Protein–RNA interactions for Protein: H3BM21

Integrin beta (Fragment), humanhuman

Predictions only

Length 787 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3BM21 AP2S1-203ENST00000593442 636 ntTSL 2 BASIC21.66■■□□□ 1.06
H3BM21 AC004528.2-201ENST00000610701 440 ntTSL 5 BASIC21.66■■□□□ 1.06
H3BM21 POLR2E-214ENST00000619917 932 ntTSL 5 BASIC21.66■■□□□ 1.06
H3BM21 AL133516.1-201ENST00000633012 540 ntTSL 5 BASIC21.66■■□□□ 1.06
H3BM21 STK32C-201ENST00000298630 2086 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
H3BM21 PKM-201ENST00000319622 2717 ntAPPRIS P5 TSL 2 BASIC21.66■■□□□ 1.06
H3BM21 PEX10-204ENST00000507596 1941 ntAPPRIS ALT1 TSL 5 BASIC21.66■■□□□ 1.06
H3BM21 SOX10-201ENST00000360880 2861 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
H3BM21 SOX10-202ENST00000396884 2879 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
H3BM21 UBA5-208ENST00000473651 1513 ntTSL 5 BASIC21.65■■□□□ 1.06
H3BM21 TRIM14-202ENST00000342043 1479 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
H3BM21 TBR1-202ENST00000410035 1454 ntTSL 2 BASIC21.65■■□□□ 1.06
H3BM21 DCAF8-211ENST00000475733 1426 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
H3BM21 MYH7B-209ENST00000618182 6197 ntAPPRIS ALT2 TSL 5 BASIC21.65■■□□□ 1.06
H3BM21 GADD45A-201ENST00000370985 803 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
H3BM21 CENPVL3-201ENST00000417339 864 ntAPPRIS P1 BASIC21.65■■□□□ 1.06
H3BM21 ZFAS1-206ENST00000450535 1075 ntTSL 3 BASIC21.65■■□□□ 1.06
H3BM21 H2AFB3-201ENST00000615853 591 ntAPPRIS P1 BASIC21.65■■□□□ 1.06
H3BM21 AC087239.1-201ENST00000622671 572 ntBASIC21.65■■□□□ 1.06
H3BM21 LEF1-AS1-207ENST00000512637 1675 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
H3BM21 RBM42-203ENST00000588161 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC21.65■■□□□ 1.06
H3BM21 FBXL22-201ENST00000360587 1526 ntAPPRIS P2 TSL 1 (best) BASIC21.65■■□□□ 1.06
H3BM21 UCHL5-201ENST00000367448 1534 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
H3BM21 RANBP10-206ENST00000602677 2374 ntTSL 5 BASIC21.65■■□□□ 1.06
H3BM21 MAPK8IP1P2-201ENST00000580257 1472 ntBASIC21.64■■□□□ 1.06
H3BM21 UTS2R-201ENST00000313135 1357 ntAPPRIS P1 BASIC21.64■■□□□ 1.06
H3BM21 MAP2K5-204ENST00000395476 1689 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
H3BM21 GP9-201ENST00000307395 889 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
H3BM21 UBE2J2-203ENST00000360466 1047 ntAPPRIS P1 TSL 2 BASIC21.64■■□□□ 1.05
H3BM21 RNF208-201ENST00000391553 1077 ntAPPRIS P1 BASIC21.64■■□□□ 1.05
H3BM21 RNF208-202ENST00000392827 1135 ntAPPRIS P1 TSL 5 BASIC21.64■■□□□ 1.05
H3BM21 GXYLT1P2-201ENST00000433312 1230 ntBASIC21.64■■□□□ 1.05
H3BM21 SLC35A3-213ENST00000638988 1286 ntTSL 5 BASIC21.64■■□□□ 1.05
H3BM21 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC21.64■■□□□ 1.05
H3BM21 AC098864.1-205ENST00000315302 2260 ntTSL 2 BASIC21.64■■□□□ 1.05
H3BM21 CACTIN-AS1-201ENST00000592274 1913 ntTSL 2 BASIC21.64■■□□□ 1.05
H3BM21 VGLL2-201ENST00000326274 2212 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
H3BM21 ARRDC1-AS1-203ENST00000623970 2210 ntTSL 5 BASIC21.64■■□□□ 1.05
H3BM21 BBC3-202ENST00000341983 1538 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
H3BM21 ME2-208ENST00000638937 2471 ntTSL 5 BASIC21.64■■□□□ 1.05
H3BM21 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC21.63■■□□□ 1.05
H3BM21 GPIHBP1-201ENST00000622500 2282 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
H3BM21 C9orf163-202ENST00000624034 2573 ntBASIC21.63■■□□□ 1.05
H3BM21 HSD17B14-201ENST00000263278 1238 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
H3BM21 GZMM-201ENST00000264553 940 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
H3BM21 AC012313.1-204ENST00000444227 462 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
H3BM21 TERF1P2-201ENST00000583350 1212 ntBASIC21.63■■□□□ 1.05
H3BM21 LGI4-206ENST00000591633 1113 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
H3BM21 SPOCK3-222ENST00000512681 1457 ntTSL 2 BASIC21.63■■□□□ 1.05
