Protein–RNA interactions for Protein: O95833

CLIC3, Chloride intracellular channel protein 3, humanhuman

Predictions only

Length 236 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIC3O95833 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
CLIC3O95833 GOLGA2P6-201ENST00000340929 2049 ntBASIC20.05■□□□□ 0.8
CLIC3O95833 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC20.05■□□□□ 0.8
CLIC3O95833 T-202ENST00000366871 2250 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
CLIC3O95833 TMEM151B-202ENST00000451188 4895 ntAPPRIS P2 TSL 5 BASIC20.05■□□□□ 0.8
CLIC3O95833 MAF-202ENST00000393350 6384 ntAPPRIS ALT2 BASIC20.05■□□□□ 0.8
CLIC3O95833 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CLIC3O95833 CEL-201ENST00000372080 2384 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
CLIC3O95833 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
CLIC3O95833 U2AF1-201ENST00000291552 962 ntAPPRIS P3 TSL 1 (best) BASIC20.05■□□□□ 0.8
CLIC3O95833 GAK-223ENST00000628912 497 ntTSL 5 BASIC20.05■□□□□ 0.8
CLIC3O95833 METTL1-202ENST00000324871 2066 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CLIC3O95833 AC010616.1-201ENST00000597630 2078 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
CLIC3O95833 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CLIC3O95833 PIKFYVE-203ENST00000392202 2039 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
CLIC3O95833 PHLDB3-207ENST00000599242 2286 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
CLIC3O95833 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CLIC3O95833 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
CLIC3O95833 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CLIC3O95833 C7orf43-201ENST00000316937 2520 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CLIC3O95833 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC20.04■□□□□ 0.8
CLIC3O95833 IKBKG-206ENST00000594239 2299 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
CLIC3O95833 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC20.04■□□□□ 0.8
CLIC3O95833 MEDAG-201ENST00000380482 2374 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CLIC3O95833 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CLIC3O95833 AL136090.1-201ENST00000446849 366 ntTSL 3 BASIC20.04■□□□□ 0.8
CLIC3O95833 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC20.04■□□□□ 0.8
CLIC3O95833 NPY4R-201ENST00000374312 1956 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CLIC3O95833 NPY4R2-201ENST00000576178 1956 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CLIC3O95833 A1BG-201ENST00000263100 1722 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CLIC3O95833 DISC1-215ENST00000602281 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
CLIC3O95833 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
CLIC3O95833 PWWP2A-205ENST00000523662 1819 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
CLIC3O95833 HADH-201ENST00000309522 1912 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CLIC3O95833 AC012645.1-201ENST00000515455 1650 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
CLIC3O95833 DACH1-201ENST00000611519 4789 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
CLIC3O95833 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
CLIC3O95833 SPHK1-202ENST00000392496 1779 ntAPPRIS P3 TSL 1 (best) BASIC20.03■□□□□ 0.8
CLIC3O95833 NOX4-209ENST00000527626 1774 ntTSL 2 BASIC20.03■□□□□ 0.8
CLIC3O95833 XBP1-201ENST00000216037 1850 ntAPPRIS P2 TSL 1 (best) BASIC20.03■□□□□ 0.8
CLIC3O95833 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CLIC3O95833 FAM162B-201ENST00000368557 1036 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CLIC3O95833 PTPMT1-203ENST00000426530 1014 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
CLIC3O95833 AL592293.1-201ENST00000502889 1188 ntBASIC20.03■□□□□ 0.8
CLIC3O95833 LINC01233-202ENST00000598832 568 ntTSL 2 BASIC20.03■□□□□ 0.8
CLIC3O95833 BTBD17-201ENST00000375366 1805 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CLIC3O95833 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
