Protein–RNA interactions for Protein: E9PGA6

C1QTNF3-AMACR, C1QTNF3-AMACR readthrough (NMD candidate), humanhuman

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C1QTNF3-AMACRE9PGA6 AL137784.2-201ENST00000607332 1000 ntBASIC21.86■■□□□ 1.09
C1QTNF3-AMACRE9PGA6 IGF2-AS-201ENST00000381361 2063 ntTSL 2 BASIC21.86■■□□□ 1.09
C1QTNF3-AMACRE9PGA6 SAXO1-201ENST00000380530 1727 ntAPPRIS ALT2 TSL 2 BASIC21.86■■□□□ 1.09
C1QTNF3-AMACRE9PGA6 BASP1-203ENST00000616743 1711 ntAPPRIS P1 TSL 3 BASIC21.86■■□□□ 1.09
C1QTNF3-AMACRE9PGA6 RAB28-208ENST00000630951 1679 ntTSL 5 BASIC21.85■■□□□ 1.09
C1QTNF3-AMACRE9PGA6 MFSD7-203ENST00000404286 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC21.85■■□□□ 1.09
C1QTNF3-AMACRE9PGA6 MME-202ENST00000382989 1319 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
C1QTNF3-AMACRE9PGA6 MAIP1-201ENST00000295079 1495 ntAPPRIS P2 TSL 2 BASIC21.85■■□□□ 1.09
C1QTNF3-AMACRE9PGA6 VGLL4-208ENST00000424529 1025 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
C1QTNF3-AMACRE9PGA6 AC127029.2-201ENST00000577329 502 ntTSL 3 BASIC21.85■■□□□ 1.09
C1QTNF3-AMACRE9PGA6 RASL12-202ENST00000421977 1523 ntTSL 2 BASIC21.85■■□□□ 1.09
C1QTNF3-AMACRE9PGA6 FOSL1-201ENST00000312562 1669 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
C1QTNF3-AMACRE9PGA6 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
C1QTNF3-AMACRE9PGA6 MAP6D1-201ENST00000318631 2111 ntAPPRIS P2 TSL 1 (best) BASIC21.85■■□□□ 1.09
C1QTNF3-AMACRE9PGA6 AL391650.1-201ENST00000448923 1468 ntAPPRIS P1 TSL 2 BASIC21.84■■□□□ 1.09
C1QTNF3-AMACRE9PGA6 HSD11B1L-217ENST00000581521 1884 ntAPPRIS P3 TSL 5 BASIC21.84■■□□□ 1.09
C1QTNF3-AMACRE9PGA6 UBE2D3-201ENST00000321805 1087 ntAPPRIS ALT1 TSL 5 BASIC21.84■■□□□ 1.09
C1QTNF3-AMACRE9PGA6 HIST2H2AC-201ENST00000331380 390 ntAPPRIS P1 BASIC21.84■■□□□ 1.09
C1QTNF3-AMACRE9PGA6 C5orf38-201ENST00000334000 890 ntAPPRIS P3 TSL 1 (best) BASIC21.84■■□□□ 1.09
C1QTNF3-AMACRE9PGA6 CTNNAL1-202ENST00000374593 761 ntTSL 3 BASIC21.84■■□□□ 1.09
C1QTNF3-AMACRE9PGA6 AC140479.5-201ENST00000568189 735 ntTSL 3 BASIC21.84■■□□□ 1.09
C1QTNF3-AMACRE9PGA6 DEAF1-201ENST00000382409 2500 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
C1QTNF3-AMACRE9PGA6 TRAP1-202ENST00000538171 2052 ntTSL 2 BASIC21.84■■□□□ 1.09
C1QTNF3-AMACRE9PGA6 RAB24-202ENST00000303270 1385 ntTSL 2 BASIC21.84■■□□□ 1.09
C1QTNF3-AMACRE9PGA6 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC21.84■■□□□ 1.09
C1QTNF3-AMACRE9PGA6 SLC22A17-201ENST00000206544 2284 ntAPPRIS P4 TSL 1 (best) BASIC21.83■■□□□ 1.09
C1QTNF3-AMACRE9PGA6 PTH1R-201ENST00000313049 2123 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
C1QTNF3-AMACRE9PGA6 GOLGA6L9-202ENST00000618348 1710 ntAPPRIS P1 TSL 5 BASIC21.83■■□□□ 1.09
C1QTNF3-AMACRE9PGA6 AC073343.2-201ENST00000413182 548 ntTSL 4 BASIC21.83■■□□□ 1.09
C1QTNF3-AMACRE9PGA6 AL590128.2-201ENST00000442889 415 ntTSL 3 BASIC21.83■■□□□ 1.09
C1QTNF3-AMACRE9PGA6 AC079089.2-201ENST00000531211 1277 ntBASIC21.83■■□□□ 1.09
C1QTNF3-AMACRE9PGA6 AP003071.3-201ENST00000562506 366 ntTSL 3 BASIC21.83■■□□□ 1.09
C1QTNF3-AMACRE9PGA6 NEDD4L-225ENST00000589054 1033 ntTSL 3 BASIC21.83■■□□□ 1.09
