Protein–RNA interactions for Protein: O14647

CHD2, Chromodomain-helicase-DNA-binding protein 2, humanhuman

Known RBP Predictions only

Length 1,828 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD2O14647 PTX3-201ENST00000295927 1940 ntAPPRIS P1 TSL 1 (best) BASIC30.79■■■□□ 2.52
CHD2O14647 ABL2-203ENST00000392043 2140 ntTSL 1 (best) BASIC30.79■■■□□ 2.52
CHD2O14647 DLEU2-203ENST00000425586 1267 ntTSL 1 (best) BASIC30.79■■■□□ 2.52
CHD2O14647 LIMD2-206ENST00000578993 602 ntTSL 3 BASIC30.79■■■□□ 2.52
CHD2O14647 PET100-202ENST00000594797 719 ntAPPRIS P1 TSL 1 (best) BASIC30.79■■■□□ 2.52
CHD2O14647 PDLIM3-203ENST00000284771 1672 ntAPPRIS P1 TSL 1 (best) BASIC30.79■■■□□ 2.52
CHD2O14647 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC30.78■■■□□ 2.52
CHD2O14647 PPP1CA-202ENST00000358239 1054 ntTSL 2 BASIC30.78■■■□□ 2.52
CHD2O14647 FNDC11-201ENST00000370097 1119 ntAPPRIS P1 TSL 2 BASIC30.78■■■□□ 2.52
CHD2O14647 MAGIX-202ENST00000595224 1238 ntAPPRIS P2 TSL 5 BASIC30.78■■■□□ 2.52
CHD2O14647 AC010536.3-201ENST00000620306 533 ntBASIC30.78■■■□□ 2.52
CHD2O14647 LMO2-201ENST00000257818 2294 ntTSL 1 (best) BASIC30.78■■■□□ 2.52
CHD2O14647 NAPA-201ENST00000263354 1839 ntAPPRIS P1 TSL 1 (best) BASIC30.78■■■□□ 2.52
CHD2O14647 IPO13-201ENST00000372339 1201 ntTSL 2 BASIC30.77■■■□□ 2.52
CHD2O14647 WIPF1-207ENST00000410117 777 ntTSL 3 BASIC30.77■■■□□ 2.52
CHD2O14647 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC30.77■■■□□ 2.52
CHD2O14647 SLC2A11-202ENST00000316185 1555 ntTSL 1 (best) BASIC30.77■■■□□ 2.52
CHD2O14647 MAP2K5-204ENST00000395476 1689 ntTSL 1 (best) BASIC30.77■■■□□ 2.52
CHD2O14647 C19orf84-201ENST00000570516 788 ntAPPRIS ALT2 TSL 1 (best) BASIC30.77■■■□□ 2.52
CHD2O14647 VDAC1-203ENST00000395047 1873 ntAPPRIS P1 TSL 1 (best) BASIC30.77■■■□□ 2.52
CHD2O14647 KLC1-225ENST00000557575 2188 ntTSL 5 BASIC30.76■■■□□ 2.52
CHD2O14647 OXCT2P1-201ENST00000447263 1535 ntBASIC30.76■■■□□ 2.52
CHD2O14647 KISS1R-201ENST00000234371 1625 ntAPPRIS P1 TSL 1 (best) BASIC30.76■■■□□ 2.52
CHD2O14647 ABHD12B-201ENST00000337334 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC30.76■■■□□ 2.51
CHD2O14647 DCTN3-202ENST00000341694 899 ntTSL 1 (best) BASIC30.76■■■□□ 2.51
CHD2O14647 HBM-201ENST00000356815 506 ntAPPRIS P1 TSL 1 (best) BASIC30.76■■■□□ 2.51
CHD2O14647 DCTN3-205ENST00000378916 773 ntTSL 2 BASIC30.76■■■□□ 2.51
CHD2O14647 AC034102.6-201ENST00000550947 559 ntTSL 4 BASIC30.76■■■□□ 2.51
CHD2O14647 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC30.76■■■□□ 2.51
CHD2O14647 TMCC2-209ENST00000637895 1455 ntTSL 1 (best) BASIC30.76■■■□□ 2.51
CHD2O14647 ROGDI-201ENST00000322048 1735 ntAPPRIS P1 TSL 1 (best) BASIC30.76■■■□□ 2.51
CHD2O14647 SNX21-204ENST00000372542 1824 ntAPPRIS P1 TSL 2 BASIC30.75■■■□□ 2.51
