Protein–RNA interactions for Protein: P01850

TRBC1, T-cell receptor beta-1 chain C region, humanhuman

Predictions only

Length 177 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBC1P01850 HES6-202ENST00000409002 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC21.83■■□□□ 1.09
TRBC1P01850 AC079089.2-201ENST00000531211 1277 ntBASIC21.83■■□□□ 1.09
TRBC1P01850 LINC02136-201ENST00000567469 530 ntTSL 4 BASIC21.83■■□□□ 1.09
TRBC1P01850 AZIN2-204ENST00000373443 2048 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
TRBC1P01850 RARA-202ENST00000394081 2285 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
TRBC1P01850 DTNB-210ENST00000407186 2275 ntTSL 5 BASIC21.83■■□□□ 1.09
TRBC1P01850 TRH-201ENST00000302649 1978 ntAPPRIS P2 TSL 1 (best) BASIC21.83■■□□□ 1.08
TRBC1P01850 H2AFY2-201ENST00000373255 1980 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
TRBC1P01850 SAXO1-201ENST00000380530 1727 ntAPPRIS ALT2 TSL 2 BASIC21.83■■□□□ 1.08
TRBC1P01850 GPR143-203ENST00000467482 1762 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
TRBC1P01850 FBXL22-201ENST00000360587 1526 ntAPPRIS P2 TSL 1 (best) BASIC21.82■■□□□ 1.08
TRBC1P01850 AP004608.1-202ENST00000533390 1863 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
TRBC1P01850 MTCH2-201ENST00000302503 2587 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
TRBC1P01850 FOXO1-201ENST00000379561 5735 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
TRBC1P01850 NOXO1-201ENST00000354249 1618 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
TRBC1P01850 GUK1-205ENST00000366722 850 ntTSL 3 BASIC21.82■■□□□ 1.08
TRBC1P01850 LHPP-203ENST00000392757 840 ntTSL 3 BASIC21.82■■□□□ 1.08
TRBC1P01850 PRODH-203ENST00000357068 2462 ntAPPRIS P3 TSL 1 (best) BASIC21.82■■□□□ 1.08
TRBC1P01850 ASB6-201ENST00000277458 2330 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
TRBC1P01850 KLF3-203ENST00000514033 1871 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
TRBC1P01850 USP21-202ENST00000368001 2095 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
TRBC1P01850 GLTPD2-201ENST00000331264 1023 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
TRBC1P01850 GADD45G-202ENST00000375769 977 ntTSL 2 BASIC21.81■■□□□ 1.08
TRBC1P01850 PRSS22-203ENST00000571228 1037 ntTSL 2 BASIC21.81■■□□□ 1.08
TRBC1P01850 NDUFAF1-201ENST00000260361 1461 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
TRBC1P01850 ADAP2-204ENST00000580525 1598 ntAPPRIS ALT2 TSL 1 (best) BASIC21.81■■□□□ 1.08
TRBC1P01850 IQCD-203ENST00000546692 1872 ntTSL 5 BASIC21.81■■□□□ 1.08
TRBC1P01850 LINC00454-202ENST00000430978 1327 ntTSL 5 BASIC21.8■■□□□ 1.08
TRBC1P01850 AC138028.2-201ENST00000440406 1539 ntTSL 2 BASIC21.8■■□□□ 1.08
TRBC1P01850 RHCE-204ENST00000349320 1810 ntAPPRIS ALT2 TSL 2 BASIC21.8■■□□□ 1.08
TRBC1P01850 RBMS1-205ENST00000409972 1815 ntTSL 5 BASIC21.8■■□□□ 1.08
TRBC1P01850 PLPP5-209ENST00000529359 2185 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
TRBC1P01850 NINJ1-201ENST00000375446 1281 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
TRBC1P01850 LRRC75A-AS1-202ENST00000470491 1057 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
TRBC1P01850 SLC12A2-201ENST00000262461 6885 ntAPPRIS P3 TSL 1 (best) BASIC21.8■■□□□ 1.08
TRBC1P01850 AC012676.1-201ENST00000574705 1949 ntBASIC21.8■■□□□ 1.08
TRBC1P01850 BARX2-201ENST00000281437 1813 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
TRBC1P01850 RELL2-205ENST00000518856 1419 ntTSL 5 BASIC21.8■■□□□ 1.08
TRBC1P01850 MAPKAPK5-AS1-201ENST00000428207 2290 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
TRBC1P01850 SIMC1-202ENST00000341199 2056 ntAPPRIS P3 TSL 2 BASIC21.79■■□□□ 1.08
TRBC1P01850 UPF3A-201ENST00000351487 2235 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
TRBC1P01850 CCDC154-201ENST00000389176 2212 ntAPPRIS P5 TSL 5 BASIC21.79■■□□□ 1.08
TRBC1P01850 ZNF419-203ENST00000354197 1569 ntTSL 5 BASIC21.79■■□□□ 1.08
TRBC1P01850 PHF10-202ENST00000366780 1589 ntAPPRIS ALT2 TSL 5 BASIC21.79■■□□□ 1.08
TRBC1P01850 PPT2-248ENST00000395523 2111 ntAPPRIS ALT2 TSL 5 BASIC21.79■■□□□ 1.08
TRBC1P01850 DPEP2-204ENST00000572888 2112 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
TRBC1P01850 PWWP2A-205ENST00000523662 1819 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
TRBC1P01850 PRDX4-202ENST00000379341 1005 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
