Protein–RNA interactions for Protein: O00148

DDX39A, ATP-dependent RNA helicase DDX39A, humanhuman

Known RBP Predictions only

Length 427 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39AO00148 KLC1-227ENST00000634686 2229 ntTSL 5 BASIC24.51■■□□□ 1.51
DDX39AO00148 PEX10-204ENST00000507596 1941 ntAPPRIS ALT1 TSL 5 BASIC24.51■■□□□ 1.51
DDX39AO00148 ZNF419-203ENST00000354197 1569 ntTSL 5 BASIC24.51■■□□□ 1.51
DDX39AO00148 TANGO2-210ENST00000432883 2084 ntTSL 2 BASIC24.51■■□□□ 1.51
DDX39AO00148 MOSPD3-202ENST00000379527 1016 ntAPPRIS P1 TSL 5 BASIC24.51■■□□□ 1.51
DDX39AO00148 MFF-208ENST00000409616 1247 ntTSL 5 BASIC24.51■■□□□ 1.51
DDX39AO00148 SAXO1-201ENST00000380530 1727 ntAPPRIS ALT2 TSL 2 BASIC24.51■■□□□ 1.51
DDX39AO00148 DVL3-201ENST00000313143 5254 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
DDX39AO00148 NAPRT-204ENST00000449291 1965 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
DDX39AO00148 CRHR1-202ENST00000314537 2535 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
DDX39AO00148 TMEM44-211ENST00000473092 1508 ntTSL 1 (best) BASIC24.51■■□□□ 1.51
DDX39AO00148 SLAIN1-213ENST00000466548 2637 ntAPPRIS ALT2 TSL 5 BASIC24.5■■□□□ 1.51
DDX39AO00148 GCA-201ENST00000233612 1694 ntTSL 2 BASIC24.5■■□□□ 1.51
DDX39AO00148 PANK2-201ENST00000316562 2280 ntAPPRIS P2 TSL 1 (best) BASIC24.5■■□□□ 1.51
DDX39AO00148 MAF-202ENST00000393350 6384 ntAPPRIS ALT2 BASIC24.5■■□□□ 1.51
DDX39AO00148 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC24.5■■□□□ 1.51
DDX39AO00148 DUX4L2-201ENST00000561772 1275 ntBASIC24.5■■□□□ 1.51
DDX39AO00148 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC24.5■■□□□ 1.51
DDX39AO00148 DUX4L6-201ENST00000626483 1275 ntBASIC24.5■■□□□ 1.51
DDX39AO00148 DUX4L1-201ENST00000627662 1275 ntBASIC24.5■■□□□ 1.51
DDX39AO00148 DUX4L8-201ENST00000629013 1275 ntBASIC24.5■■□□□ 1.51
DDX39AO00148 DUX4L3-201ENST00000630187 1275 ntBASIC24.5■■□□□ 1.51
DDX39AO00148 DUX4L7-201ENST00000630678 1275 ntBASIC24.5■■□□□ 1.51
DDX39AO00148 DUX4L5-201ENST00000630834 1275 ntBASIC24.5■■□□□ 1.51
DDX39AO00148 AL133516.1-201ENST00000633012 540 ntTSL 5 BASIC24.5■■□□□ 1.51
DDX39AO00148 ARRDC1-AS1-203ENST00000623970 2210 ntTSL 5 BASIC24.5■■□□□ 1.51
DDX39AO00148 KREMEN2-204ENST00000572045 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC24.5■■□□□ 1.51
DDX39AO00148 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC24.5■■□□□ 1.51
DDX39AO00148 MFSD7-203ENST00000404286 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC24.49■■□□□ 1.51
DDX39AO00148 PYY-201ENST00000360085 1053 ntAPPRIS P2 TSL 1 (best) BASIC24.49■■□□□ 1.51
DDX39AO00148 ZNF696-205ENST00000521537 705 ntTSL 2 BASIC24.49■■□□□ 1.51
DDX39AO00148 CCDC92B-201ENST00000575506 885 ntBASIC24.49■■□□□ 1.51
DDX39AO00148 AVPR2-203ENST00000370049 1307 ntTSL 1 (best) BASIC24.49■■□□□ 1.51