CHD2O14647 OIP5-201ENST00000220514 1236 ntAPPRIS P1 TSL 1 (best) BASIC30.75■■■□□ 2.51
CHD2O14647 RAC1-202ENST00000356142 907 ntTSL 1 (best) BASIC30.75■■■□□ 2.51
CHD2O14647 MGST3-205ENST00000367889 1015 ntAPPRIS P1 TSL 1 (best) BASIC30.75■■■□□ 2.51
CHD2O14647 MAGI2-AS3-211ENST00000451809 707 ntTSL 3 BASIC30.75■■■□□ 2.51
CHD2O14647 AC005786.3-201ENST00000589360 565 ntTSL 3 BASIC30.75■■■□□ 2.51
CHD2O14647 ENTPD4-201ENST00000356206 2097 ntTSL 1 (best) BASIC30.75■■■□□ 2.51
CHD2O14647 ENTPD4-203ENST00000417069 2063 ntAPPRIS P1 TSL 1 (best) BASIC30.75■■■□□ 2.51
CHD2O14647 CPLX1-201ENST00000304062 2181 ntAPPRIS P1 TSL 1 (best) BASIC30.75■■■□□ 2.51
CHD2O14647 PLPPR3-201ENST00000359894 2387 ntAPPRIS P3 TSL 1 (best) BASIC30.75■■■□□ 2.51
CHD2O14647 CTBP2-211ENST00000494626 2014 ntAPPRIS P1 TSL 1 (best) BASIC30.75■■■□□ 2.51
CHD2O14647 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC30.75■■■□□ 2.51
CHD2O14647 HDGF-201ENST00000357325 2380 ntAPPRIS P1 TSL 1 (best) BASIC30.75■■■□□ 2.51
CHD2O14647 HRASLS5-201ENST00000301790 1166 ntAPPRIS P3 TSL 1 (best) BASIC30.75■■■□□ 2.51
CHD2O14647 KRT18P20-201ENST00000548986 1279 ntBASIC30.75■■■□□ 2.51
CHD2O14647 SIRT3-202ENST00000524564 1395 ntTSL 2 BASIC30.75■■■□□ 2.51
CHD2O14647 AC010141.2-201ENST00000452426 721 ntBASIC30.74■■■□□ 2.51
CHD2O14647 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC30.74■■■□□ 2.51
CHD2O14647 PTMS-207ENST00000619580 1150 ntAPPRIS P1 TSL 1 (best) BASIC30.74■■■□□ 2.51
CHD2O14647 BX322557.1-202ENST00000400362 1460 ntTSL 1 (best) BASIC30.74■■■□□ 2.51
CHD2O14647 UBE2E3-201ENST00000392415 1347 ntAPPRIS P1 TSL 3 BASIC30.74■■■□□ 2.51
CHD2O14647 KREMEN2-205ENST00000575769 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC30.73■■■□□ 2.51
CHD2O14647 LIMD2-202ENST00000578061 756 ntAPPRIS P1 TSL 2 BASIC30.73■■■□□ 2.51
CHD2O14647 TXNL4A-203ENST00000585474 1185 ntTSL 1 (best) BASIC30.73■■■□□ 2.51
CHD2O14647 AL160396.2-202ENST00000636692 566 ntAPPRIS ALT2 TSL 5 BASIC30.73■■■□□ 2.51
CHD2O14647 HSPB2-201ENST00000304298 1335 ntAPPRIS P1 TSL 1 (best) BASIC30.73■■■□□ 2.51
CHD2O14647 APBA3-201ENST00000316757 2075 ntAPPRIS P1 TSL 1 (best) BASIC30.73■■■□□ 2.51
CHD2O14647 SMNDC1-201ENST00000369592 1110 ntAPPRIS P1 TSL 3 BASIC30.73■■■□□ 2.51
CHD2O14647 SERP1-208ENST00000491660 830 ntTSL 2 BASIC30.73■■■□□ 2.51
CHD2O14647 SNHG6-203ENST00000520944 638 ntTSL 1 (best) BASIC30.73■■■□□ 2.51
CHD2O14647 EIF2AK4-209ENST00000560648 687 ntTSL 3 BASIC30.73■■■□□ 2.51
CHD2O14647 IL34-204ENST00000566361 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC30.73■■■□□ 2.51
CHD2O14647 ARL16-209ENST00000573715 763 ntTSL 3 BASIC30.73■■■□□ 2.51
CHD2O14647 ARL16-211ENST00000576135 694 ntTSL 3 BASIC30.73■■■□□ 2.51