C1QTNF3-AMACRE9PGA6 ASL-203ENST00000380839 1765 ntTSL 5 BASIC21.83■■□□□ 1.09
C1QTNF3-AMACRE9PGA6 MAGI2-201ENST00000354212 6880 ntAPPRIS P3 TSL 1 (best) BASIC21.83■■□□□ 1.08
C1QTNF3-AMACRE9PGA6 BCL2L12-201ENST00000246784 990 ntAPPRIS ALT2 TSL 1 (best) BASIC21.82■■□□□ 1.08
C1QTNF3-AMACRE9PGA6 HBM-201ENST00000356815 506 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
C1QTNF3-AMACRE9PGA6 IL15RA-201ENST00000379971 588 ntTSL 3 BASIC21.82■■□□□ 1.08
C1QTNF3-AMACRE9PGA6 LTC4S-202ENST00000401985 486 ntTSL 3 BASIC21.82■■□□□ 1.08
C1QTNF3-AMACRE9PGA6 IKBKGP1-201ENST00000612193 1073 ntBASIC21.82■■□□□ 1.08
C1QTNF3-AMACRE9PGA6 SYT6-209ENST00000610222 1707 ntAPPRIS P1 TSL 5 BASIC21.82■■□□□ 1.08
C1QTNF3-AMACRE9PGA6 RPS6-203ENST00000380384 1355 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
C1QTNF3-AMACRE9PGA6 HORMAD2-201ENST00000336726 2187 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
C1QTNF3-AMACRE9PGA6 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC21.82■■□□□ 1.08
C1QTNF3-AMACRE9PGA6 ZFAND6-224ENST00000618205 1659 ntAPPRIS P1 TSL 5 BASIC21.82■■□□□ 1.08
C1QTNF3-AMACRE9PGA6 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
C1QTNF3-AMACRE9PGA6 WT1-AS-205ENST00000494911 1320 ntTSL 4 BASIC21.81■■□□□ 1.08
C1QTNF3-AMACRE9PGA6 ILKAP-211ENST00000612675 1335 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
C1QTNF3-AMACRE9PGA6 PARD3-209ENST00000374790 5825 ntTSL 5 BASIC21.81■■□□□ 1.08
C1QTNF3-AMACRE9PGA6 NPY4R-201ENST00000374312 1956 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
C1QTNF3-AMACRE9PGA6 NPY4R2-201ENST00000576178 1956 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
C1QTNF3-AMACRE9PGA6 AC009237.3-201ENST00000393279 1427 ntBASIC21.81■■□□□ 1.08
C1QTNF3-AMACRE9PGA6 P4HA3-201ENST00000331597 2274 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
C1QTNF3-AMACRE9PGA6 COX20-201ENST00000366528 568 ntTSL 2 BASIC21.81■■□□□ 1.08
C1QTNF3-AMACRE9PGA6 LRRC3C-201ENST00000377924 891 ntAPPRIS P1 TSL 3 BASIC21.81■■□□□ 1.08
C1QTNF3-AMACRE9PGA6 GALNS-213ENST00000569433 723 ntTSL 3 BASIC21.81■■□□□ 1.08
C1QTNF3-AMACRE9PGA6 PDCD5-204ENST00000586035 601 ntTSL 3 BASIC21.81■■□□□ 1.08
C1QTNF3-AMACRE9PGA6 AC007773.1-201ENST00000592680 972 ntTSL 2 BASIC21.81■■□□□ 1.08
C1QTNF3-AMACRE9PGA6 AUTS2-203ENST00000406775 5950 ntAPPRIS ALT2 TSL 1 (best) BASIC21.81■■□□□ 1.08
C1QTNF3-AMACRE9PGA6 HSPB2-201ENST00000304298 1335 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
C1QTNF3-AMACRE9PGA6 CYB561D2-205ENST00000425346 1319 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
C1QTNF3-AMACRE9PGA6 ENTPD5-206ENST00000556242 1437 ntTSL 5 BASIC21.8■■□□□ 1.08
C1QTNF3-AMACRE9PGA6 AC138649.1-201ENST00000619611 1449 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
C1QTNF3-AMACRE9PGA6 ID4-201ENST00000378700 2344 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
C1QTNF3-AMACRE9PGA6 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC21.8■■□□□ 1.08
C1QTNF3-AMACRE9PGA6 NFKBIB-201ENST00000313582 1159 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
C1QTNF3-AMACRE9PGA6 AC092468.1-201ENST00000491321 562 ntTSL 4 BASIC21.8■■□□□ 1.08