CLIC3O95833 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CLIC3O95833 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CLIC3O95833 CIRBP-216ENST00000588090 1459 ntAPPRIS P3 TSL 3 BASIC20.03■□□□□ 0.8
CLIC3O95833 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC20.03■□□□□ 0.8
CLIC3O95833 PSIP1-201ENST00000380715 1966 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
CLIC3O95833 EGFL8-219ENST00000333845 1310 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
CLIC3O95833 AC138028.2-201ENST00000440406 1539 ntTSL 2 BASIC20.02■□□□□ 0.8
CLIC3O95833 FAM102B-201ENST00000370035 5600 ntAPPRIS P2 TSL 1 (best) BASIC20.02■□□□□ 0.8
CLIC3O95833 SPAST-204ENST00000621856 1715 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
CLIC3O95833 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
CLIC3O95833 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
CLIC3O95833 HES4-202ENST00000428771 1040 ntTSL 2 BASIC20.02■□□□□ 0.8
CLIC3O95833 HERC2P9-201ENST00000507787 1023 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
CLIC3O95833 C11orf96-203ENST00000617612 1294 ntAPPRIS P1 BASIC20.02■□□□□ 0.8
CLIC3O95833 AL391650.1-201ENST00000448923 1468 ntAPPRIS P1 TSL 2 BASIC20.02■□□□□ 0.8
CLIC3O95833 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.8
CLIC3O95833 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.79
CLIC3O95833 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC20.01■□□□□ 0.79
CLIC3O95833 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
CLIC3O95833 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
CLIC3O95833 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
CLIC3O95833 IL15RA-206ENST00000397248 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
CLIC3O95833 IKBKG-211ENST00000615874 1460 ntTSL 5 BASIC20.01■□□□□ 0.79
CLIC3O95833 IKBKG-215ENST00000619941 1463 ntTSL 5 BASIC20.01■□□□□ 0.79
CLIC3O95833 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
CLIC3O95833 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
CLIC3O95833 GRPEL2-204ENST00000513661 546 ntTSL 2 BASIC20.01■□□□□ 0.79
CLIC3O95833 HSD17B1P1-201ENST00000590052 955 ntBASIC20.01■□□□□ 0.79
CLIC3O95833 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
CLIC3O95833 PRKAA1-202ENST00000354209 1918 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
CLIC3O95833 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
CLIC3O95833 C19orf12-207ENST00000592153 1504 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
CLIC3O95833 STARD10-201ENST00000334805 1963 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
CLIC3O95833 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
CLIC3O95833 DTNBP1-201ENST00000338950 1880 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
CLIC3O95833 TUB-203ENST00000534099 1759 ntTSL 2 BASIC20■□□□□ 0.79
CLIC3O95833 AC007952.6-201ENST00000573168 2673 ntBASIC20■□□□□ 0.79
CLIC3O95833 AC003957.1-201ENST00000625108 2673 ntBASIC20■□□□□ 0.79
CLIC3O95833 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
CLIC3O95833 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC20■□□□□ 0.79
CLIC3O95833 CHST1-201ENST00000308064 2718 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
CLIC3O95833 STEAP2-207ENST00000402625 1372 ntTSL 5 BASIC20■□□□□ 0.79
CLIC3O95833 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
CLIC3O95833 PITX3-202ENST00000539804 1187 ntAPPRIS P1 TSL 5 BASIC20■□□□□ 0.79
CLIC3O95833 MIR6765-201ENST00000614092 87 ntBASIC20■□□□□ 0.79
CLIC3O95833 TRH-201ENST00000302649 1978 ntAPPRIS P2 TSL 1 (best) BASIC20■□□□□ 0.79
CLIC3O95833 ADAMTS10-205ENST00000595838 2458 ntTSL 2 BASIC20■□□□□ 0.79
CLIC3O95833 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC20■□□□□ 0.79
CLIC3O95833 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC20■□□□□ 0.79
CLIC3O95833 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC19.99■□□□□ 0.79
CLIC3O95833 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC19.99■□□□□ 0.79
CLIC3O95833 TPBGL-201ENST00000562197 2793 ntAPPRIS P1 BASIC19.99■□□□□ 0.79
CLIC3O95833 ABHD17AP3-201ENST00000503096 1137 ntBASIC19.99■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 26.9 ms