Protein–RNA interactions for Protein: P04233

CD74, HLA class II histocompatibility antigen gamma chain, humanhuman

Predictions only

Length 296 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD74P04233 R3HDM4-208ENST00000626716 138 ntTSL 5 BASIC18.29■□□□□ 0.52
CD74P04233 ACAA1-202ENST00000333167 1785 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CD74P04233 CBWD5-207ENST00000382405 1791 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CD74P04233 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC18.29■□□□□ 0.52
CD74P04233 CENPB-201ENST00000379751 2840 ntAPPRIS P1 BASIC18.29■□□□□ 0.52
CD74P04233 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC18.29■□□□□ 0.52
CD74P04233 DPP7-201ENST00000371579 1590 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CD74P04233 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
CD74P04233 ARSB-201ENST00000264914 5327 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CD74P04233 DISC1-213ENST00000537876 2349 ntAPPRIS ALT2 TSL 2 BASIC18.28■□□□□ 0.52
CD74P04233 HMOX1-201ENST00000216117 1822 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CD74P04233 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC18.28■□□□□ 0.52
CD74P04233 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CD74P04233 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC18.28■□□□□ 0.52
CD74P04233 EIF5A-211ENST00000576930 1439 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
CD74P04233 PHLDB2-210ENST00000478922 1861 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
CD74P04233 BID-215ENST00000622694 2199 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CD74P04233 PRSS33-202ENST00000570702 1676 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CD74P04233 WNT10B-202ENST00000403957 1817 ntTSL 5 BASIC18.28■□□□□ 0.52
CD74P04233 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CD74P04233 PHLDB3-207ENST00000599242 2286 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
CD74P04233 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
CD74P04233 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
CD74P04233 RNF40-201ENST00000324685 5634 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
CD74P04233 KCTD13-202ENST00000561540 1773 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
CD74P04233 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
CD74P04233 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
CD74P04233 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
CD74P04233 GBX1-201ENST00000297537 1092 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
CD74P04233 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.51
CD74P04233 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC18.27■□□□□ 0.51
CD74P04233 DTNBP1-201ENST00000338950 1880 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
CD74P04233 SOX18-201ENST00000340356 1864 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CD74P04233 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
CD74P04233 FMNL2-201ENST00000288670 5575 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CD74P04233 EZH2-201ENST00000320356 2639 ntAPPRIS P4 TSL 1 (best) BASIC18.26■□□□□ 0.51
CD74P04233 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CD74P04233 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC18.26■□□□□ 0.51
CD74P04233 PRELID1-201ENST00000303204 1261 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CD74P04233 PSMG4-207ENST00000451246 824 ntTSL 3 BASIC18.26■□□□□ 0.51
CD74P04233 GPRC5B-202ENST00000535671 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
CD74P04233 DUX4L4-201ENST00000566884 1269 ntBASIC18.26■□□□□ 0.51
CD74P04233 UBALD1-203ENST00000587649 707 ntTSL 3 BASIC18.26■□□□□ 0.51
CD74P04233 RAD51-210ENST00000557850 1397 ntTSL 2 BASIC18.26■□□□□ 0.51
CD74P04233 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC18.26■□□□□ 0.51
CD74P04233 PLPP1-202ENST00000307259 1597 ntAPPRIS ALT1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CD74P04233 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC18.25■□□□□ 0.51
CD74P04233 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CD74P04233 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
CD74P04233 H1FX-201ENST00000333762 1507 ntAPPRIS P1 BASIC18.25■□□□□ 0.51
CD74P04233 MAGI2-212ENST00000626691 4599 ntTSL 5 BASIC18.25■□□□□ 0.51
CD74P04233 KREMEN2-201ENST00000303746 2326 ntAPPRIS P4 TSL 1 (best) BASIC18.25■□□□□ 0.51
CD74P04233 KIRREL2-201ENST00000262625 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
CD74P04233 PSIP1-201ENST00000380715 1966 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
CD74P04233 NDEL1-219ENST00000585098 454 ntTSL 3 BASIC18.25■□□□□ 0.51
CD74P04233 HOMEZ-201ENST00000357460 4971 ntAPPRIS P2 TSL 1 (best) BASIC18.25■□□□□ 0.51
CD74P04233 METTL1-202ENST00000324871 2066 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CD74P04233 AC010616.1-201ENST00000597630 2078 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
CD74P04233 PDK3-201ENST00000379162 1809 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CD74P04233 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
CD74P04233 CCSAP-201ENST00000284617 5121 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CD74P04233 WHAMM-201ENST00000286760 5101 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CD74P04233 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC18.25■□□□□ 0.51
CD74P04233 GABRA2-214ENST00000515082 2366 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
CD74P04233 PIAS2-203ENST00000545673 1590 ntTSL 2 BASIC18.25■□□□□ 0.51
CD74P04233 GUCY1A3-210ENST00000513574 2656 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CD74P04233 DBP-201ENST00000222122 2229 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CD74P04233 AC090377.1-201ENST00000585691 1762 ntTSL 3 BASIC18.25■□□□□ 0.51
CD74P04233 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
CD74P04233 MFSD6L-201ENST00000329805 2188 ntAPPRIS P1 BASIC18.24■□□□□ 0.51
CD74P04233 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
CD74P04233 SNUPN-207ENST00000567134 1641 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
CD74P04233 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC18.24■□□□□ 0.51
CD74P04233 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
CD74P04233 C1QTNF12-201ENST00000330388 1036 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CD74P04233 ASB1-202ENST00000409297 878 ntTSL 5 BASIC18.24■□□□□ 0.51
CD74P04233 SSX2IP-209ENST00000603677 1149 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
CD74P04233 C1QTNF4-201ENST00000302514 1664 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CD74P04233 CTU2-202ENST00000453996 1751 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
CD74P04233 GAS2-202ENST00000454584 2286 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CD74P04233 AL359710.1-201ENST00000427039 1544 ntTSL 2 BASIC18.23■□□□□ 0.51
CD74P04233 GJB6-203ENST00000400065 1805 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CD74P04233 NF2-201ENST00000334961 2020 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
CD74P04233 PXK-211ENST00000484288 2031 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
CD74P04233 CEBPA-201ENST00000498907 2631 ntAPPRIS P1 BASIC18.23■□□□□ 0.51
CD74P04233 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC18.23■□□□□ 0.51
CD74P04233 HEY2-201ENST00000368364 2678 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CD74P04233 ARFRP1-214ENST00000622789 2559 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CD74P04233 CITED2-202ENST00000536159 1797 ntAPPRIS P1 TSL 3 BASIC18.23■□□□□ 0.51
CD74P04233 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
CD74P04233 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC18.23■□□□□ 0.51
CD74P04233 TMEM147-203ENST00000392205 767 ntTSL 2 BASIC18.23■□□□□ 0.51
CD74P04233 CDCA5-202ENST00000404147 1012 ntTSL 2 BASIC18.23■□□□□ 0.51
CD74P04233 PXMP2-205ENST00000543589 632 ntTSL 3 BASIC18.23■□□□□ 0.51
CD74P04233 SNX5-217ENST00000606557 1087 ntBASIC18.23■□□□□ 0.51
CD74P04233 ERO1A-211ENST00000629528 998 ntTSL 5 BASIC18.23■□□□□ 0.51
CD74P04233 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC18.23■□□□□ 0.51
CD74P04233 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CD74P04233 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CD74P04233 LINC01116-201ENST00000295549 1407 ntTSL 2 BASIC18.23■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 24 ms