Protein–RNA interactions for Protein: P04035

HMGCR, 3-hydroxy-3-methylglutaryl-coenzyme A reductase, humanhuman

Predictions only

Length 888 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCRP04035 NCAPD3-204ENST00000526422 1060 ntAPPRIS ALT2 TSL 2 BASIC24.76■■□□□ 1.55
HMGCRP04035 UBE2DNL-204ENST00000602536 740 ntBASIC24.76■■□□□ 1.55
HMGCRP04035 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC24.76■■□□□ 1.55
HMGCRP04035 NAT16-204ENST00000455377 1492 ntAPPRIS P2 TSL 1 (best) BASIC24.76■■□□□ 1.55
HMGCRP04035 SUGCT-209ENST00000628514 1591 ntAPPRIS P4 TSL 1 (best) BASIC24.76■■□□□ 1.55
HMGCRP04035 ECEL1-202ENST00000409941 2322 ntAPPRIS ALT1 TSL 1 (best) BASIC24.75■■□□□ 1.55
HMGCRP04035 ASL-203ENST00000380839 1765 ntTSL 5 BASIC24.75■■□□□ 1.55
HMGCRP04035 FKBP8-209ENST00000597960 1781 ntAPPRIS P3 TSL 5 BASIC24.75■■□□□ 1.55
HMGCRP04035 PTH1R-202ENST00000418619 2070 ntAPPRIS P1 TSL 5 BASIC24.75■■□□□ 1.55
HMGCRP04035 EFNA2-201ENST00000215368 949 ntAPPRIS P1 TSL 1 (best) BASIC24.75■■□□□ 1.55
HMGCRP04035 SPDYE2-201ENST00000341656 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC24.75■■□□□ 1.55
HMGCRP04035 NUDT8-202ENST00000376693 728 ntAPPRIS ALT2 TSL 2 BASIC24.75■■□□□ 1.55
HMGCRP04035 ARL5A-202ENST00000428992 747 ntTSL 2 BASIC24.75■■□□□ 1.55
HMGCRP04035 SPDYE2B-202ENST00000455020 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC24.75■■□□□ 1.55
HMGCRP04035 ABHD14A-204ENST00000491470 674 ntTSL 3 BASIC24.75■■□□□ 1.55
HMGCRP04035 HDGFL2-210ENST00000621835 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC24.75■■□□□ 1.55
HMGCRP04035 EED-207ENST00000528180 1745 ntTSL 5 BASIC24.75■■□□□ 1.55
HMGCRP04035 ACAA1-219ENST00000625927 1760 ntTSL 5 BASIC24.75■■□□□ 1.55
HMGCRP04035 ADAD2-202ENST00000315906 1995 ntAPPRIS ALT2 TSL 1 (best) BASIC24.74■■□□□ 1.55
HMGCRP04035 MORF4L1-202ENST00000379535 2274 ntTSL 2 BASIC24.74■■□□□ 1.55
HMGCRP04035 LYRM9-201ENST00000379102 501 ntAPPRIS P1 TSL 2 BASIC24.74■■□□□ 1.55
HMGCRP04035 SNRNP25-202ENST00000383018 1085 ntAPPRIS P2 TSL 1 (best) BASIC24.74■■□□□ 1.55
HMGCRP04035 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC24.74■■□□□ 1.55
HMGCRP04035 FADS3-204ENST00000525588 1254 ntTSL 5 BASIC24.74■■□□□ 1.55
HMGCRP04035 ANTXR2-202ENST00000346652 1343 ntTSL 1 (best) BASIC24.74■■□□□ 1.55
HMGCRP04035 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC24.74■■□□□ 1.55
HMGCRP04035 CSNK1E-203ENST00000396832 2791 ntAPPRIS P1 TSL 1 (best) BASIC24.73■■□□□ 1.55
HMGCRP04035 KCNIP2-206ENST00000356640 1989 ntTSL 1 (best) BASIC24.73■■□□□ 1.55
HMGCRP04035 FOSL1-201ENST00000312562 1669 ntAPPRIS P1 TSL 1 (best) BASIC24.73■■□□□ 1.55
HMGCRP04035 B3GNT4-201ENST00000324189 1642 ntTSL 1 (best) BASIC24.73■■□□□ 1.55
HMGCRP04035 SDR39U1-208ENST00000554698 1364 ntTSL 1 (best) BASIC24.73■■□□□ 1.55
