Protein–RNA interactions for Protein: O15353

FOXN1, Forkhead box protein N1, humanhuman

Predictions only

Length 648 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN1O15353 CPNE2-202ENST00000535318 2316 ntAPPRIS P1 TSL 1 (best) BASIC26.08■■□□□ 1.76
FOXN1O15353 GFOD1-204ENST00000603223 2388 ntTSL 2 BASIC26.07■■□□□ 1.76
FOXN1O15353 GET4-201ENST00000265857 2090 ntAPPRIS P2 TSL 1 (best) BASIC26.07■■□□□ 1.76
FOXN1O15353 AK8-201ENST00000298545 2072 ntAPPRIS P1 TSL 1 (best) BASIC26.07■■□□□ 1.76
FOXN1O15353 PTRH1-201ENST00000335223 759 ntTSL 1 (best) BASIC26.07■■□□□ 1.76
FOXN1O15353 MLLT10-204ENST00000377091 905 ntTSL 1 (best) BASIC26.07■■□□□ 1.76
FOXN1O15353 NUDT14-202ENST00000392568 845 ntAPPRIS P1 TSL 1 (best) BASIC26.07■■□□□ 1.76
FOXN1O15353 RAB6A-204ENST00000536566 1267 ntTSL 5 BASIC26.07■■□□□ 1.76
FOXN1O15353 HSD17B14-204ENST00000599157 991 ntTSL 3 BASIC26.07■■□□□ 1.76
FOXN1O15353 PARD6A-203ENST00000602551 1171 ntTSL 5 BASIC26.07■■□□□ 1.76
FOXN1O15353 CBWD1-203ENST00000377400 1792 ntAPPRIS P1 TSL 1 (best) BASIC26.07■■□□□ 1.76
FOXN1O15353 PLPP1-202ENST00000307259 1597 ntAPPRIS ALT1 TSL 1 (best) BASIC26.07■■□□□ 1.76
FOXN1O15353 VDAC2-203ENST00000332211 1557 ntAPPRIS P1 TSL 1 (best) BASIC26.07■■□□□ 1.76
FOXN1O15353 CDIPT-207ENST00000566113 1671 ntTSL 2 BASIC26.06■■□□□ 1.76
FOXN1O15353 ZNF205-201ENST00000219091 1947 ntAPPRIS P1 TSL 5 BASIC26.06■■□□□ 1.76
FOXN1O15353 MATK-204ENST00000585778 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC26.06■■□□□ 1.76
FOXN1O15353 MRPL12-201ENST00000333676 1028 ntAPPRIS P1 TSL 1 (best) BASIC26.06■■□□□ 1.76
FOXN1O15353 ZNF295-AS1-201ENST00000412906 952 ntTSL 1 (best) BASIC26.06■■□□□ 1.76
FOXN1O15353 AC073210.2-201ENST00000430369 194 ntBASIC26.06■■□□□ 1.76
FOXN1O15353 NDUFB2-203ENST00000461457 559 ntTSL 3 BASIC26.06■■□□□ 1.76
FOXN1O15353 ARSB-202ENST00000396151 2316 ntTSL 1 (best) BASIC26.06■■□□□ 1.76
FOXN1O15353 BTBD7-205ENST00000554565 2697 ntTSL 1 (best) BASIC26.06■■□□□ 1.76
FOXN1O15353 BOP1-205ENST00000569669 2303 ntAPPRIS P1 TSL 1 (best) BASIC26.05■■□□□ 1.76
FOXN1O15353 BBC3-202ENST00000341983 1538 ntTSL 1 (best) BASIC26.05■■□□□ 1.76
FOXN1O15353 KANSL1-AS1-201ENST00000398275 517 ntTSL 1 (best) BASIC26.05■■□□□ 1.76
FOXN1O15353 SLC26A1-203ENST00000398520 1111 ntTSL 1 (best) BASIC26.05■■□□□ 1.76
FOXN1O15353 GCSHP5-201ENST00000443090 522 ntBASIC26.05■■□□□ 1.76
FOXN1O15353 GALNS-211ENST00000568311 703 ntTSL 1 (best) BASIC26.05■■□□□ 1.76
FOXN1O15353 SIN3B-209ENST00000596802 2556 ntTSL 1 (best) BASIC26.05■■□□□ 1.76
FOXN1O15353 SLC25A29-201ENST00000359232 2385 ntAPPRIS P1 TSL 1 (best) BASIC26.05■■□□□ 1.76
FOXN1O15353 PHC2-202ENST00000373418 2550 ntAPPRIS ALT2 TSL 1 (best) BASIC26.04■■□□□ 1.76
FOXN1O15353 DLK2-202ENST00000372485 1572 ntAPPRIS ALT1 TSL 5 BASIC26.04■■□□□ 1.76
