Protein–RNA interactions for Protein: O60343

TBC1D4, TBC1 domain family member 4, humanhuman

Predictions only

Length 1,298 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TBC1D4O60343 LSR-201ENST00000347609 1880 ntAPPRIS ALT2 TSL 1 (best) BASIC23.12■■□□□ 1.29
TBC1D4O60343 CAMKMT-202ENST00000402247 665 ntTSL 2 BASIC23.12■■□□□ 1.29
TBC1D4O60343 GRPEL2-202ENST00000416916 1006 ntTSL 2 BASIC23.12■■□□□ 1.29
TBC1D4O60343 FNDC3B-204ENST00000421757 946 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
TBC1D4O60343 ARHGAP24-206ENST00000503995 1273 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
TBC1D4O60343 DLX3-202ENST00000512495 834 ntTSL 2 BASIC23.12■■□□□ 1.29
TBC1D4O60343 AC005410.1-201ENST00000579522 462 ntTSL 3 BASIC23.12■■□□□ 1.29
TBC1D4O60343 LSR-213ENST00000605618 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC23.12■■□□□ 1.29
TBC1D4O60343 AC093323.1-202ENST00000635031 2045 ntBASIC23.12■■□□□ 1.29
TBC1D4O60343 CPT2-209ENST00000636935 803 ntTSL 5 BASIC23.12■■□□□ 1.29
TBC1D4O60343 RAB24-202ENST00000303270 1385 ntTSL 2 BASIC23.12■■□□□ 1.29
TBC1D4O60343 USP36-218ENST00000590546 1771 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
TBC1D4O60343 MAGI2-217ENST00000629359 6704 ntTSL 5 BASIC23.11■■□□□ 1.29
TBC1D4O60343 DACT3-202ENST00000391916 2834 ntAPPRIS P1 TSL 5 BASIC23.11■■□□□ 1.29
TBC1D4O60343 MTMR14-202ENST00000351233 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC23.11■■□□□ 1.29
TBC1D4O60343 POLDIP2-201ENST00000540200 2121 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
TBC1D4O60343 SPINT2-201ENST00000301244 1802 ntAPPRIS P2 TSL 1 (best) BASIC23.11■■□□□ 1.29
TBC1D4O60343 NFKBIB-201ENST00000313582 1159 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
TBC1D4O60343 BCKDHB-203ENST00000369760 743 ntTSL 3 BASIC23.11■■□□□ 1.29
TBC1D4O60343 AC099681.3-201ENST00000421500 939 ntTSL 4 BASIC23.11■■□□□ 1.29
TBC1D4O60343 IDNK-204ENST00000454393 1210 ntTSL 3 BASIC23.11■■□□□ 1.29
TBC1D4O60343 GALNS-213ENST00000569433 723 ntTSL 3 BASIC23.11■■□□□ 1.29
TBC1D4O60343 FOSL1-201ENST00000312562 1669 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
TBC1D4O60343 ASL-203ENST00000380839 1765 ntTSL 5 BASIC23.11■■□□□ 1.29
TBC1D4O60343 ACTL10-201ENST00000330271 2028 ntAPPRIS P1 BASIC23.11■■□□□ 1.29
TBC1D4O60343 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
TBC1D4O60343 FAM136A-201ENST00000037869 1810 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
TBC1D4O60343 IKZF1-207ENST00000413698 1808 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
TBC1D4O60343 DCAF15-201ENST00000254337 2278 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
TBC1D4O60343 RASL12-202ENST00000421977 1523 ntTSL 2 BASIC23.1■■□□□ 1.29
TBC1D4O60343 PLD4-201ENST00000392593 6515 ntAPPRIS P3 TSL 1 (best) BASIC23.1■■□□□ 1.29
TBC1D4O60343 AC006015.1-201ENST00000429970 570 ntBASIC23.1■■□□□ 1.29
TBC1D4O60343 AP003071.3-201ENST00000562506 366 ntTSL 3 BASIC23.1■■□□□ 1.29