C1QTNF3-AMACRE9PGA6 AC011825.4-201ENST00000582233 473 ntTSL 2 BASIC21.8■■□□□ 1.08
C1QTNF3-AMACRE9PGA6 CPT2-209ENST00000636935 803 ntTSL 5 BASIC21.8■■□□□ 1.08
C1QTNF3-AMACRE9PGA6 KCNQ3-202ENST00000519445 2801 ntAPPRIS ALT2 TSL 5 BASIC21.8■■□□□ 1.08
C1QTNF3-AMACRE9PGA6 TMEM44-202ENST00000347147 2245 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
C1QTNF3-AMACRE9PGA6 PCYT2-201ENST00000331285 2147 ntTSL 2 BASIC21.8■■□□□ 1.08
C1QTNF3-AMACRE9PGA6 CCDC151-203ENST00000591179 1943 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
C1QTNF3-AMACRE9PGA6 CLEC14A-201ENST00000342213 2267 ntAPPRIS P1 BASIC21.8■■□□□ 1.08
C1QTNF3-AMACRE9PGA6 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC21.79■■□□□ 1.08
C1QTNF3-AMACRE9PGA6 GNB2-209ENST00000436220 1479 ntTSL 5 BASIC21.79■■□□□ 1.08
C1QTNF3-AMACRE9PGA6 FMR1-AS1-201ENST00000594922 2005 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
C1QTNF3-AMACRE9PGA6 PGF-206ENST00000555567 1927 ntAPPRIS P3 TSL 1 (best) BASIC21.79■■□□□ 1.08
C1QTNF3-AMACRE9PGA6 GATA3-AS1-204ENST00000438755 675 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
C1QTNF3-AMACRE9PGA6 AC079140.4-201ENST00000507448 529 ntBASIC21.79■■□□□ 1.08
C1QTNF3-AMACRE9PGA6 AC104986.2-201ENST00000521696 380 ntTSL 2 BASIC21.79■■□□□ 1.08
C1QTNF3-AMACRE9PGA6 ZFPL1-203ENST00000525509 478 ntTSL 2 BASIC21.79■■□□□ 1.08
C1QTNF3-AMACRE9PGA6 C17orf49-202ENST00000546495 996 ntAPPRIS ALT1 TSL 2 BASIC21.79■■□□□ 1.08
C1QTNF3-AMACRE9PGA6 AC012414.4-201ENST00000560839 1074 ntTSL 5 BASIC21.79■■□□□ 1.08
C1QTNF3-AMACRE9PGA6 GABARAPL2-205ENST00000568455 646 ntTSL 3 BASIC21.79■■□□□ 1.08
C1QTNF3-AMACRE9PGA6 AC060814.5-201ENST00000630916 1074 ntTSL 2 BASIC21.79■■□□□ 1.08
C1QTNF3-AMACRE9PGA6 DAZAP1-201ENST00000233078 2160 ntAPPRIS P2 TSL 1 (best) BASIC21.79■■□□□ 1.08
C1QTNF3-AMACRE9PGA6 DYRK3-203ENST00000367109 2163 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
C1QTNF3-AMACRE9PGA6 MBNL3-202ENST00000370844 1643 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
C1QTNF3-AMACRE9PGA6 MAP3K3-210ENST00000584573 2480 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
C1QTNF3-AMACRE9PGA6 STK32C-201ENST00000298630 2086 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
C1QTNF3-AMACRE9PGA6 KCNQ5-208ENST00000414165 6236 ntTSL 5 BASIC21.78■■□□□ 1.08
C1QTNF3-AMACRE9PGA6 SSUH2-217ENST00000544814 1636 ntAPPRIS ALT2 TSL 2 BASIC21.78■■□□□ 1.08
C1QTNF3-AMACRE9PGA6 UCHL1-201ENST00000284440 1172 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
C1QTNF3-AMACRE9PGA6 PGAP3-204ENST00000429199 970 ntTSL 2 BASIC21.78■■□□□ 1.08
C1QTNF3-AMACRE9PGA6 UCHL1-210ENST00000512788 785 ntTSL 3 BASIC21.78■■□□□ 1.08
C1QTNF3-AMACRE9PGA6 TMEM182-210ENST00000639249 1025 ntTSL 5 BASIC21.78■■□□□ 1.08
C1QTNF3-AMACRE9PGA6 DVL1-201ENST00000378888 3239 ntAPPRIS ALT1 TSL 5 BASIC21.78■■□□□ 1.08
C1QTNF3-AMACRE9PGA6 LDB1-201ENST00000361198 2285 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
C1QTNF3-AMACRE9PGA6 DOC2A-218ENST00000616445 2065 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Retrieved 100 of 98,524 protein–RNA pairs in 16.7 ms