HMGCRP04035 TRAPPC5-201ENST00000317378 790 ntAPPRIS P1 TSL 1 (best) BASIC24.73■■□□□ 1.55
HMGCRP04035 SERTAD4-AS1-201ENST00000437764 726 ntTSL 1 (best) BASIC24.73■■□□□ 1.55
HMGCRP04035 AC093827.2-201ENST00000512654 315 ntBASIC24.73■■□□□ 1.55
HMGCRP04035 AC133041.1-202ENST00000642053 222 ntBASIC24.73■■□□□ 1.55
HMGCRP04035 CHSY1-201ENST00000254190 4550 ntAPPRIS P1 TSL 1 (best) BASIC24.73■■□□□ 1.55
HMGCRP04035 DEAF1-201ENST00000382409 2500 ntAPPRIS P1 TSL 1 (best) BASIC24.73■■□□□ 1.55
HMGCRP04035 HTATIP2-204ENST00000451739 1748 ntAPPRIS P1 TSL 1 (best) BASIC24.72■■□□□ 1.55
HMGCRP04035 VIL1-204ENST00000440053 1454 ntTSL 1 (best) BASIC24.72■■□□□ 1.55
HMGCRP04035 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC24.72■■□□□ 1.55
HMGCRP04035 RIMKLB-205ENST00000535829 2236 ntAPPRIS P1 TSL 2 BASIC24.72■■□□□ 1.55
HMGCRP04035 AP000282.1-201ENST00000454622 682 ntTSL 2 BASIC24.72■■□□□ 1.55
HMGCRP04035 AL731577.2-201ENST00000508096 555 ntTSL 2 BASIC24.72■■□□□ 1.55
HMGCRP04035 EDA-210ENST00000527388 927 ntTSL 1 (best) BASIC24.72■■□□□ 1.55
HMGCRP04035 NDUFB10-204ENST00000569148 628 ntTSL 2 BASIC24.72■■□□□ 1.55
HMGCRP04035 AC005697.1-201ENST00000582441 582 ntAPPRIS P1 TSL 4 BASIC24.72■■□□□ 1.55
HMGCRP04035 DOK3-205ENST00000501403 1872 ntAPPRIS P1 TSL 5 BASIC24.72■■□□□ 1.55
HMGCRP04035 CCDC151-202ENST00000586836 1867 ntTSL 2 BASIC24.72■■□□□ 1.55
HMGCRP04035 AC005224.4-201ENST00000583262 1652 ntBASIC24.72■■□□□ 1.55
HMGCRP04035 GNAS-201ENST00000265620 1866 ntAPPRIS P3 TSL 1 (best) BASIC24.71■■□□□ 1.55
HMGCRP04035 RITA1-203ENST00000552495 1898 ntTSL 2 BASIC24.71■■□□□ 1.55
HMGCRP04035 XXYLT1-202ENST00000356740 564 ntTSL 2 BASIC24.71■■□□□ 1.55
HMGCRP04035 HBM-201ENST00000356815 506 ntAPPRIS P1 TSL 1 (best) BASIC24.71■■□□□ 1.55
HMGCRP04035 AC073210.2-201ENST00000430369 194 ntBASIC24.71■■□□□ 1.55
HMGCRP04035 DET1-205ENST00000558413 583 ntTSL 4 BASIC24.71■■□□□ 1.55
HMGCRP04035 CDX1-201ENST00000231656 1758 ntAPPRIS P1 TSL 1 (best) BASIC24.71■■□□□ 1.55
HMGCRP04035 USP25-203ENST00000351097 2158 ntTSL 1 (best) BASIC24.71■■□□□ 1.55
HMGCRP04035 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC24.71■■□□□ 1.55
HMGCRP04035 RUNDC3A-202ENST00000426726 2048 ntAPPRIS P1 TSL 1 (best) BASIC24.71■■□□□ 1.55
HMGCRP04035 STX4-201ENST00000313843 1481 ntAPPRIS P1 TSL 1 (best) BASIC24.7■■□□□ 1.55
HMGCRP04035 RPIA-201ENST00000283646 1848 ntAPPRIS P1 TSL 1 (best) BASIC24.7■■□□□ 1.55
HMGCRP04035 PON2-202ENST00000433091 1726 ntTSL 1 (best) BASIC24.7■■□□□ 1.54
HMGCRP04035 SBK2-201ENST00000344158 1056 ntAPPRIS P1 TSL 2 BASIC24.7■■□□□ 1.54
HMGCRP04035 SBK2-202ENST00000413299 1085 ntAPPRIS P1 TSL 5 BASIC24.7■■□□□ 1.54
HMGCRP04035 MVB12A-212ENST00000543795 1154 ntAPPRIS P1 TSL 5 BASIC24.7■■□□□ 1.54
HMGCRP04035 AC034102.6-201ENST00000550947 559 ntTSL 4 BASIC24.7■■□□□ 1.54
