Protein–RNA interactions for Protein: O60547

GMDS, GDP-mannose 4,6 dehydratase, humanhuman

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GMDSO60547 TLX2-201ENST00000233638 2136 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
GMDSO60547 AP002893.1-201ENST00000528885 684 ntTSL 2 BASIC19.14■□□□□ 0.65
GMDSO60547 SLC25A39-203ENST00000537904 1274 ntTSL 2 BASIC19.14■□□□□ 0.65
GMDSO60547 AL117332.1-201ENST00000622628 974 ntBASIC19.14■□□□□ 0.65
GMDSO60547 NKX6-1-202ENST00000515820 2194 ntTSL 3 BASIC19.14■□□□□ 0.65
GMDSO60547 ADRM1-205ENST00000620230 1361 ntTSL 5 BASIC19.14■□□□□ 0.65
GMDSO60547 COMT-202ENST00000361682 2437 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.65
GMDSO60547 EN1-201ENST00000295206 2457 ntAPPRIS P1 TSL 2 BASIC19.14■□□□□ 0.65
GMDSO60547 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC19.14■□□□□ 0.65
GMDSO60547 NANOS2-201ENST00000341294 1657 ntAPPRIS P1 BASIC19.14■□□□□ 0.65
GMDSO60547 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
GMDSO60547 AKT1S1-206ENST00000391834 1849 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.65
GMDSO60547 AC092053.2-201ENST00000640557 1818 ntBASIC19.14■□□□□ 0.65
GMDSO60547 TEAD2-201ENST00000311227 2164 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
GMDSO60547 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC19.13■□□□□ 0.65
GMDSO60547 U2AF1-202ENST00000380276 940 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
GMDSO60547 AC136475.3-202ENST00000534742 812 ntTSL 2 BASIC19.13■□□□□ 0.65
GMDSO60547 MIR3621-201ENST00000580529 85 ntBASIC19.13■□□□□ 0.65
GMDSO60547 MIR222HG-201ENST00000602461 1379 ntTSL 5 BASIC19.13■□□□□ 0.65
GMDSO60547 FP325331.1-202ENST00000623531 1380 ntBASIC19.13■□□□□ 0.65
GMDSO60547 AC009102.2-201ENST00000606772 1639 ntBASIC19.13■□□□□ 0.65
GMDSO60547 ZNF669-201ENST00000343381 1951 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
GMDSO60547 PDLIM2-216ENST00000464275 1995 ntTSL 2 BASIC19.13■□□□□ 0.65
GMDSO60547 RASSF5-202ENST00000579436 2064 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
GMDSO60547 DISC1-212ENST00000535983 2505 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
GMDSO60547 PPP3CC-201ENST00000240139 2189 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
GMDSO60547 CNTFR-202ENST00000378980 2052 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
GMDSO60547 KCNIP1-201ENST00000328939 2014 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
GMDSO60547 ADORA2A-AS1-203ENST00000427813 2027 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
GMDSO60547 CREB1-205ENST00000430624 2005 ntAPPRIS P1 TSL 5 BASIC19.12■□□□□ 0.65
GMDSO60547 LINC01529-204ENST00000636474 1715 ntBASIC19.12■□□□□ 0.65
GMDSO60547 UBAP1L-203ENST00000559089 1694 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
GMDSO60547 SLC25A5-AS1-202ENST00000445759 1616 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
GMDSO60547 PFKFB4-202ENST00000383734 1491 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
GMDSO60547 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
GMDSO60547 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC19.12■□□□□ 0.65
GMDSO60547 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC19.12■□□□□ 0.65
GMDSO60547 LOXL1-AS1-210ENST00000567257 2358 ntTSL 2 BASIC19.12■□□□□ 0.65
GMDSO60547 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
GMDSO60547 PLPP5-209ENST00000529359 2185 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
GMDSO60547 LCK-214ENST00000619559 2099 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
GMDSO60547 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC19.12■□□□□ 0.65
GMDSO60547 APPL2-201ENST00000258530 3239 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
GMDSO60547 CCDC7-201ENST00000277657 1899 ntAPPRIS P2 TSL 1 (best) BASIC19.11■□□□□ 0.65
GMDSO60547 RHCE-204ENST00000349320 1810 ntAPPRIS ALT2 TSL 2 BASIC19.11■□□□□ 0.65
GMDSO60547 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
GMDSO60547 PRRT4-207ENST00000535159 2897 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
GMDSO60547 SNRNP70-201ENST00000221448 1603 ntTSL 2 BASIC19.11■□□□□ 0.65
GMDSO60547 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
GMDSO60547 ASCC1-204ENST00000394915 1510 ntTSL 5 BASIC19.11■□□□□ 0.65