TBC1D4O60343 AC127029.2-201ENST00000577329 502 ntTSL 3 BASIC23.1■■□□□ 1.29
TBC1D4O60343 TRIM2-212ENST00000632856 656 ntTSL 3 BASIC23.1■■□□□ 1.29
TBC1D4O60343 VGLL2-201ENST00000326274 2212 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
TBC1D4O60343 ADAP2-204ENST00000580525 1598 ntAPPRIS ALT2 TSL 1 (best) BASIC23.1■■□□□ 1.29
TBC1D4O60343 CYS1-201ENST00000381813 2738 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
TBC1D4O60343 AC004854.2-201ENST00000608450 1441 ntBASIC23.09■■□□□ 1.29
TBC1D4O60343 IDH2-203ENST00000559482 1278 ntTSL 5 BASIC23.09■■□□□ 1.29
TBC1D4O60343 VPS53-216ENST00000574029 585 ntTSL 4 BASIC23.09■■□□□ 1.29
TBC1D4O60343 PREB-201ENST00000260643 2166 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
TBC1D4O60343 JSRP1-201ENST00000300961 1138 ntAPPRIS P1 TSL 2 BASIC23.08■■□□□ 1.29
TBC1D4O60343 COX20-201ENST00000366528 568 ntTSL 2 BASIC23.08■■□□□ 1.29
TBC1D4O60343 ADAMTS13-204ENST00000371911 1155 ntTSL 1 (best) BASIC23.08■■□□□ 1.29
TBC1D4O60343 PPA1-202ENST00000373232 1295 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
TBC1D4O60343 TMCC2-209ENST00000637895 1455 ntTSL 1 (best) BASIC23.08■■□□□ 1.29
TBC1D4O60343 AKT1-203ENST00000407796 2710 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.28
TBC1D4O60343 AC138649.1-201ENST00000619611 1449 ntTSL 1 (best) BASIC23.08■■□□□ 1.28
TBC1D4O60343 ADGRA2-202ENST00000412232 5651 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
TBC1D4O60343 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC23.07■■□□□ 1.28
TBC1D4O60343 NOXA1-202ENST00000392815 1464 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
TBC1D4O60343 CDC16-203ENST00000356221 2203 ntAPPRIS P3 TSL 1 (best) BASIC23.07■■□□□ 1.28
TBC1D4O60343 ID1-201ENST00000376105 1233 ntBASIC23.07■■□□□ 1.28
TBC1D4O60343 AC140479.5-201ENST00000568189 735 ntTSL 3 BASIC23.07■■□□□ 1.28
TBC1D4O60343 NKIRAS2-206ENST00000393885 1909 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
TBC1D4O60343 HOXA4-201ENST00000360046 1747 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
TBC1D4O60343 TUBG1-201ENST00000251413 1611 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
TBC1D4O60343 HNF4A-205ENST00000443598 1603 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
TBC1D4O60343 PRSS56-201ENST00000449534 2157 ntAPPRIS ALT2 TSL 5 BASIC23.07■■□□□ 1.28
TBC1D4O60343 PRSS56-203ENST00000617714 2158 ntAPPRIS P2 TSL 5 BASIC23.07■■□□□ 1.28
TBC1D4O60343 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
TBC1D4O60343 NKX2-3-202ENST00000622383 1986 ntTSL 5 BASIC23.07■■□□□ 1.28
TBC1D4O60343 EID2B-201ENST00000326282 1865 ntAPPRIS P1 BASIC23.07■■□□□ 1.28
TBC1D4O60343 PURG-202ENST00000475541 2875 ntAPPRIS P1 BASIC23.07■■□□□ 1.28
TBC1D4O60343 IGSF21-201ENST00000251296 1943 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
TBC1D4O60343 CERKL-204ENST00000374970 1392 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