HMGCRP04035 NMRAL1-212ENST00000574425 1240 ntAPPRIS P1 TSL 2 BASIC24.7■■□□□ 1.54
HMGCRP04035 TBCB-214ENST00000629269 413 ntTSL 5 BASIC24.7■■□□□ 1.54
HMGCRP04035 MYCNOS-205ENST00000641950 531 ntBASIC24.7■■□□□ 1.54
HMGCRP04035 TBL2-222ENST00000610724 2165 ntTSL 5 BASIC24.7■■□□□ 1.54
HMGCRP04035 ZNF767P-202ENST00000472212 2100 ntTSL 1 (best) BASIC24.7■■□□□ 1.54
HMGCRP04035 PACS2-201ENST00000325438 3708 ntAPPRIS P1 TSL 1 (best) BASIC24.69■■□□□ 1.54
HMGCRP04035 AL139125.2-201ENST00000623134 1869 ntBASIC24.69■■□□□ 1.54
HMGCRP04035 GUK1-201ENST00000312726 1084 ntAPPRIS P3 TSL 1 (best) BASIC24.69■■□□□ 1.54
HMGCRP04035 AC099522.1-201ENST00000505955 881 ntTSL 3 BASIC24.69■■□□□ 1.54
HMGCRP04035 AF201337.1-201ENST00000520239 748 ntBASIC24.69■■□□□ 1.54
HMGCRP04035 BRI3-207ENST00000539286 699 ntTSL 2 BASIC24.69■■□□□ 1.54
HMGCRP04035 ULK4P1-204ENST00000565949 721 ntTSL 4 BASIC24.69■■□□□ 1.54
HMGCRP04035 AC016888.1-201ENST00000585285 565 ntTSL 3 BASIC24.69■■□□□ 1.54
HMGCRP04035 ESR2-202ENST00000341099 2060 ntAPPRIS P1 TSL 1 (best) BASIC24.69■■□□□ 1.54
HMGCRP04035 ENTPD4-201ENST00000356206 2097 ntTSL 1 (best) BASIC24.69■■□□□ 1.54
HMGCRP04035 ENTPD4-203ENST00000417069 2063 ntAPPRIS P1 TSL 1 (best) BASIC24.69■■□□□ 1.54
HMGCRP04035 SOX1-201ENST00000330949 2842 ntAPPRIS P1 BASIC24.69■■□□□ 1.54
HMGCRP04035 ITM2C-203ENST00000335005 1889 ntTSL 1 (best) BASIC24.68■■□□□ 1.54
HMGCRP04035 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC24.68■■□□□ 1.54
HMGCRP04035 AL591684.2-201ENST00000605970 1594 ntTSL 5 BASIC24.68■■□□□ 1.54
HMGCRP04035 EPCAM-202ENST00000405271 1530 ntTSL 5 BASIC24.68■■□□□ 1.54
HMGCRP04035 AC096677.1-201ENST00000454651 1516 ntTSL 2 BASIC24.68■■□□□ 1.54
HMGCRP04035 ZSWIM7-205ENST00000472495 703 ntAPPRIS P1 TSL 1 (best) BASIC24.68■■□□□ 1.54
HMGCRP04035 SNHG6-203ENST00000520944 638 ntTSL 1 (best) BASIC24.68■■□□□ 1.54
HMGCRP04035 TMCC2-209ENST00000637895 1455 ntTSL 1 (best) BASIC24.68■■□□□ 1.54
HMGCRP04035 FMR1-AS1-202ENST00000596112 1845 ntTSL 1 (best) BASIC24.68■■□□□ 1.54
HMGCRP04035 PIP5K1C-203ENST00000539785 2289 ntAPPRIS ALT2 TSL 2 BASIC24.67■■□□□ 1.54
HMGCRP04035 ZNF205-202ENST00000382192 2062 ntAPPRIS P1 TSL 1 (best) BASIC24.67■■□□□ 1.54
HMGCRP04035 CTU2-201ENST00000312060 1672 ntAPPRIS P3 TSL 5 BASIC24.67■■□□□ 1.54
HMGCRP04035 CREB3L3-202ENST00000595923 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC24.67■■□□□ 1.54
HMGCRP04035 ABCC6P2-202ENST00000542005 706 ntTSL 1 (best) BASIC24.67■■□□□ 1.54
HMGCRP04035 ABCC6-204ENST00000575728 714 ntTSL 1 (best) BASIC24.67■■□□□ 1.54
HMGCRP04035 AC008687.6-201ENST00000596318 630 ntBASIC24.67■■□□□ 1.54
HMGCRP04035 JADE2-211ENST00000612830 1251 ntTSL 1 (best) BASIC24.67■■□□□ 1.54
Retrieved 100 of 98,524 protein–RNA pairs in 14.9 ms