H3BM21 NKX6-3-202ENST00000524115 1683 ntTSL 2 BASIC21.63■■□□□ 1.05
H3BM21 PLEKHF1-204ENST00000592810 1357 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
H3BM21 DACT1-201ENST00000335867 2571 ntAPPRIS P3 TSL 1 (best) BASIC21.62■■□□□ 1.05
H3BM21 PIKFYVE-203ENST00000392202 2039 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
H3BM21 AC096677.1-201ENST00000454651 1516 ntTSL 2 BASIC21.62■■□□□ 1.05
H3BM21 KLHL36-201ENST00000258157 1974 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
H3BM21 BCL2L12-201ENST00000246784 990 ntAPPRIS ALT2 TSL 1 (best) BASIC21.62■■□□□ 1.05
H3BM21 SLC35A2-205ENST00000376529 865 ntTSL 3 BASIC21.62■■□□□ 1.05
H3BM21 MOSPD3-202ENST00000379527 1016 ntAPPRIS P1 TSL 5 BASIC21.62■■□□□ 1.05
H3BM21 ASMT-202ENST00000381233 989 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
H3BM21 AC084116.4-201ENST00000524320 484 ntTSL 2 BASIC21.62■■□□□ 1.05
H3BM21 AC061979.1-201ENST00000532061 434 ntTSL 5 BASIC21.62■■□□□ 1.05
H3BM21 KCNQ4-204ENST00000509682 1926 ntAPPRIS ALT2 TSL 5 BASIC21.62■■□□□ 1.05
H3BM21 HSF1-201ENST00000400780 2105 ntTSL 5 BASIC21.62■■□□□ 1.05
H3BM21 CADPS-219ENST00000612439 5455 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
H3BM21 SPI1-202ENST00000378538 1403 ntAPPRIS P3 TSL 1 (best) BASIC21.62■■□□□ 1.05
H3BM21 FAM185A-201ENST00000409231 1446 ntAPPRIS ALT2 TSL 2 BASIC21.62■■□□□ 1.05
H3BM21 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC21.62■■□□□ 1.05
H3BM21 CACNB1-203ENST00000394310 1753 ntAPPRIS ALT1 TSL 1 (best) BASIC21.61■■□□□ 1.05
H3BM21 GLI4-201ENST00000340042 1341 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
H3BM21 GSR-204ENST00000537535 1323 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
H3BM21 IMPA2-201ENST00000269159 1534 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
H3BM21 RNF4-207ENST00000506706 2098 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
H3BM21 CTNNAL1-202ENST00000374593 761 ntTSL 3 BASIC21.61■■□□□ 1.05
H3BM21 TNFRSF18-202ENST00000379265 705 ntAPPRIS ALT2 TSL 1 (best) BASIC21.61■■□□□ 1.05
H3BM21 PYCR3-203ENST00000433751 1000 ntAPPRIS ALT2 TSL 2 BASIC21.61■■□□□ 1.05
H3BM21 AC080013.1-202ENST00000465477 674 ntTSL 5 BASIC21.61■■□□□ 1.05
H3BM21 ZNF302-209ENST00000507959 854 ntTSL 2 BASIC21.61■■□□□ 1.05
H3BM21 NTF6G-201ENST00000591094 616 ntBASIC21.61■■□□□ 1.05
H3BM21 IKBKGP1-201ENST00000612193 1073 ntBASIC21.61■■□□□ 1.05
H3BM21 IMPA2-212ENST00000625802 500 ntTSL 2 BASIC21.61■■□□□ 1.05
H3BM21 C7orf25-203ENST00000431882 1645 ntTSL 2 BASIC21.61■■□□□ 1.05
H3BM21 RELL2-205ENST00000518856 1419 ntTSL 5 BASIC21.61■■□□□ 1.05
H3BM21 PICK1-202ENST00000404072 2164 ntAPPRIS P1 TSL 2 BASIC21.61■■□□□ 1.05
H3BM21 CUEDC1-202ENST00000407144 2190 ntAPPRIS P1 TSL 5 BASIC21.61■■□□□ 1.05
H3BM21 MAGI2-201ENST00000354212 6880 ntAPPRIS P3 TSL 1 (best) BASIC21.61■■□□□ 1.05
H3BM21 RGS6-209ENST00000553525 2005 ntAPPRIS ALT1 TSL 2 BASIC21.6■■□□□ 1.05
H3BM21 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC21.6■■□□□ 1.05
H3BM21 ATE1-AS1-201ENST00000437593 951 ntTSL 2 BASIC21.6■■□□□ 1.05
H3BM21 YJEFN3-203ENST00000514277 995 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
H3BM21 ZFPL1-203ENST00000525509 478 ntTSL 2 BASIC21.6■■□□□ 1.05
H3BM21 TANGO2-201ENST00000327374 2273 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
H3BM21 OLIG1-201ENST00000382348 2277 ntAPPRIS P1 BASIC21.6■■□□□ 1.05
H3BM21 GALK1-201ENST00000225614 1445 ntAPPRIS P1 TSL 2 BASIC21.6■■□□□ 1.05
H3BM21 KLC1-227ENST00000634686 2229 ntTSL 5 BASIC21.6■■□□□ 1.05
H3BM21 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC21.6■■□□□ 1.05
H3BM21 TALDO1-201ENST00000319006 1346 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
H3BM21 ZNF517-207ENST00000531720 1615 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
H3BM21 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC21.59■■□□□ 1.05
H3BM21 ASF1B-201ENST00000263382 2059 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
H3BM21 AL137002.2-201ENST00000639766 2238 ntTSL 5 BASIC21.59■■□□□ 1.05
Retrieved 100 of 98,524 protein–RNA pairs in 48.3 ms