Protein–RNA interactions for Protein: H3BVE0

BOLA2-SMG1P6, BOLA2-SMG1P6 readthrough (Fragment), humanhuman

Predictions only

Length 249 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BOLA2-SMG1P6H3BVE0 AP004608.1-202ENST00000533390 1863 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
BOLA2-SMG1P6H3BVE0 RCE1-201ENST00000309657 1485 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
BOLA2-SMG1P6H3BVE0 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
BOLA2-SMG1P6H3BVE0 UHRF1BP1L-202ENST00000356828 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
BOLA2-SMG1P6H3BVE0 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC19.01■□□□□ 0.63
BOLA2-SMG1P6H3BVE0 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
BOLA2-SMG1P6H3BVE0 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC19.01■□□□□ 0.63
BOLA2-SMG1P6H3BVE0 MFAP2-202ENST00000375535 1260 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
BOLA2-SMG1P6H3BVE0 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC19.01■□□□□ 0.63
BOLA2-SMG1P6H3BVE0 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC19.01■□□□□ 0.63
BOLA2-SMG1P6H3BVE0 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC19.01■□□□□ 0.63
BOLA2-SMG1P6H3BVE0 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
BOLA2-SMG1P6H3BVE0 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
BOLA2-SMG1P6H3BVE0 DTNBP1-202ENST00000344537 1403 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
BOLA2-SMG1P6H3BVE0 DOK1-201ENST00000233668 2555 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
BOLA2-SMG1P6H3BVE0 SYT7-202ENST00000535826 1621 ntTSL 5 BASIC19■□□□□ 0.63
BOLA2-SMG1P6H3BVE0 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC19■□□□□ 0.63
BOLA2-SMG1P6H3BVE0 MARK2-209ENST00000509502 2862 ntAPPRIS ALT2 TSL 2 BASIC19■□□□□ 0.63
BOLA2-SMG1P6H3BVE0 SYT6-209ENST00000610222 1707 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
BOLA2-SMG1P6H3BVE0 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC19■□□□□ 0.63
BOLA2-SMG1P6H3BVE0 CCDC71L-201ENST00000315965 1575 ntAPPRIS ALT2 TSL 5 BASIC19■□□□□ 0.63
BOLA2-SMG1P6H3BVE0 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC19■□□□□ 0.63
BOLA2-SMG1P6H3BVE0 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC19■□□□□ 0.63
BOLA2-SMG1P6H3BVE0 ME2-218ENST00000640965 2476 ntTSL 5 BASIC19■□□□□ 0.63
BOLA2-SMG1P6H3BVE0 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
BOLA2-SMG1P6H3BVE0 CCND3-223ENST00000616010 2047 ntTSL 5 BASIC19■□□□□ 0.63
BOLA2-SMG1P6H3BVE0 GKAP1-202ENST00000376365 1511 ntTSL 1 (best) BASIC19■□□□□ 0.63
BOLA2-SMG1P6H3BVE0 LDHB-203ENST00000396076 1538 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
BOLA2-SMG1P6H3BVE0 KCNH2-201ENST00000262186 4286 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
BOLA2-SMG1P6H3BVE0 ZNF74-202ENST00000400451 3159 ntAPPRIS P2 TSL 1 (best) BASIC18.99■□□□□ 0.63
BOLA2-SMG1P6H3BVE0 GATM-201ENST00000396659 2597 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
BOLA2-SMG1P6H3BVE0 CD8A-202ENST00000352580 1977 ntAPPRIS ALT2 TSL 2 BASIC18.99■□□□□ 0.63