GMDSO60547 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC19.11■□□□□ 0.65
GMDSO60547 P2RX2-205ENST00000352418 1200 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
GMDSO60547 ERRFI1-204ENST00000474874 479 ntTSL 3 BASIC19.11■□□□□ 0.65
GMDSO60547 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC19.11■□□□□ 0.65
GMDSO60547 SLC25A11-201ENST00000225665 1897 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
GMDSO60547 REXO1-201ENST00000170168 4591 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
GMDSO60547 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC19.11■□□□□ 0.65
GMDSO60547 PRELID2-201ENST00000334744 2140 ntTSL 2 BASIC19.1■□□□□ 0.65
GMDSO60547 CLPB-202ENST00000340729 2071 ntTSL 2 BASIC19.1■□□□□ 0.65
GMDSO60547 TMEM159-201ENST00000233047 2014 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
GMDSO60547 AC026310.3-201ENST00000625186 2373 ntBASIC19.1■□□□□ 0.65
GMDSO60547 BAD-203ENST00000394532 1157 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
GMDSO60547 TMEM218-209ENST00000529583 848 ntAPPRIS P1 TSL 3 BASIC19.1■□□□□ 0.65
GMDSO60547 NAA30-202ENST00000554703 795 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
GMDSO60547 TMEM80-207ENST00000608174 800 ntTSL 5 BASIC19.1■□□□□ 0.65
GMDSO60547 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
GMDSO60547 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
GMDSO60547 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
GMDSO60547 GMPPB-202ENST00000308388 1582 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
GMDSO60547 PACRGL-201ENST00000295290 1937 ntTSL 5 BASIC19.1■□□□□ 0.65
GMDSO60547 TULP1-202ENST00000322263 1941 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
GMDSO60547 P4HTM-201ENST00000343546 2268 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
GMDSO60547 SDSL-202ENST00000403593 1449 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
GMDSO60547 JUNB-201ENST00000302754 1820 ntAPPRIS P1 BASIC19.09■□□□□ 0.65
GMDSO60547 ASPSCR1-202ENST00000306739 1843 ntAPPRIS P3 TSL 1 (best) BASIC19.09■□□□□ 0.65
GMDSO60547 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC19.09■□□□□ 0.65
GMDSO60547 CA9-204ENST00000617161 1374 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
GMDSO60547 CNEP1R1-202ENST00000427478 2117 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
GMDSO60547 CBWD2-203ENST00000416503 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
GMDSO60547 FBXO17-201ENST00000292852 2386 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
GMDSO60547 MOSPD3-204ENST00000424091 1115 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
GMDSO60547 ARL6IP4-201ENST00000315580 1644 ntAPPRIS P3 TSL 1 (best) BASIC19.09■□□□□ 0.65
GMDSO60547 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
GMDSO60547 BIN1-209ENST00000393040 2293 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
GMDSO60547 DAPK3-202ENST00000545797 2257 ntAPPRIS P1 TSL 2 BASIC19.09■□□□□ 0.65
GMDSO60547 CCDC85B-201ENST00000312579 1524 ntAPPRIS P1 BASIC19.09■□□□□ 0.65
GMDSO60547 C17orf82-201ENST00000623772 1530 ntBASIC19.09■□□□□ 0.65
GMDSO60547 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
GMDSO60547 AC080112.2-201ENST00000578774 2094 ntTSL 4 BASIC19.09■□□□□ 0.65
GMDSO60547 CACNG2-201ENST00000300105 2384 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
GMDSO60547 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC19.08■□□□□ 0.65
GMDSO60547 GPR137B-202ENST00000366592 2042 ntAPPRIS P2 TSL 1 (best) BASIC19.08■□□□□ 0.65
GMDSO60547 UTS2R-201ENST00000313135 1357 ntAPPRIS P1 BASIC19.08■□□□□ 0.65
GMDSO60547 SRPK3-202ENST00000370101 1958 ntAPPRIS P3 TSL 1 (best) BASIC19.08■□□□□ 0.65
GMDSO60547 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC19.08■□□□□ 0.65
GMDSO60547 ASB1-202ENST00000409297 878 ntTSL 5 BASIC19.08■□□□□ 0.64
GMDSO60547 SUMF1-205ENST00000458465 1102 ntTSL 2 BASIC19.08■□□□□ 0.64
GMDSO60547 PICSAR-201ENST00000615826 733 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
GMDSO60547 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC19.08■□□□□ 0.64
GMDSO60547 COMT-206ENST00000407537 1457 ntAPPRIS P3 TSL 5 BASIC19.08■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 29.1 ms