Protein–RNA interactions for Protein: O75677

RFPL1, Ret finger protein-like 1, humanhuman

Predictions only

Length 317 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFPL1O75677 PMPCA-201ENST00000371717 2174 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
RFPL1O75677 NPY4R-201ENST00000374312 1956 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
RFPL1O75677 NPY4R2-201ENST00000576178 1956 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
RFPL1O75677 SPN-202ENST00000395389 1935 ntAPPRIS P2 TSL 1 (best) BASIC21.86■■□□□ 1.09
RFPL1O75677 AL024507.2-201ENST00000606070 2574 ntBASIC21.86■■□□□ 1.09
RFPL1O75677 PWWP2A-205ENST00000523662 1819 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
RFPL1O75677 FBXL19-205ENST00000562319 2462 ntAPPRIS ALT2 TSL 2 BASIC21.85■■□□□ 1.09
RFPL1O75677 CCNG2-204ENST00000502280 1459 ntAPPRIS P1 TSL 2 BASIC21.85■■□□□ 1.09
RFPL1O75677 AL353743.1-201ENST00000637846 1769 ntTSL 5 BASIC21.85■■□□□ 1.09
RFPL1O75677 USP21-202ENST00000368001 2095 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
RFPL1O75677 OAF-201ENST00000328965 2525 ntAPPRIS P2 TSL 1 (best) BASIC21.85■■□□□ 1.09
RFPL1O75677 DTWD2-203ENST00000510708 2307 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
RFPL1O75677 TFG-201ENST00000240851 1978 ntAPPRIS P3 TSL 1 (best) BASIC21.85■■□□□ 1.09
RFPL1O75677 PDXK-205ENST00000398081 2251 ntTSL 2 BASIC21.85■■□□□ 1.09
RFPL1O75677 EIF2B4-211ENST00000616081 1754 ntTSL 5 BASIC21.84■■□□□ 1.09
RFPL1O75677 HSD11B1L-203ENST00000342970 1620 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
RFPL1O75677 RUFY1-201ENST00000319449 2646 ntAPPRIS P3 TSL 1 (best) BASIC21.84■■□□□ 1.09
RFPL1O75677 UBE2J2-201ENST00000347370 2387 ntTSL 3 BASIC21.84■■□□□ 1.09
RFPL1O75677 ZPBP2-201ENST00000348931 1543 ntAPPRIS P4 TSL 1 (best) BASIC21.84■■□□□ 1.09
RFPL1O75677 PPP3CC-201ENST00000240139 2189 ntAPPRIS P3 TSL 1 (best) BASIC21.84■■□□□ 1.09
RFPL1O75677 CERS1-205ENST00000623927 2558 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
RFPL1O75677 LRCH4-209ENST00000497245 2014 ntTSL 5 BASIC21.84■■□□□ 1.09
RFPL1O75677 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
RFPL1O75677 SLC41A3-202ENST00000346785 1705 ntTSL 2 BASIC21.83■■□□□ 1.09
RFPL1O75677 AC092384.1-201ENST00000378347 1812 ntTSL 2 BASIC21.83■■□□□ 1.09
RFPL1O75677 KPTN-201ENST00000338134 1691 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
RFPL1O75677 CD72-202ENST00000378430 585 ntTSL 3 BASIC21.83■■□□□ 1.09
RFPL1O75677 POLR2F-211ENST00000488684 564 ntTSL 2 BASIC21.83■■□□□ 1.09
RFPL1O75677 PPP1R14A-204ENST00000591291 433 ntTSL 5 BASIC21.83■■□□□ 1.09
RFPL1O75677 PLPP2-202ENST00000327790 1397 ntTSL 5 BASIC21.83■■□□□ 1.08
RFPL1O75677 FBXO27-202ENST00000509137 2130 ntAPPRIS P2 TSL 1 (best) BASIC21.83■■□□□ 1.08
RFPL1O75677 DACT1-204ENST00000541264 2610 ntAPPRIS ALT2 TSL 2 BASIC21.83■■□□□ 1.08
RFPL1O75677 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC21.83■■□□□ 1.08
RFPL1O75677 GPR6-202ENST00000414000 1945 ntTSL 2 BASIC21.82■■□□□ 1.08
RFPL1O75677 EFHD1-201ENST00000264059 2259 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
RFPL1O75677 DAPK3-202ENST00000545797 2257 ntAPPRIS P1 TSL 2 BASIC21.82■■□□□ 1.08
RFPL1O75677 PHLDB3-207ENST00000599242 2286 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
RFPL1O75677 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
RFPL1O75677 UBL7-202ENST00000395081 1427 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
RFPL1O75677 PHF7-201ENST00000327906 2130 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
RFPL1O75677 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
RFPL1O75677 ITPKC-201ENST00000263370 3385 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
RFPL1O75677 TRH-201ENST00000302649 1978 ntAPPRIS P2 TSL 1 (best) BASIC21.82■■□□□ 1.08
RFPL1O75677 TEAD2-201ENST00000311227 2164 ntAPPRIS P3 TSL 1 (best) BASIC21.82■■□□□ 1.08
RFPL1O75677 ZYG11B-202ENST00000545132 2294 ntTSL 2 BASIC21.82■■□□□ 1.08
RFPL1O75677 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC21.82■■□□□ 1.08
RFPL1O75677 CBWD2-203ENST00000416503 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC21.82■■□□□ 1.08
RFPL1O75677 H1FX-201ENST00000333762 1507 ntAPPRIS P1 BASIC21.81■■□□□ 1.08
RFPL1O75677 TRIM7-202ENST00000334421 1228 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