DDX39AO00148 THRA-201ENST00000264637 2538 ntTSL 1 (best) BASIC24.48■■□□□ 1.51
DDX39AO00148 NRG2-201ENST00000289409 2535 ntAPPRIS ALT2 TSL 5 BASIC24.48■■□□□ 1.51
DDX39AO00148 PRR25-201ENST00000301698 1209 ntAPPRIS P1 TSL 1 (best) BASIC24.48■■□□□ 1.51
DDX39AO00148 TESC-201ENST00000335209 1041 ntAPPRIS P1 TSL 1 (best) BASIC24.48■■□□□ 1.51
DDX39AO00148 GADD45A-201ENST00000370985 803 ntTSL 1 (best) BASIC24.48■■□□□ 1.51
DDX39AO00148 EIF6-203ENST00000374450 1289 ntAPPRIS P1 TSL 1 (best) BASIC24.48■■□□□ 1.51
DDX39AO00148 CENPVL3-201ENST00000417339 864 ntAPPRIS P1 BASIC24.48■■□□□ 1.51
DDX39AO00148 CDCP1-202ENST00000425231 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC24.48■■□□□ 1.51
DDX39AO00148 AC123595.1-201ENST00000440769 1046 ntBASIC24.48■■□□□ 1.51
DDX39AO00148 AC093817.1-201ENST00000507296 812 ntTSL 3 BASIC24.48■■□□□ 1.51
DDX39AO00148 ELANE-202ENST00000590230 1028 ntAPPRIS P1 TSL 5 BASIC24.48■■□□□ 1.51
DDX39AO00148 FOXA2-201ENST00000377115 2401 ntAPPRIS P3 TSL 1 (best) BASIC24.47■■□□□ 1.51
DDX39AO00148 HADH-201ENST00000309522 1912 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
DDX39AO00148 BASP1-203ENST00000616743 1711 ntAPPRIS P1 TSL 3 BASIC24.47■■□□□ 1.51
DDX39AO00148 CRB3-202ENST00000356762 733 ntAPPRIS P4 TSL 1 (best) BASIC24.47■■□□□ 1.51
DDX39AO00148 RNF208-201ENST00000391553 1077 ntAPPRIS P1 BASIC24.47■■□□□ 1.51
DDX39AO00148 LINC01678-201ENST00000411694 863 ntTSL 5 BASIC24.47■■□□□ 1.51
DDX39AO00148 AC034268.1-201ENST00000441047 882 ntBASIC24.47■■□□□ 1.51
DDX39AO00148 TSEN15-207ENST00000533373 618 ntTSL 2 BASIC24.47■■□□□ 1.51
DDX39AO00148 AC145207.2-202ENST00000576554 565 ntTSL 5 BASIC24.47■■□□□ 1.51
DDX39AO00148 ARRDC2-202ENST00000379656 2528 ntTSL 2 BASIC24.47■■□□□ 1.51
DDX39AO00148 DOC2A-218ENST00000616445 2065 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
DDX39AO00148 SLC9A3-201ENST00000264938 2584 ntAPPRIS P3 TSL 1 (best) BASIC24.47■■□□□ 1.51
DDX39AO00148 TARSL2-207ENST00000615656 2356 ntAPPRIS ALT2 TSL 5 BASIC24.46■■□□□ 1.51
DDX39AO00148 STOML1-201ENST00000316900 2169 ntTSL 2 BASIC24.46■■□□□ 1.51
DDX39AO00148 ASPSCR1-201ENST00000306729 2123 ntAPPRIS ALT2 TSL 2 BASIC24.46■■□□□ 1.51
DDX39AO00148 PNRC1-201ENST00000336032 2065 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
DDX39AO00148 LINC02228-203ENST00000641970 1355 ntBASIC24.46■■□□□ 1.51
DDX39AO00148 GRK4-206ENST00000504933 1971 ntTSL 1 (best) BASIC24.46■■□□□ 1.51
DDX39AO00148 AC012313.1-203ENST00000597980 570 ntTSL 4 BASIC24.46■■□□□ 1.51
DDX39AO00148 AC092666.2-201ENST00000613287 246 ntBASIC24.46■■□□□ 1.51
DDX39AO00148 NOXO1-201ENST00000354249 1618 ntTSL 1 (best) BASIC24.46■■□□□ 1.51
DDX39AO00148 EIF3J-202ENST00000424492 1550 ntTSL 4 BASIC24.46■■□□□ 1.51
DDX39AO00148 NHLH1-201ENST00000302101 2563 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
