST00000330271 2028 ntAPPRIS P1 BASIC20.66■□□□□ 0.9
CCL4P13236 B3GALNT2-202ENST00000366600 2015 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CCL4P13236 KRT18P11-201ENST00000435214 1283 ntBASIC20.66■□□□□ 0.9
CCL4P13236 IGFALS-203ENST00000568221 730 ntTSL 4 BASIC20.66■□□□□ 0.9
CCL4P13236 AC092143.4-201ENST00000570217 559 ntTSL 4 BASIC20.66■□□□□ 0.9
CCL4P13236 AC012313.6-201ENST00000599889 790 ntTSL 3 BASIC20.66■□□□□ 0.9
CCL4P13236 UCK2-201ENST00000367879 1375 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CCL4P13236 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC20.66■□□□□ 0.9
CCL4P13236 ZPBP2-201ENST00000348931 1543 ntAPPRIS P4 TSL 1 (best) BASIC20.66■□□□□ 0.9
CCL4P13236 SERBP1-202ENST00000370990 1621 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
CCL4P13236 WDR86-203ENST00000469830 1691 ntTSL 2 BASIC20.66■□□□□ 0.9
CCL4P13236 PXK-203ENST00000383715 1756 ntTSL 5 BASIC20.66■□□□□ 0.9
CCL4P13236 HMGA2-206ENST00000536545 1788 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
CCL4P13236 ANOS2P-203ENST00000472227 1816 ntBASIC20.66■□□□□ 0.9
CCL4P13236 TAZ-205ENST00000475699 1862 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
CCL4P13236 ID2-201ENST00000234091 2041 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CCL4P13236 RHOQ-201ENST00000238738 2975 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CCL4P13236 UTS2R-201ENST00000313135 1357 ntAPPRIS P1 BASIC20.65■□□□□ 0.9
CCL4P13236 ZNF451-202ENST00000370702 458 ntTSL 2 BASIC20.65■□□□□ 0.9
CCL4P13236 METTL26-203ENST00000397664 604 ntTSL 2 BASIC20.65■□□□□ 0.9
CCL4P13236 PIGP-203ENST00000399098 972 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
CCL4P13236 EMC9-206ENST00000560403 872 ntTSL 2 BASIC20.65■□□□□ 0.9
CCL4P13236 AC104187.1-201ENST00000607510 612 ntBASIC20.65■□□□□ 0.9
CCL4P13236 AGTR1-203ENST00000404754 2252 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CCL4P13236 RCC2-201ENST00000375433 2030 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CCL4P13236 DIXDC1-205ENST00000529225 1945 ntTSL 5 BASIC20.65■□□□□ 0.9
CCL4P13236 PACRGL-208ENST00000503585 1582 ntAPPRIS P1 TSL 2 BASIC20.64■□□□□ 0.9
CCL4P13236 MBOAT7-201ENST00000245615 2529 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
CCL4P13236 TBXA2R-202ENST00000411851 1494 ntTSL 2 BASIC20.64■□□□□ 0.89
CCL4P13236 AC009237.3-201ENST00000393279 1427 ntBASIC20.64■□□□□ 0.89
CCL4P13236 HRASLS-201ENST00000264735 1066 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
CCL4P13236 RAMP1-203ENST00000404910 857 ntTSL 2 BASIC20.64■□□□□ 0.89
CCL4P13236 AL109923.1-201ENST00000618799 583 ntBASIC20.64■□□□□ 0.89
CCL4P13236 GET4-201ENST00000265857 2090 ntAPPRIS P2 TSL 1 (best) BASIC20.64■□□□□ 0.89
CCL4P13236 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
CCL4P13236 SIX3-201ENST00000260653 2523 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
CCL4P13236 ZFPM1-201ENST00000319555 5380 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
CCL4P13236 R3HDM4-203ENST00000587975 1765 ntTSL 3 BASIC20.64■□□□□ 0.89
CCL4P13236 SAXO1-201ENST00000380530 1727 ntAPPRIS ALT2 TSL 2 BASIC20.64■□□□□ 0.89
CCL4P13236 FAM124A-204ENST00000615498 2383 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
CCL4P13236 FZD9-201ENST00000344575 2338 ntAPPRIS P1 BASIC20.64■□□□□ 0.89
CCL4P13236 SMOX-202ENST00000305958 2233 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CCL4P13236 GSTM3-202ENST00000361066 1565 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CCL4P13236 ADA-201ENST00000372874 1539 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CCL4P13236 SH2D3A-202ENST00000437152 2013 ntTSL 2 BASIC20.63■□□□□ 0.89
CCL4P13236 HOMER3-204ENST00000539827 1979 ntAPPRIS P3 TSL 1 (best) BASIC20.63■□□□□ 0.89
CCL4P13236 ZFP91-CNTF-201ENST00000389919 2319 ntAPPRIS P5 TSL 2 BASIC20.63■□□□□ 0.89
CCL4P13236 MIR663A-201ENST00000385250 93 ntBASIC20.63■□□□□ 0.89
CCL4P13236 AL355802.2-201ENST00000402069 882 ntBASIC20.63■□□□□ 0.89
CCL4P13236 NCF1B-203ENST00000435988 1254 ntBASIC20.63■□□□□ 0.89
CCL4P13236 SFTPC-205ENST00000521315 1046 ntAPPRIS ALT1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CCL4P13236 WT1-AS_3.1-201ENST00000613262 234 ntBASIC20.63■□□□□ 0.89
CCL4P13236 ROGDI-201ENST00000322048 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CCL4P13236 HOXA4-201ENST00000360046 1747 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CCL4P13236 DDN-AS1-202ENST00000547866 2114 ntTSL 3 BASIC20.63■□□□□ 0.89
CCL4P13236 INPP1-201ENST00000322522 1919 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CCL4P13236 KRT87P-202ENST00000534226 1464 ntBASIC20.62■□□□□ 0.89
CCL4P13236 PINK1-201ENST00000321556 2660 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CCL4P13236 ZYX-201ENST00000322764 2493 ntAPPRIS P2 TSL 1 (best) BASIC20.62■□□□□ 0.89
CCL4P13236 FAM86JP-203ENST00000485843 2012 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 28.1 ms