TBC1D4O60343 NR2F6-201ENST00000291442 2404 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
TBC1D4O60343 AP002748.1-201ENST00000504911 580 ntTSL 3 BASIC23.06■■□□□ 1.28
TBC1D4O60343 TMEM230-210ENST00000612323 1231 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
TBC1D4O60343 AL032819.3-201ENST00000640283 925 ntAPPRIS P1 TSL 5 BASIC23.06■■□□□ 1.28
TBC1D4O60343 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC23.06■■□□□ 1.28
TBC1D4O60343 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC23.06■■□□□ 1.28
TBC1D4O60343 TMEM44-211ENST00000473092 1508 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
TBC1D4O60343 STAP2-206ENST00000600324 1508 ntAPPRIS P3 TSL 2 BASIC23.06■■□□□ 1.28
TBC1D4O60343 PTH1R-207ENST00000449590 2123 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
TBC1D4O60343 ZFAND6-224ENST00000618205 1659 ntAPPRIS P1 TSL 5 BASIC23.06■■□□□ 1.28
TBC1D4O60343 CDC16-206ENST00000375310 2156 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
TBC1D4O60343 TMSB15B-202ENST00000436583 2186 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
TBC1D4O60343 MFSD7-201ENST00000322224 2123 ntAPPRIS P3 TSL 1 (best) BASIC23.05■■□□□ 1.28
TBC1D4O60343 TMEM54-202ENST00000373463 999 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
TBC1D4O60343 AL355102.2-201ENST00000553811 600 ntAPPRIS P1 TSL 2 BASIC23.05■■□□□ 1.28
TBC1D4O60343 PEBP1-201ENST00000261313 1697 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
TBC1D4O60343 EML2-209ENST00000587152 2763 ntAPPRIS ALT2 TSL 2 BASIC23.05■■□□□ 1.28
TBC1D4O60343 SLC9A3-201ENST00000264938 2584 ntAPPRIS P3 TSL 1 (best) BASIC23.04■■□□□ 1.28
TBC1D4O60343 SDR39U1-208ENST00000554698 1364 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
TBC1D4O60343 EMC7-201ENST00000256545 1155 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
TBC1D4O60343 STX7-201ENST00000367937 1090 ntTSL 5 BASIC23.04■■□□□ 1.28
TBC1D4O60343 LRRC3C-201ENST00000377924 891 ntAPPRIS P1 TSL 3 BASIC23.04■■□□□ 1.28
TBC1D4O60343 NRL-201ENST00000396995 810 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
TBC1D4O60343 AP001363.2-201ENST00000538101 391 ntTSL 3 BASIC23.04■■□□□ 1.28
TBC1D4O60343 HSD17B14-204ENST00000599157 991 ntTSL 3 BASIC23.04■■□□□ 1.28
TBC1D4O60343 MCUB-201ENST00000394650 2278 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
TBC1D4O60343 SRPK3-204ENST00000370108 1863 ntAPPRIS ALT2 TSL 5 BASIC23.04■■□□□ 1.28
TBC1D4O60343 PCOLCE2-201ENST00000295992 2021 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
TBC1D4O60343 ZDHHC7-203ENST00000564466 1488 ntTSL 5 BASIC23.04■■□□□ 1.28
TBC1D4O60343 SAXO1-201ENST00000380530 1727 ntAPPRIS ALT2 TSL 2 BASIC23.03■■□□□ 1.28
TBC1D4O60343 GOLGA6L9-202ENST00000618348 1710 ntAPPRIS P1 TSL 5 BASIC23.03■■□□□ 1.28
TBC1D4O60343 SOCS1-201ENST00000332029 1225 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
TBC1D4O60343 LTC4S-202ENST00000401985 486 ntTSL 3 BASIC23.03■■□□□ 1.28
Retrieved 100 of 98,524 protein–RNA pairs in 18.9 ms