Protein–RNA interactions for Protein: P03897

MT-ND3, NADH-ubiquinone oxidoreductase chain 3, humanhuman

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-ND3P03897 IQCJ-SCHIP1-203ENST00000476809 1780 ntAPPRIS ALT2 TSL 5 BASIC22.09■■□□□ 1.13
MT-ND3P03897 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC22.09■■□□□ 1.13
MT-ND3P03897 C1QTNF1-207ENST00000580454 1396 ntAPPRIS P1 TSL 5 BASIC22.09■■□□□ 1.13
MT-ND3P03897 ADRM1-205ENST00000620230 1361 ntTSL 5 BASIC22.09■■□□□ 1.13
MT-ND3P03897 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC22.09■■□□□ 1.13
MT-ND3P03897 ODF3L2-201ENST00000315489 1604 ntAPPRIS P2 TSL 1 (best) BASIC22.09■■□□□ 1.13
MT-ND3P03897 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC22.09■■□□□ 1.13
MT-ND3P03897 NALT1-201ENST00000429224 738 ntTSL 5 BASIC22.08■■□□□ 1.13
MT-ND3P03897 AL117336.3-202ENST00000605499 489 ntTSL 3 BASIC22.08■■□□□ 1.13
MT-ND3P03897 MIR6722-201ENST00000617286 78 ntBASIC22.08■■□□□ 1.13
MT-ND3P03897 DACH1-201ENST00000611519 4789 ntAPPRIS ALT2 TSL 1 (best) BASIC22.08■■□□□ 1.13
MT-ND3P03897 SLC25A5-AS1-202ENST00000445759 1616 ntTSL 1 (best) BASIC22.08■■□□□ 1.13
MT-ND3P03897 LCK-214ENST00000619559 2099 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.12
MT-ND3P03897 PACRGL-201ENST00000295290 1937 ntTSL 5 BASIC22.08■■□□□ 1.12
MT-ND3P03897 MMEL1-206ENST00000502556 1943 ntTSL 1 (best) BASIC22.08■■□□□ 1.12
MT-ND3P03897 STK19-201ENST00000375331 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC22.07■■□□□ 1.12
MT-ND3P03897 AC007326.4-201ENST00000638240 1669 ntAPPRIS P1 TSL 5 BASIC22.07■■□□□ 1.12
MT-ND3P03897 RPS6KA2-201ENST00000265678 5824 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
MT-ND3P03897 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC22.07■■□□□ 1.12
MT-ND3P03897 AC009126.1-201ENST00000501338 2245 ntTSL 2 BASIC22.07■■□□□ 1.12
MT-ND3P03897 RUFY1-201ENST00000319449 2646 ntAPPRIS P3 TSL 1 (best) BASIC22.07■■□□□ 1.12
MT-ND3P03897 C1QTNF12-201ENST00000330388 1036 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
MT-ND3P03897 ERRFI1-203ENST00000469499 995 ntTSL 3 BASIC22.07■■□□□ 1.12
MT-ND3P03897 SLC25A39-203ENST00000537904 1274 ntTSL 2 BASIC22.07■■□□□ 1.12
MT-ND3P03897 RNF225-201ENST00000601382 990 ntAPPRIS P1 BASIC22.07■■□□□ 1.12
MT-ND3P03897 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC22.07■■□□□ 1.12
MT-ND3P03897 AC119427.1-201ENST00000633182 556 ntTSL 4 BASIC22.07■■□□□ 1.12
MT-ND3P03897 PHACTR3-202ENST00000359926 2252 ntTSL 2 BASIC22.06■■□□□ 1.12
MT-ND3P03897 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
MT-ND3P03897 FBXW7-202ENST00000281708 4976 ntAPPRIS P4 TSL 1 (best) BASIC22.06■■□□□ 1.12
MT-ND3P03897 EIF4EBP1-201ENST00000338825 1020 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
MT-ND3P03897 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC22.06■■□□□ 1.12
MT-ND3P03897 CERS1-205ENST00000623927 2558 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
MT-ND3P03897 ING1-201ENST00000333219 5119 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
MT-ND3P03897 TOX2-201ENST00000341197 1880 ntAPPRIS P1 TSL 2 BASIC22.05■■□□□ 1.12
MT-ND3P03897 EMC9-201ENST00000216799 835 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
MT-ND3P03897 RAB33A-201ENST00000257017 1258 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
MT-ND3P03897 KRTAP5-1-201ENST00000382171 942 ntAPPRIS P1 BASIC22.05■■□□□ 1.12
MT-ND3P03897 KRAS-204ENST00000557334 1052 ntTSL 5 BASIC22.05■■□□□ 1.12
MT-ND3P03897 AC133065.2-201ENST00000573379 2147 ntTSL 2 BASIC22.05■■□□□ 1.12
MT-ND3P03897 AL445237.1-202ENST00000604581 425 ntTSL 5 BASIC22.05■■□□□ 1.12
MT-ND3P03897 SNX5-217ENST00000606557 1087 ntBASIC22.05■■□□□ 1.12
MT-ND3P03897 TMEM80-207ENST00000608174 800 ntTSL 5 BASIC22.05■■□□□ 1.12
MT-ND3P03897 LINC01529-204ENST00000636474 1715 ntBASIC22.05■■□□□ 1.12
MT-ND3P03897 MXRA8-201ENST00000309212 2273 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
MT-ND3P03897 AVPR2-201ENST00000337474 1622 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
MT-ND3P03897 ZIM2-201ENST00000593711 2083 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
MT-ND3P03897 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
MT-ND3P03897 AL024507.2-201ENST00000606070 2574 ntBASIC22.04■■□□□ 1.12
MT-ND3P03897 C7orf25-201ENST00000350427 2451 ntAPPRIS P1 TSL 2 BASIC22.04■■□□□ 1.12