FOXN1O15353 AMZ2-202ENST00000359904 2402 ntAPPRIS P1 TSL 2 BASIC26.04■■□□□ 1.76
FOXN1O15353 CCDC96-201ENST00000310085 2091 ntAPPRIS P1 BASIC26.04■■□□□ 1.76
FOXN1O15353 RNA5SP413-201ENST00000516373 109 ntBASIC26.04■■□□□ 1.76
FOXN1O15353 AC005181.1-201ENST00000604782 1256 ntBASIC26.04■■□□□ 1.76
FOXN1O15353 AC010331.1-201ENST00000611423 582 ntBASIC26.04■■□□□ 1.76
FOXN1O15353 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC26.04■■□□□ 1.76
FOXN1O15353 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC26.04■■□□□ 1.76
FOXN1O15353 LINC02043-201ENST00000419745 1832 ntTSL 2 BASIC26.04■■□□□ 1.76
FOXN1O15353 TOR2A-201ENST00000336067 1370 ntTSL 2 BASIC26.04■■□□□ 1.76
FOXN1O15353 OSCAR-205ENST00000359649 1892 ntAPPRIS P4 TSL 2 BASIC26.04■■□□□ 1.76
FOXN1O15353 MRPL37-202ENST00000360840 1483 ntAPPRIS P1 TSL 1 (best) BASIC26.04■■□□□ 1.76
FOXN1O15353 RARA-204ENST00000394089 2024 ntAPPRIS P1 TSL 2 BASIC26.04■■□□□ 1.76
FOXN1O15353 ZBTB10-204ENST00000455036 5458 ntAPPRIS P3 TSL 2 BASIC26.03■■□□□ 1.76
FOXN1O15353 MFF-208ENST00000409616 1247 ntTSL 5 BASIC26.03■■□□□ 1.76
FOXN1O15353 HOXD9-201ENST00000249499 1870 ntAPPRIS P1 TSL 1 (best) BASIC26.02■■□□□ 1.76
FOXN1O15353 ARFIP2-202ENST00000396777 1868 ntAPPRIS P1 TSL 2 BASIC26.02■■□□□ 1.76
FOXN1O15353 KLC1-201ENST00000246489 2294 ntAPPRIS P1 TSL 5 BASIC26.02■■□□□ 1.76
FOXN1O15353 KLC1-224ENST00000557450 2265 ntTSL 5 BASIC26.02■■□□□ 1.76
FOXN1O15353 CBR1-201ENST00000290349 1293 ntAPPRIS P1 TSL 1 (best) BASIC26.02■■□□□ 1.76
FOXN1O15353 SBK2-201ENST00000344158 1056 ntAPPRIS P1 TSL 2 BASIC26.02■■□□□ 1.76
FOXN1O15353 KHDC3L-201ENST00000370367 1018 ntAPPRIS P1 TSL 1 (best) BASIC26.02■■□□□ 1.76
FOXN1O15353 SLC35A2-202ENST00000376512 903 ntTSL 2 BASIC26.02■■□□□ 1.76
FOXN1O15353 SBK2-202ENST00000413299 1085 ntAPPRIS P1 TSL 5 BASIC26.02■■□□□ 1.76
FOXN1O15353 PSME3-210ENST00000590720 998 ntAPPRIS P1 TSL 1 (best) BASIC26.02■■□□□ 1.76
FOXN1O15353 CAMK2N1-201ENST00000375078 2336 ntAPPRIS P1 TSL 1 (best) BASIC26.02■■□□□ 1.76
FOXN1O15353 CNTFR-201ENST00000351266 1910 ntAPPRIS P1 TSL 1 (best) BASIC26.01■■□□□ 1.75
FOXN1O15353 ZFAND4-205ENST00000374371 2283 ntTSL 5 BASIC26.01■■□□□ 1.75
FOXN1O15353 CALML5-201ENST00000380332 859 ntAPPRIS P1 BASIC26.01■■□□□ 1.75
FOXN1O15353 ARL5A-202ENST00000428992 747 ntTSL 2 BASIC26.01■■□□□ 1.75
FOXN1O15353 SNHG6-203ENST00000520944 638 ntTSL 1 (best) BASIC26.01■■□□□ 1.75
FOXN1O15353 ACBD4-214ENST00000591859 1998 ntTSL 1 (best) BASIC26.01■■□□□ 1.75
FOXN1O15353 PTH1R-207ENST00000449590 2123 ntAPPRIS P1 TSL 1 (best) BASIC26■■□□□ 1.75
FOXN1O15353 SPIRE1-203ENST00000410092 5533 ntAPPRIS P3 TSL 1 (best) BASIC26■■□□□ 1.75
FOXN1O15353 EVX1-201ENST00000222761 1500 ntTSL 1 (best) BASIC26■■□□□ 1.75
FOXN1O15353 VIL1-204ENST00000440053 1454 ntTSL 1 (best) BASIC26■■□□□ 1.75