RFPL1O75677 CHAC1-201ENST00000444189 1204 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
RFPL1O75677 AC133561.4-201ENST00000566112 224 ntBASIC21.81■■□□□ 1.08
RFPL1O75677 AL512631.2-201ENST00000604634 923 ntBASIC21.81■■□□□ 1.08
RFPL1O75677 TMEM80-207ENST00000608174 800 ntTSL 5 BASIC21.81■■□□□ 1.08
RFPL1O75677 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC21.81■■□□□ 1.08
RFPL1O75677 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC21.81■■□□□ 1.08
RFPL1O75677 WDR86-207ENST00000621812 1542 ntTSL 5 BASIC21.8■■□□□ 1.08
RFPL1O75677 BTBD17-201ENST00000375366 1805 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
RFPL1O75677 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC21.8■■□□□ 1.08
RFPL1O75677 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC21.8■■□□□ 1.08
RFPL1O75677 SELENOO-201ENST00000380903 2315 ntAPPRIS P2 TSL 1 (best) BASIC21.8■■□□□ 1.08
RFPL1O75677 SELENOO-203ENST00000611222 2311 ntAPPRIS ALT2 TSL 5 BASIC21.8■■□□□ 1.08
RFPL1O75677 MEIS2-207ENST00000557796 2666 ntTSL 5 BASIC21.8■■□□□ 1.08
RFPL1O75677 C19orf12-201ENST00000323670 2464 ntAPPRIS P1 TSL 2 BASIC21.8■■□□□ 1.08
RFPL1O75677 AC080112.2-201ENST00000578774 2094 ntTSL 4 BASIC21.8■■□□□ 1.08
RFPL1O75677 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
RFPL1O75677 CA15P2-201ENST00000611168 834 ntBASIC21.8■■□□□ 1.08
RFPL1O75677 BICDL2-201ENST00000389347 1811 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
RFPL1O75677 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC21.8■■□□□ 1.08
RFPL1O75677 AC004687.1-201ENST00000579003 1625 ntBASIC21.8■■□□□ 1.08
RFPL1O75677 LPCAT4-201ENST00000314891 2262 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
RFPL1O75677 TOP1MT-201ENST00000329245 1958 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
RFPL1O75677 GMDS-202ENST00000380815 1752 ntAPPRIS P3 TSL 1 (best) BASIC21.79■■□□□ 1.08
RFPL1O75677 DBP-201ENST00000222122 2229 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
RFPL1O75677 KCNN4-201ENST00000262888 2240 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
RFPL1O75677 FBXO25-202ENST00000350302 2229 ntAPPRIS ALT1 TSL 1 (best) BASIC21.79■■□□□ 1.08
RFPL1O75677 SPPL2B-211ENST00000614794 1559 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
RFPL1O75677 FBXO17-201ENST00000292852 2386 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
RFPL1O75677 YTHDF1-201ENST00000370334 747 ntTSL 3 BASIC21.79■■□□□ 1.08
RFPL1O75677 LIN7B-202ENST00000391864 582 ntTSL 3 BASIC21.79■■□□□ 1.08
RFPL1O75677 ERRFI1-203ENST00000469499 995 ntTSL 3 BASIC21.79■■□□□ 1.08
RFPL1O75677 QDPR-206ENST00000508623 601 ntTSL 3 BASIC21.79■■□□□ 1.08
RFPL1O75677 MYL5-208ENST00000511290 781 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
RFPL1O75677 ZNF584-205ENST00000596281 575 ntTSL 2 BASIC21.79■■□□□ 1.08
RFPL1O75677 NKILA-201ENST00000613231 537 ntTSL 4 BASIC21.79■■□□□ 1.08
RFPL1O75677 CFP-202ENST00000377005 1435 ntAPPRIS ALT2 TSL 1 (best) BASIC21.79■■□□□ 1.08
RFPL1O75677 P4HTM-202ENST00000383729 2127 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
RFPL1O75677 D2HGDH-201ENST00000321264 2617 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
RFPL1O75677 DRD2-202ENST00000362072 2789 ntAPPRIS P2 TSL 1 (best) BASIC21.78■■□□□ 1.08
RFPL1O75677 STK11-205ENST00000586243 2777 ntAPPRIS ALT2 TSL 5 BASIC21.78■■□□□ 1.08
RFPL1O75677 AC009102.2-201ENST00000606772 1639 ntBASIC21.78■■□□□ 1.08
RFPL1O75677 SURF2-201ENST00000371964 842 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
RFPL1O75677 TFPT-201ENST00000391757 774 ntTSL 5 BASIC21.78■■□□□ 1.08
RFPL1O75677 TFPT-202ENST00000391758 804 ntAPPRIS ALT2 TSL 1 (best) BASIC21.78■■□□□ 1.08
RFPL1O75677 ERRFI1-204ENST00000474874 479 ntTSL 3 BASIC21.78■■□□□ 1.08
RFPL1O75677 NOX4-209ENST00000527626 1774 ntTSL 2 BASIC21.78■■□□□ 1.08
RFPL1O75677 FAH-202ENST00000407106 2152 ntAPPRIS P1 TSL 5 BASIC21.78■■□□□ 1.08
RFPL1O75677 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
RFPL1O75677 GSN-204ENST00000373818 2657 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
RFPL1O75677 C16orf72-201ENST00000327827 5953 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
RFPL1O75677 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
Retrieved 100 of 98,524 protein–RNA pairs in 49 ms