MT-ND3P03897 PIKFYVE-203ENST00000392202 2039 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
MT-ND3P03897 RBM38-203ENST00000356208 2382 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
MT-ND3P03897 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
MT-ND3P03897 PMPCA-201ENST00000371717 2174 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
MT-ND3P03897 LRRC34-201ENST00000446859 1718 ntAPPRIS ALT2 TSL 2 BASIC22.04■■□□□ 1.12
MT-ND3P03897 MIR638-201ENST00000385237 100 ntBASIC22.04■■□□□ 1.12
MT-ND3P03897 CBWD3-213ENST00000618217 1611 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
MT-ND3P03897 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC22.04■■□□□ 1.12
MT-ND3P03897 TMEM179-204ENST00000556573 1430 ntAPPRIS P1 TSL 3 BASIC22.04■■□□□ 1.12
MT-ND3P03897 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC22.04■■□□□ 1.12
MT-ND3P03897 PSMD7-201ENST00000219313 1670 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
MT-ND3P03897 KIAA0895-204ENST00000415803 2865 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
MT-ND3P03897 PLEKHO1-201ENST00000369124 2050 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
MT-ND3P03897 E2F1-201ENST00000343380 2503 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
MT-ND3P03897 ANAPC4-201ENST00000315368 2685 ntAPPRIS P3 TSL 1 (best) BASIC22.03■■□□□ 1.12
MT-ND3P03897 NAXE-201ENST00000368233 1012 ntTSL 2 BASIC22.03■■□□□ 1.12
MT-ND3P03897 TOLLIP-208ENST00000527938 549 ntTSL 4 BASIC22.03■■□□□ 1.12
MT-ND3P03897 AC093762.1-201ENST00000641981 837 ntAPPRIS P1 BASIC22.03■■□□□ 1.12
MT-ND3P03897 PLPP7-202ENST00000372264 2095 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
MT-ND3P03897 APLP1-203ENST00000586861 2052 ntTSL 2 BASIC22.03■■□□□ 1.12
MT-ND3P03897 ZNF669-201ENST00000343381 1951 ntAPPRIS P3 TSL 1 (best) BASIC22.03■■□□□ 1.12
MT-ND3P03897 LOXL1-AS1-210ENST00000567257 2358 ntTSL 2 BASIC22.03■■□□□ 1.12
MT-ND3P03897 GSN-204ENST00000373818 2657 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
MT-ND3P03897 TARBP2-201ENST00000266987 1867 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
MT-ND3P03897 LRCH4-209ENST00000497245 2014 ntTSL 5 BASIC22.02■■□□□ 1.12
MT-ND3P03897 ANKRD44-204ENST00000409919 1622 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
MT-ND3P03897 D2HGDH-201ENST00000321264 2617 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
MT-ND3P03897 CCDC85B-201ENST00000312579 1524 ntAPPRIS P1 BASIC22.02■■□□□ 1.12
MT-ND3P03897 MAP2K5-204ENST00000395476 1689 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
MT-ND3P03897 PEX10-202ENST00000447513 1997 ntAPPRIS P2 TSL 1 (best) BASIC22.02■■□□□ 1.12
MT-ND3P03897 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC22.02■■□□□ 1.12
MT-ND3P03897 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
MT-ND3P03897 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
MT-ND3P03897 TMEM147-203ENST00000392205 767 ntTSL 2 BASIC22.02■■□□□ 1.12
MT-ND3P03897 TMEM80-201ENST00000397510 1094 ntAPPRIS P2 TSL 5 BASIC22.02■■□□□ 1.12
MT-ND3P03897 GPX4-213ENST00000622390 1002 ntTSL 5 BASIC22.02■■□□□ 1.12
MT-ND3P03897 UBALD1-201ENST00000283474 1413 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
MT-ND3P03897 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC22.02■■□□□ 1.12
MT-ND3P03897 EEF1D-203ENST00000419152 1452 ntAPPRIS ALT2 TSL 5 BASIC22.02■■□□□ 1.12
MT-ND3P03897 MESP1-201ENST00000300057 2369 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.11
MT-ND3P03897 C16orf58-209ENST00000567994 1845 ntTSL 5 BASIC22.01■■□□□ 1.11
MT-ND3P03897 KIF12-207ENST00000640217 2194 ntAPPRIS P5 TSL 5 BASIC22.01■■□□□ 1.11
MT-ND3P03897 GTPBP6-201ENST00000326153 1907 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
MT-ND3P03897 GALNT8-202ENST00000433855 5977 ntTSL 2 BASIC22.01■■□□□ 1.11
MT-ND3P03897 RSPO1-201ENST00000356545 2621 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
MT-ND3P03897 ST3GAL4-215ENST00000532243 1825 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
MT-ND3P03897 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
MT-ND3P03897 MXRA8-203ENST00000445648 2001 ntTSL 2 BASIC22.01■■□□□ 1.11
MT-ND3P03897 AC026310.3-201ENST00000625186 2373 ntBASIC22.01■■□□□ 1.11
MT-ND3P03897 KREMEN2-203ENST00000571007 1877 ntTSL 2 BASIC22■■□□□ 1.11
Retrieved 100 of 98,524 protein–RNA pairs in 41.5 ms