CHD2O14647 AC083880.1-201ENST00000608266 535 ntBASIC30.73■■■□□ 2.51
CHD2O14647 AC013268.1-206ENST00000638368 961 ntBASIC30.73■■■□□ 2.51
CHD2O14647 AC112229.1-201ENST00000639295 961 ntBASIC30.73■■■□□ 2.51
CHD2O14647 C4orf19-202ENST00000381980 1943 ntAPPRIS P1 TSL 1 (best) BASIC30.72■■■□□ 2.51
CHD2O14647 BX088645.1-201ENST00000636699 1728 ntAPPRIS P1 TSL 5 BASIC30.72■■■□□ 2.51
CHD2O14647 CPED1-202ENST00000340646 1056 ntTSL 5 BASIC30.72■■■□□ 2.51
CHD2O14647 UPK3B-203ENST00000394849 1041 ntAPPRIS ALT2 TSL 2 BASIC30.72■■■□□ 2.51
CHD2O14647 EIF4E3-203ENST00000421769 777 ntTSL 1 (best) BASIC30.72■■■□□ 2.51
CHD2O14647 C17orf107-202ENST00000521575 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC30.72■■■□□ 2.51
CHD2O14647 PHB2-213ENST00000546111 858 ntTSL 2 BASIC30.72■■■□□ 2.51
CHD2O14647 AP001160.3-201ENST00000601484 763 ntBASIC30.72■■■□□ 2.51
CHD2O14647 POU2F3-206ENST00000543440 1953 ntAPPRIS P1 TSL 1 (best) BASIC30.71■■■□□ 2.51
CHD2O14647 MYPOP-201ENST00000322217 1890 ntAPPRIS P1 TSL 1 (best) BASIC30.71■■■□□ 2.51
CHD2O14647 PXK-203ENST00000383715 1756 ntTSL 5 BASIC30.71■■■□□ 2.51
CHD2O14647 ESR2-202ENST00000341099 2060 ntAPPRIS P1 TSL 1 (best) BASIC30.71■■■□□ 2.51
CHD2O14647 ADAD2-202ENST00000315906 1995 ntAPPRIS ALT2 TSL 1 (best) BASIC30.71■■■□□ 2.51
CHD2O14647 EPHA8-202ENST00000374644 1802 ntTSL 1 (best) BASIC30.71■■■□□ 2.51
CHD2O14647 ZNF148-203ENST00000468369 1025 ntTSL 1 (best) BASIC30.7■■■□□ 2.51
CHD2O14647 ALKBH6-212ENST00000485128 959 ntTSL 5 BASIC30.7■■■□□ 2.51
CHD2O14647 RARRES2P4-201ENST00000514074 484 ntBASIC30.7■■■□□ 2.51
CHD2O14647 LHX3-201ENST00000371746 2403 ntAPPRIS P1 TSL 1 (best) BASIC30.7■■■□□ 2.51
CHD2O14647 MFSD7-209ENST00000515118 1556 ntTSL 5 BASIC30.7■■■□□ 2.51
CHD2O14647 HAND2-201ENST00000359562 2780 ntAPPRIS P1 TSL 1 (best) BASIC30.7■■■□□ 2.51
CHD2O14647 GABRA5-203ENST00000400081 2761 ntAPPRIS P1 TSL 5 BASIC30.7■■■□□ 2.51
CHD2O14647 PROSER2-205ENST00000622831 1646 ntAPPRIS ALT2 TSL 1 (best) BASIC30.7■■■□□ 2.51
CHD2O14647 AL591684.2-201ENST00000605970 1594 ntTSL 5 BASIC30.7■■■□□ 2.5
CHD2O14647 KCNQ2-201ENST00000344425 1426 ntTSL 1 (best) BASIC30.7■■■□□ 2.5
CHD2O14647 PPP1R14BP2-201ENST00000426284 444 ntBASIC30.7■■■□□ 2.5
CHD2O14647 AC138907.5-202ENST00000569484 235 ntBASIC30.7■■■□□ 2.5
CHD2O14647 MIR222HG-201ENST00000602461 1379 ntTSL 5 BASIC30.69■■■□□ 2.5
CHD2O14647 CCKBR-201ENST00000334619 2121 ntAPPRIS P1 TSL 1 (best) BASIC30.69■■■□□ 2.5
CHD2O14647 RAMP1-202ENST00000403885 650 ntTSL 3 BASIC30.69■■■□□ 2.5
CHD2O14647 SCAMP3-202ENST00000355379 1537 ntTSL 1 (best) BASIC30.69■■■□□ 2.5
CHD2O14647 KRT18P29-201ENST00000397031 1267 ntBASIC30.68■■■□□ 2.5
CHD2O14647 C2orf82-203ENST00000409533 561 ntAPPRIS P2 TSL 4 BASIC30.68■■■□□ 2.5
Retrieved 100 of 98,524 protein–RNA pairs in 20 ms