Protein–RNA interactions for Protein: O43639

NCK2, Cytoplasmic protein NCK2, humanhuman

Predictions only

Length 380 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCK2O43639 HOXB7-201ENST00000239165 1371 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
NCK2O43639 KCNN1-204ENST00000615435 1691 ntAPPRIS ALT1 TSL 5 BASIC23.98■■□□□ 1.43
NCK2O43639 PON2-218ENST00000633531 1653 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
NCK2O43639 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC23.98■■□□□ 1.43
NCK2O43639 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC23.98■■□□□ 1.43
NCK2O43639 LRRC75A-201ENST00000409083 2656 ntAPPRIS P3 TSL 2 BASIC23.97■■□□□ 1.43
NCK2O43639 B3GAT3-201ENST00000265471 1641 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
NCK2O43639 NIPA2-203ENST00000398013 2280 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
NCK2O43639 DCAF4-206ENST00000509153 1521 ntAPPRIS ALT2 TSL 2 BASIC23.97■■□□□ 1.43
NCK2O43639 ZFYVE28-207ENST00000509171 1135 ntTSL 2 BASIC23.97■■□□□ 1.43
NCK2O43639 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC23.97■■□□□ 1.43
NCK2O43639 C12orf75-208ENST00000612117 1329 ntTSL 1 (best) BASIC23.97■■□□□ 1.43
NCK2O43639 STK32C-201ENST00000298630 2086 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
NCK2O43639 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC23.96■■□□□ 1.43
NCK2O43639 MLNR-201ENST00000218721 1239 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
NCK2O43639 SLC35A2-205ENST00000376529 865 ntTSL 3 BASIC23.96■■□□□ 1.43
NCK2O43639 IL15RA-201ENST00000379971 588 ntTSL 3 BASIC23.96■■□□□ 1.43
NCK2O43639 DPEP2-204ENST00000572888 2112 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
NCK2O43639 PLEKHA8-208ENST00000622102 2140 ntTSL 5 BASIC23.96■■□□□ 1.43
NCK2O43639 IMPDH1-210ENST00000480861 1765 ntAPPRIS P2 TSL 2 BASIC23.96■■□□□ 1.43
NCK2O43639 MYBL1-201ENST00000517885 1714 ntTSL 5 BASIC23.96■■□□□ 1.43
NCK2O43639 CCKBR-206ENST00000532715 1734 ntTSL 3 BASIC23.96■■□□□ 1.43
NCK2O43639 NHLH1-201ENST00000302101 2563 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
NCK2O43639 EI24-204ENST00000527235 1625 ntTSL 5 BASIC23.95■■□□□ 1.43
NCK2O43639 SRSF11-203ENST00000370951 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC23.95■■□□□ 1.43
NCK2O43639 LINC02228-203ENST00000641970 1355 ntBASIC23.95■■□□□ 1.42
NCK2O43639 KCNQ4-204ENST00000509682 1926 ntAPPRIS ALT2 TSL 5 BASIC23.95■■□□□ 1.42
NCK2O43639 C5orf38-201ENST00000334000 890 ntAPPRIS P3 TSL 1 (best) BASIC23.95■■□□□ 1.42
NCK2O43639 PRKCQ-AS1-204ENST00000455810 920 ntTSL 2 BASIC23.95■■□□□ 1.42
NCK2O43639 NKILA-201ENST00000613231 537 ntTSL 4 BASIC23.95■■□□□ 1.42
NCK2O43639 SLC35A3-213ENST00000638988 1286 ntTSL 5 BASIC23.95■■□□□ 1.42
NCK2O43639 CHADL-201ENST00000216241 2533 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.42
NCK2O43639 C2orf72-201ENST00000373640 3657 ntAPPRIS P1 TSL 2 BASIC23.95■■□□□ 1.42
NCK2O43639 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC23.95■■□□□ 1.42
NCK2O43639 FAM72A-202ENST00000367128 2398 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.42
NCK2O43639 FAM72D-201ENST00000400889 2397 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.42
NCK2O43639 ZNF444-201ENST00000337080 2042 ntAPPRIS P3 TSL 1 (best) BASIC23.94■■□□□ 1.42
NCK2O43639 DCAF8-211ENST00000475733 1426 ntTSL 1 (best) BASIC23.94■■□□□ 1.42
NCK2O43639 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
NCK2O43639 BARHL1-201ENST00000263610 2341 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
NCK2O43639 P4HA2-202ENST00000360568 2313 ntAPPRIS ALT1 TSL 1 (best) BASIC23.94■■□□□ 1.42
NCK2O43639 PRKACA-201ENST00000308677 2677 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
NCK2O43639 BIN1-202ENST00000316724 2693 ntAPPRIS P4 TSL 1 (best) BASIC23.94■■□□□ 1.42
NCK2O43639 CBWD1-203ENST00000377400 1792 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
NCK2O43639 TTC34-202ENST00000637179 1775 ntAPPRIS P2 TSL 5 BASIC23.94■■□□□ 1.42
NCK2O43639 IRX2-202ENST00000382611 2630 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
NCK2O43639 TAF9-201ENST00000217893 1283 ntAPPRIS P2 TSL 1 (best) BASIC23.94■■□□□ 1.42
NCK2O43639 KRT18P14-201ENST00000534205 1250 ntBASIC23.94■■□□□ 1.42