DDX39AO00148 UQCR11-203ENST00000591899 1324 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.5
DDX39AO00148 MIR31HG-201ENST00000304425 745 ntTSL 2 BASIC24.45■■□□□ 1.5
DDX39AO00148 URAD-201ENST00000332715 931 ntAPPRIS P1 TSL 5 BASIC24.45■■□□□ 1.5
DDX39AO00148 PRELID2-201ENST00000334744 2140 ntTSL 2 BASIC24.45■■□□□ 1.5
DDX39AO00148 SPOCK2-203ENST00000412663 1284 ntTSL 5 BASIC24.45■■□□□ 1.5
DDX39AO00148 TUSC3-209ENST00000509380 1266 ntTSL 5 BASIC24.45■■□□□ 1.5
DDX39AO00148 SLC25A45-206ENST00000526432 894 ntTSL 1 (best) BASIC24.45■■□□□ 1.5
DDX39AO00148 KRT18P14-201ENST00000534205 1250 ntBASIC24.45■■□□□ 1.5
DDX39AO00148 WRAP73-201ENST00000270708 1665 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.5
DDX39AO00148 AP006623.1-201ENST00000506172 2061 ntTSL 5 BASIC24.45■■□□□ 1.5
DDX39AO00148 NPEPL1-201ENST00000356091 2378 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.5
DDX39AO00148 ACTR1B-201ENST00000289228 2243 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.5
DDX39AO00148 MTCH2-201ENST00000302503 2587 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.5
DDX39AO00148 BARX2-201ENST00000281437 1813 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.5
DDX39AO00148 DCAF8-211ENST00000475733 1426 ntTSL 1 (best) BASIC24.44■■□□□ 1.5
DDX39AO00148 ASL-203ENST00000380839 1765 ntTSL 5 BASIC24.44■■□□□ 1.5
DDX39AO00148 LRRC34-201ENST00000446859 1718 ntAPPRIS ALT2 TSL 2 BASIC24.44■■□□□ 1.5
DDX39AO00148 AC087742.1-201ENST00000575880 1738 ntBASIC24.44■■□□□ 1.5
DDX39AO00148 STX18-205ENST00000505286 1380 ntTSL 1 (best) BASIC24.44■■□□□ 1.5
DDX39AO00148 NPTXR-201ENST00000333039 5784 ntAPPRIS ALT2 TSL 1 (best) BASIC24.44■■□□□ 1.5
DDX39AO00148 RANBP10-206ENST00000602677 2374 ntTSL 5 BASIC24.44■■□□□ 1.5
DDX39AO00148 C1orf229-201ENST00000623686 2258 ntBASIC24.44■■□□□ 1.5
DDX39AO00148 LY6E-201ENST00000292494 1181 ntAPPRIS P2 TSL 1 (best) BASIC24.44■■□□□ 1.5
DDX39AO00148 MPC1-202ENST00000360961 962 ntAPPRIS P2 TSL 5 BASIC24.44■■□□□ 1.5
DDX39AO00148 PPCS-202ENST00000372560 793 ntTSL 1 (best) BASIC24.44■■□□□ 1.5
DDX39AO00148 LINC01942-201ENST00000521373 513 ntTSL 4 BASIC24.44■■□□□ 1.5
DDX39AO00148 ATOX1-207ENST00000524142 749 ntAPPRIS P1 TSL 5 BASIC24.44■■□□□ 1.5
DDX39AO00148 CTAG1A-201ENST00000593606 993 ntTSL 5 BASIC24.44■■□□□ 1.5
DDX39AO00148 AL831711.1-201ENST00000636824 569 ntTSL 4 BASIC24.44■■□□□ 1.5
DDX39AO00148 DONSON-201ENST00000303071 2170 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
DDX39AO00148 BX005040.4-201ENST00000637145 1518 ntBASIC24.44■■□□□ 1.5
DDX39AO00148 TMCC2-209ENST00000637895 1455 ntTSL 1 (best) BASIC24.44■■□□□ 1.5
DDX39AO00148 EFCC1-201ENST00000436022 2691 ntAPPRIS P1 TSL 5 BASIC24.43■■□□□ 1.5
Retrieved 100 of 98,524 protein–RNA pairs in 73.5 ms