TRBC1P01850 BASP1-203ENST00000616743 1711 ntAPPRIS P1 TSL 3 BASIC21.79■■□□□ 1.08
TRBC1P01850 KREMEN2-203ENST00000571007 1877 ntTSL 2 BASIC21.79■■□□□ 1.08
TRBC1P01850 CLN3-207ENST00000395653 1430 ntTSL 5 BASIC21.79■■□□□ 1.08
TRBC1P01850 TMEM198B-205ENST00000487582 1581 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
TRBC1P01850 MAGED2-206ENST00000375068 2189 ntAPPRIS P2 TSL 1 (best) BASIC21.78■■□□□ 1.08
TRBC1P01850 AC133561.1-201ENST00000568600 2415 ntBASIC21.78■■□□□ 1.08
TRBC1P01850 MSL1-203ENST00000577454 2081 ntTSL 2 BASIC21.78■■□□□ 1.08
TRBC1P01850 GNB2-201ENST00000303210 1878 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
TRBC1P01850 HOMER1-202ENST00000334082 5881 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
TRBC1P01850 P2RX2-202ENST00000348800 1222 ntAPPRIS ALT2 TSL 1 (best) BASIC21.78■■□□□ 1.08
TRBC1P01850 P2RX2-204ENST00000351222 1140 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
TRBC1P01850 TSPY4-201ENST00000383008 1143 ntAPPRIS ALT2 TSL 5 BASIC21.78■■□□□ 1.08
TRBC1P01850 MOSPD3-203ENST00000393950 1191 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
TRBC1P01850 P2RX2-207ENST00000449132 1113 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
TRBC1P01850 MED14OS-201ENST00000456333 900 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
TRBC1P01850 SLC39A3-203ENST00000545664 1219 ntTSL 2 BASIC21.78■■□□□ 1.08
TRBC1P01850 AC105233.4-201ENST00000642045 216 ntBASIC21.78■■□□□ 1.08
TRBC1P01850 AL359710.1-201ENST00000427039 1544 ntTSL 2 BASIC21.78■■□□□ 1.08
TRBC1P01850 CDK5-204ENST00000485972 1758 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
TRBC1P01850 UHRF1BP1L-202ENST00000356828 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC21.78■■□□□ 1.08
TRBC1P01850 BIN1-209ENST00000393040 2293 ntAPPRIS ALT2 TSL 1 (best) BASIC21.78■■□□□ 1.08
TRBC1P01850 CYHR1-201ENST00000306145 1409 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
TRBC1P01850 SIN3B-209ENST00000596802 2556 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
TRBC1P01850 AC080112.2-201ENST00000578774 2094 ntTSL 4 BASIC21.78■■□□□ 1.08
TRBC1P01850 AP1S1-201ENST00000337619 1306 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
TRBC1P01850 CKMT1B-207ENST00000441322 1747 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
TRBC1P01850 DISC1-223ENST00000628350 2363 ntAPPRIS ALT2 TSL 1 (best) BASIC21.77■■□□□ 1.08
TRBC1P01850 WT1-204ENST00000448076 2114 ntAPPRIS ALT2 TSL 2 BASIC21.77■■□□□ 1.08
TRBC1P01850 AC233723.2-201ENST00000623798 2106 ntBASIC21.77■■□□□ 1.08
TRBC1P01850 ST7L-201ENST00000343210 1866 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
TRBC1P01850 LINC00526-201ENST00000581067 1875 ntBASIC21.77■■□□□ 1.08
TRBC1P01850 ANKRD53-204ENST00000457410 1671 ntTSL 5 BASIC21.77■■□□□ 1.08
TRBC1P01850 HERC2P4-206ENST00000568097 1062 ntTSL 5 BASIC21.77■■□□□ 1.08
TRBC1P01850 GSX2-205ENST00000611459 1262 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
TRBC1P01850 NABP2-202ENST00000341463 1411 ntAPPRIS P1 TSL 3 BASIC21.77■■□□□ 1.08
TRBC1P01850 HEXB-201ENST00000261416 1901 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
TRBC1P01850 GPR6-202ENST00000414000 1945 ntTSL 2 BASIC21.76■■□□□ 1.07
TRBC1P01850 AC139530.1-201ENST00000575312 1977 ntBASIC21.76■■□□□ 1.07
TRBC1P01850 POLR2H-204ENST00000438240 994 ntTSL 3 BASIC21.76■■□□□ 1.07
TRBC1P01850 STOML2-202ENST00000452248 1296 ntTSL 2 BASIC21.76■■□□□ 1.07
TRBC1P01850 ITGA9-AS1-210ENST00000457661 738 ntTSL 4 BASIC21.76■■□□□ 1.07
TRBC1P01850 LGR4-203ENST00000480977 492 ntTSL 2 BASIC21.76■■□□□ 1.07
TRBC1P01850 TERT-206ENST00000508104 2486 ntTSL 5 BASIC21.76■■□□□ 1.07
TRBC1P01850 SMUG1P1-201ENST00000590640 811 ntBASIC21.76■■□□□ 1.07
TRBC1P01850 AC005775.1-201ENST00000592413 850 ntTSL 5 BASIC21.76■■□□□ 1.07
TRBC1P01850 CADPS-219ENST00000612439 5455 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
TRBC1P01850 ANKRD11-217ENST00000613312 1584 ntAPPRIS ALT2 TSL 5 BASIC21.76■■□□□ 1.07
TRBC1P01850 STOML2-205ENST00000619795 1293 ntTSL 3 BASIC21.76■■□□□ 1.07
TRBC1P01850 AC010999.2-201ENST00000621974 596 ntTSL 2 BASIC21.76■■□□□ 1.07
TRBC1P01850 B3GNT6-202ENST00000622824 2503 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
TRBC1P01850 SEC22C-207ENST00000423701 1458 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
TRBC1P01850 RAB24-201ENST00000303251 1311 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Retrieved 100 of 98,524 protein–RNA pairs in 54.3 ms