BOLA2-SMG1P6H3BVE0 C12orf75-201ENST00000443585 1366 ntAPPRIS P1 TSL 2 BASIC18.99■□□□□ 0.63
BOLA2-SMG1P6H3BVE0 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC18.99■□□□□ 0.63
BOLA2-SMG1P6H3BVE0 EVX1-202ENST00000496902 2955 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
BOLA2-SMG1P6H3BVE0 SLC35F4-206ENST00000556826 1908 ntAPPRIS P1 TSL 5 BASIC18.99■□□□□ 0.63
BOLA2-SMG1P6H3BVE0 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
BOLA2-SMG1P6H3BVE0 CCSAP-203ENST00000366687 5089 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
BOLA2-SMG1P6H3BVE0 FAM217A-201ENST00000274673 2265 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
BOLA2-SMG1P6H3BVE0 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC18.99■□□□□ 0.63
BOLA2-SMG1P6H3BVE0 EI24-212ENST00000615917 1407 ntTSL 2 BASIC18.99■□□□□ 0.63
BOLA2-SMG1P6H3BVE0 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC18.99■□□□□ 0.63
BOLA2-SMG1P6H3BVE0 TLK2-203ENST00000346027 3449 ntAPPRIS P3 TSL 1 (best) BASIC18.99■□□□□ 0.63
BOLA2-SMG1P6H3BVE0 FAM3A-208ENST00000419205 1763 ntTSL 2 BASIC18.98■□□□□ 0.63
BOLA2-SMG1P6H3BVE0 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
BOLA2-SMG1P6H3BVE0 AC005082.1-201ENST00000413042 2259 ntBASIC18.98■□□□□ 0.63
BOLA2-SMG1P6H3BVE0 IMPDH1-214ENST00000496200 2283 ntTSL 2 BASIC18.98■□□□□ 0.63
BOLA2-SMG1P6H3BVE0 TMEM214-201ENST00000238788 2990 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
BOLA2-SMG1P6H3BVE0 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC18.98■□□□□ 0.63
BOLA2-SMG1P6H3BVE0 TPTEP1-205ENST00000558085 1738 ntTSL 2 BASIC18.98■□□□□ 0.63
BOLA2-SMG1P6H3BVE0 ZNF696-201ENST00000330143 2795 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
BOLA2-SMG1P6H3BVE0 MIR6090-201ENST00000622481 60 ntBASIC18.98■□□□□ 0.63
BOLA2-SMG1P6H3BVE0 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
BOLA2-SMG1P6H3BVE0 AC244015.2-201ENST00000616358 1861 ntBASIC18.98■□□□□ 0.63
BOLA2-SMG1P6H3BVE0 EI24-201ENST00000278903 2455 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
BOLA2-SMG1P6H3BVE0 STARD3-201ENST00000336308 2132 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
BOLA2-SMG1P6H3BVE0 LTB4R2-202ENST00000528054 3092 ntBASIC18.98■□□□□ 0.63
BOLA2-SMG1P6H3BVE0 LYSMD2-201ENST00000267838 1759 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
BOLA2-SMG1P6H3BVE0 NABP2-203ENST00000380198 1775 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
BOLA2-SMG1P6H3BVE0 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC18.97■□□□□ 0.63
BOLA2-SMG1P6H3BVE0 TMEM151A-201ENST00000327259 2562 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
BOLA2-SMG1P6H3BVE0 MAPKAPK3-208ENST00000621469 2563 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
BOLA2-SMG1P6H3BVE0 FEM1AP4-201ENST00000443167 1987 ntBASIC18.97■□□□□ 0.63
BOLA2-SMG1P6H3BVE0 DMRT2-201ENST00000259622 2459 ntTSL 2 BASIC18.97■□□□□ 0.63
BOLA2-SMG1P6H3BVE0 GRK2-201ENST00000308595 3466 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
BOLA2-SMG1P6H3BVE0 SSTR5-201ENST00000293897 1362 ntAPPRIS P1 BASIC18.97■□□□□ 0.63