FOXN1O15353 C2orf82-201ENST00000331342 465 ntAPPRIS P2 TSL 1 (best) BASIC26■■□□□ 1.75
FOXN1O15353 TMEM54-202ENST00000373463 999 ntAPPRIS P1 TSL 1 (best) BASIC26■■□□□ 1.75
FOXN1O15353 CCDC107-202ENST00000378406 1016 ntAPPRIS ALT2 TSL 2 BASIC26■■□□□ 1.75
FOXN1O15353 AC007040.1-201ENST00000416229 477 ntTSL 3 BASIC26■■□□□ 1.75
FOXN1O15353 EIF5A-205ENST00000419711 1271 ntAPPRIS P1 TSL 1 (best) BASIC26■■□□□ 1.75
FOXN1O15353 CCDC107-206ENST00000426546 1242 ntAPPRIS P3 TSL 1 (best) BASIC26■■□□□ 1.75
FOXN1O15353 AC231657.2-201ENST00000624556 255 ntBASIC26■■□□□ 1.75
FOXN1O15353 CSNK1G3-207ENST00000512718 1569 ntTSL 2 BASIC25.99■■□□□ 1.75
FOXN1O15353 AC133637.1-201ENST00000624115 1537 ntBASIC25.99■■□□□ 1.75
FOXN1O15353 NPAS1-208ENST00000602212 2117 ntAPPRIS P1 TSL 1 (best) BASIC25.99■■□□□ 1.75
FOXN1O15353 KRTAP17-1-201ENST00000334202 779 ntAPPRIS P1 BASIC25.99■■□□□ 1.75
FOXN1O15353 ARHGAP24-206ENST00000503995 1273 ntTSL 1 (best) BASIC25.99■■□□□ 1.75
FOXN1O15353 C17orf107-202ENST00000521575 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC25.99■■□□□ 1.75
FOXN1O15353 ADD3-AS1-204ENST00000627565 388 ntTSL 3 BASIC25.99■■□□□ 1.75
FOXN1O15353 FRMD8-203ENST00000416776 1818 ntTSL 2 BASIC25.99■■□□□ 1.75
FOXN1O15353 AGAP3-201ENST00000335367 2675 ntTSL 1 (best) BASIC25.99■■□□□ 1.75
FOXN1O15353 PON2-217ENST00000633192 1876 ntTSL 1 (best) BASIC25.98■■□□□ 1.75
FOXN1O15353 HYAL2-207ENST00000442581 2318 ntAPPRIS P1 TSL 2 BASIC25.98■■□□□ 1.75
FOXN1O15353 PYURF-201ENST00000273968 1361 ntAPPRIS P1 TSL 1 (best) BASIC25.98■■□□□ 1.75
FOXN1O15353 CBWD2-201ENST00000259199 1812 ntAPPRIS P3 TSL 1 (best) BASIC25.98■■□□□ 1.75
FOXN1O15353 ANKRD54-201ENST00000215941 2184 ntAPPRIS P1 TSL 1 (best) BASIC25.98■■□□□ 1.75
FOXN1O15353 UNC50-204ENST00000409975 2172 ntTSL 1 (best) BASIC25.98■■□□□ 1.75
FOXN1O15353 SERF1A-201ENST00000317633 963 ntAPPRIS P1 TSL 1 (best) BASIC25.98■■□□□ 1.75
FOXN1O15353 FAM210CP-201ENST00000445714 574 ntBASIC25.98■■□□□ 1.75
FOXN1O15353 LRRC75A-AS1-202ENST00000470491 1057 ntTSL 1 (best) BASIC25.98■■□□□ 1.75
FOXN1O15353 AP002748.1-201ENST00000504911 580 ntTSL 3 BASIC25.98■■□□□ 1.75
FOXN1O15353 FMR1-AS1_2.1-201ENST00000613724 127 ntBASIC25.98■■□□□ 1.75
FOXN1O15353 BCL2L12-212ENST00000616144 1854 ntAPPRIS P3 TSL 1 (best) BASIC25.98■■□□□ 1.75
FOXN1O15353 ACTR1B-201ENST00000289228 2243 ntAPPRIS P1 TSL 1 (best) BASIC25.98■■□□□ 1.75
FOXN1O15353 RYK-209ENST00000623711 2934 ntAPPRIS ALT2 TSL 1 (best) BASIC25.98■■□□□ 1.75
FOXN1O15353 DAZAP1-201ENST00000233078 2160 ntAPPRIS P2 TSL 1 (best) BASIC25.97■■□□□ 1.75
FOXN1O15353 KCNS1-202ENST00000537075 2136 ntAPPRIS P1 TSL 1 (best) BASIC25.97■■□□□ 1.75
FOXN1O15353 AC133561.1-201ENST00000568600 2415 ntBASIC25.97■■□□□ 1.75
Retrieved 100 of 98,524 protein–RNA pairs in 20 ms