NCK2O43639 SSPN-204ENST00000535504 419 ntTSL 1 (best) BASIC23.94■■□□□ 1.42
NCK2O43639 GNAO1-211ENST00000570235 568 ntTSL 2 BASIC23.94■■□□□ 1.42
NCK2O43639 AC007773.1-201ENST00000592680 972 ntTSL 2 BASIC23.94■■□□□ 1.42
NCK2O43639 TMEM191B-201ENST00000612978 1220 ntAPPRIS P2 TSL 5 BASIC23.94■■□□□ 1.42
NCK2O43639 AL032819.3-201ENST00000640283 925 ntAPPRIS P1 TSL 5 BASIC23.94■■□□□ 1.42
NCK2O43639 ENTPD4-201ENST00000356206 2097 ntTSL 1 (best) BASIC23.94■■□□□ 1.42
NCK2O43639 ENTPD4-203ENST00000417069 2063 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
NCK2O43639 PLPP1-202ENST00000307259 1597 ntAPPRIS ALT1 TSL 1 (best) BASIC23.94■■□□□ 1.42
NCK2O43639 LINC00526-201ENST00000581067 1875 ntBASIC23.94■■□□□ 1.42
NCK2O43639 RNF39-201ENST00000244360 2206 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
NCK2O43639 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC23.94■■□□□ 1.42
NCK2O43639 SPINT2-201ENST00000301244 1802 ntAPPRIS P2 TSL 1 (best) BASIC23.94■■□□□ 1.42
NCK2O43639 KRTAP5-7-201ENST00000398536 1408 ntAPPRIS P1 BASIC23.93■■□□□ 1.42
NCK2O43639 LSR-203ENST00000360798 1963 ntTSL 2 BASIC23.93■■□□□ 1.42
NCK2O43639 SNRNP70-201ENST00000221448 1603 ntTSL 2 BASIC23.93■■□□□ 1.42
NCK2O43639 TTLL1-201ENST00000266254 1645 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
NCK2O43639 HLA-L-209ENST00000420110 1011 ntBASIC23.93■■□□□ 1.42
NCK2O43639 FGF12-AS2-201ENST00000443165 580 ntTSL 4 BASIC23.93■■□□□ 1.42
NCK2O43639 TMEM41B-205ENST00000533723 723 ntTSL 2 BASIC23.93■■□□□ 1.42
NCK2O43639 GRIN2D-201ENST00000263269 5093 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
NCK2O43639 ST7L-221ENST00000490067 1780 ntTSL 1 (best) BASIC23.93■■□□□ 1.42
NCK2O43639 P2RX4-211ENST00000543171 1777 ntTSL 5 BASIC23.93■■□□□ 1.42
NCK2O43639 SPANXA2-OT1-201ENST00000622372 1686 ntTSL 2 BASIC23.92■■□□□ 1.42
NCK2O43639 HAUS7-202ENST00000370211 1363 ntAPPRIS P2 TSL 1 (best) BASIC23.92■■□□□ 1.42
NCK2O43639 FAM83D-202ENST00000619850 2361 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
NCK2O43639 TPST2-203ENST00000403880 2084 ntAPPRIS P1 TSL 5 BASIC23.92■■□□□ 1.42
NCK2O43639 TERF1P2-201ENST00000583350 1212 ntBASIC23.92■■□□□ 1.42
NCK2O43639 LGI4-206ENST00000591633 1113 ntTSL 1 (best) BASIC23.92■■□□□ 1.42
NCK2O43639 DISC1-224ENST00000639374 1071 ntAPPRIS ALT2 TSL 1 (best) BASIC23.92■■□□□ 1.42
NCK2O43639 GAL3ST1-202ENST00000401975 1791 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
NCK2O43639 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC23.91■■□□□ 1.42
NCK2O43639 AF117829.1-201ENST00000519655 1398 ntTSL 5 BASIC23.91■■□□□ 1.42
NCK2O43639 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
NCK2O43639 IQSEC3-201ENST00000382841 2701 ntAPPRIS P3 TSL 2 BASIC23.91■■□□□ 1.42
NCK2O43639 SKIDA1-201ENST00000444772 2667 ntAPPRIS ALT2 TSL 5 BASIC23.91■■□□□ 1.42
NCK2O43639 GTSE1-AS1-202ENST00000623117 1518 ntBASIC23.91■■□□□ 1.42
NCK2O43639 RAD9A-201ENST00000307980 2119 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
NCK2O43639 RASGRP2-203ENST00000377486 667 ntTSL 3 BASIC23.91■■□□□ 1.42
NCK2O43639 POLR2H-204ENST00000438240 994 ntTSL 3 BASIC23.91■■□□□ 1.42
NCK2O43639 MIR6084-201ENST00000622012 110 ntBASIC23.91■■□□□ 1.42
NCK2O43639 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC23.91■■□□□ 1.42
NCK2O43639 TMEM200B-202ENST00000521452 2501 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
NCK2O43639 UBTF-213ENST00000533177 3011 ntTSL 5 BASIC23.91■■□□□ 1.42
NCK2O43639 TMEM200B-201ENST00000420504 2553 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
NCK2O43639 C7orf26-202ENST00000359073 1762 ntTSL 1 (best) BASIC23.91■■□□□ 1.42
NCK2O43639 C1QTNF1-207ENST00000580454 1396 ntAPPRIS P1 TSL 5 BASIC23.91■■□□□ 1.42
NCK2O43639 ADORA2B-201ENST00000304222 1735 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
NCK2O43639 MSANTD3-207ENST00000622639 1748 ntAPPRIS P1 TSL 3 BASIC23.9■■□□□ 1.42
NCK2O43639 TRAM2-AS1-204ENST00000606714 2453 ntTSL 2 BASIC23.9■■□□□ 1.42
NCK2O43639 TBC1D22A-202ENST00000355704 1886 ntTSL 1 (best) BASIC23.9■■□□□ 1.42
NCK2O43639 TRAF4-205ENST00000444415 1456 ntTSL 5 BASIC23.9■■□□□ 1.42
NCK2O43639 NRSN1-204ENST00000378491 2354 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
Retrieved 100 of 98,524 protein–RNA pairs in 34.1 ms