BOLA2-SMG1P6H3BVE0 STMN4-204ENST00000519997 1623 ntTSL 2 BASIC18.97■□□□□ 0.63
BOLA2-SMG1P6H3BVE0 ISLR2-210ENST00000565540 2780 ntAPPRIS P1 TSL 4 BASIC18.97■□□□□ 0.63
BOLA2-SMG1P6H3BVE0 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC18.97■□□□□ 0.63
BOLA2-SMG1P6H3BVE0 KCNC3-203ENST00000477616 3176 ntAPPRIS P2 TSL 1 (best) BASIC18.97■□□□□ 0.63
BOLA2-SMG1P6H3BVE0 AL162393.1-201ENST00000437852 946 ntBASIC18.97■□□□□ 0.63
BOLA2-SMG1P6H3BVE0 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC18.97■□□□□ 0.63
BOLA2-SMG1P6H3BVE0 MTURN-201ENST00000324453 5937 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
BOLA2-SMG1P6H3BVE0 LSM12-201ENST00000293406 2308 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
BOLA2-SMG1P6H3BVE0 RNF212-202ENST00000382968 2335 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
BOLA2-SMG1P6H3BVE0 ATP8A1-207ENST00000510289 2238 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
BOLA2-SMG1P6H3BVE0 C14orf80-203ENST00000354560 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
BOLA2-SMG1P6H3BVE0 NFIB-208ENST00000397581 3318 ntTSL 5 BASIC18.97■□□□□ 0.63
BOLA2-SMG1P6H3BVE0 LONP1-201ENST00000360614 3236 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
BOLA2-SMG1P6H3BVE0 MXRA8-203ENST00000445648 2001 ntTSL 2 BASIC18.96■□□□□ 0.63
BOLA2-SMG1P6H3BVE0 PPP2R5E-204ENST00000555899 2164 ntAPPRIS ALT1 TSL 1 (best) BASIC18.96■□□□□ 0.63
BOLA2-SMG1P6H3BVE0 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
BOLA2-SMG1P6H3BVE0 MAFF-202ENST00000407965 2325 ntAPPRIS P1 TSL 2 BASIC18.96■□□□□ 0.63
BOLA2-SMG1P6H3BVE0 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
BOLA2-SMG1P6H3BVE0 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC18.96■□□□□ 0.63
BOLA2-SMG1P6H3BVE0 MGAT5B-201ENST00000301618 4486 ntAPPRIS P3 TSL 5 BASIC18.96■□□□□ 0.63
BOLA2-SMG1P6H3BVE0 CDK11B-207ENST00000626918 2457 ntTSL 5 BASIC18.96■□□□□ 0.63
BOLA2-SMG1P6H3BVE0 CDK11B-208ENST00000629289 2490 ntTSL 5 BASIC18.96■□□□□ 0.63
BOLA2-SMG1P6H3BVE0 CDK11B-209ENST00000629312 2496 ntTSL 5 BASIC18.96■□□□□ 0.63
BOLA2-SMG1P6H3BVE0 PPP3CC-203ENST00000397775 2094 ntTSL 2 BASIC18.96■□□□□ 0.63
BOLA2-SMG1P6H3BVE0 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC18.96■□□□□ 0.63
BOLA2-SMG1P6H3BVE0 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
BOLA2-SMG1P6H3BVE0 ARMC6-202ENST00000392335 2383 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
BOLA2-SMG1P6H3BVE0 EIF3J-201ENST00000261868 2569 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
BOLA2-SMG1P6H3BVE0 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
BOLA2-SMG1P6H3BVE0 ZNF331-214ENST00000511154 2120 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
BOLA2-SMG1P6H3BVE0 AC133065.2-201ENST00000573379 2147 ntTSL 2 BASIC18.95■□□□□ 0.62
BOLA2-SMG1P6H3BVE0 SLC35D2-203ENST00000375259 1361 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
BOLA2-SMG1P6H3BVE0 UVSSA-207ENST00000511216 2927 ntAPPRIS P2 TSL 1 (best) BASIC18.95■□□□□ 0.62
BOLA2-SMG1P6H3BVE0 BLOC1S3-201ENST00000433642 2601 ntAPPRIS P1 TSL 2 BASIC18.95■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 35.8 ms